Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02468 and BL02975
See
Amino acid alignment /
Visit
BSNT_02468 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence dna-align/BSNT_02468.1.5803.seq
# -bsequence dna-align/BL02975___ftsW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02468-BL02975___ftsW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02468-BL02975___ftsW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02468
# 2: BL02975___ftsW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1267
# Identity: 760/1267 (60.0%)
# Similarity: 760/1267 (60.0%)
# Gaps: 254/1267 (20.0%)
# Score: 2449.5
#
#
#=======================================
BSNT_02468 0 -------------------------------------------------- 0
BL02975___fts 1 ATGATAAAAAGAATGCTCAAATCCTATGATTATTCATTAATCTTCGCTGT 50
BSNT_02468 0 -------------------------------------------------- 0
BL02975___fts 51 ATTCCTGCTGTGCGGGTTCGGGCTCGTCATGGTGTACAGTTCAAGCATGA 100
BSNT_02468 1 -----------------------------------------------ATG 3
|
BL02975___fts 101 TCACGGCCGTGACAAGGTACGGACAAAACAGCAGCTACTTTTTTGACA-- 148
BSNT_02468 4 CGGCAGCTGTTTGCTTTAATTGCGGGTGGCGCTC------------TATT 41
|||||||| .||.||| |||||||| |.||
BL02975___fts 149 -GGCAGCTG-ATGTTTT---------TGGCGCTCGGAACCGTCATATTTT 187
BSNT_02468 42 TATTCTCATGGCGTTGTTTCCTTATAAAGCACTGGCCCATCAAAAGTTTC 91
|||.|.| ||||.|.|||||.|||||.||..|.|||.|||||||.||.|
BL02975___fts 188 TATGCGC--GGCGCTTTTTCCGTATAAGGCTTTTGCCAATCAAAAATTCC 235
BSNT_02468 92 AGAAGGGGATACTGCTTGTATCTGTTCTCGCGCTTATCTCACTGTTTGTT 141
|.|||....|.|||||..|.||.||..||||..|..||...|||||||||
BL02975___fts 236 AAAAGTTTTTGCTGCTCATTTCCGTCGTCGCTTTGTTCGGGCTGTTTGTT 285
BSNT_02468 142 TTCGGGCATGTTGCCGGAAACGCGCAGAGCTGGTTTAAAATCGGCG---- 187
.||||.|||||.|||||.||.||.||.||||||| ||.|.|
BL02975___fts 286 GTCGGACATGTGGCCGGGAATGCCCAAAGCTGGT------TCAGGGTTTC 329
BSNT_02468 188 GAATGA--GTATTCAGCCGGGGGAGTTTGTGAAACTGGTCGTGATTTTAT 235
||||.| |.||.|||||||||||||||||.||.|||..|||.||.||.|
BL02975___fts 330 GAATTACGGCATCCAGCCGGGGGAGTTTGTCAAGCTGACCGTCATCTTGT 379
BSNT_02468 236 ACCTTGCAGCCGTATATGCAAAAAAACAAAGTTATATCGACCATCTGTTA 285
|.|||.|..||||.||.||.|||||.|||||.|||||.|||.|..||..|
BL02975___fts 380 ATCTTTCTTCCGTCTACGCCAAAAAGCAAAGCTATATTGACAACTTGGGA 429
BSNT_02468 286 ACGGGAGTAGCCCCTCCGGTAGTCATGACGCTTATAATTTGCGGGTTAAT 335
.|.|||.|.||||||||.|...||||.|||||..|.|||||||..||..|
BL02975___fts 430 GCCGGAATCGCCCCTCCTGCGATCATCACGCTCTTCATTTGCGCCTTGGT 479
BSNT_02468 336 TGCCATG--CAGCCAGATTTCGGTACAGCCATGATTATAGGGTTAATTGC 383
.|| || |||||.|||.|.||.||.|||.|.||.||.|..|||||.||
BL02975___fts 480 CGC--TGCTCAGCCGGATGTGGGAACGGCCTTTATCATCGCTTTAATCGC 527
BSNT_02468 384 GACGTGCATGATCTTGTGCTCCGGCTTCAGCGGAAAGACGCTGGTGAGGC 433
...||||||.||.||||||||.||.||||||||.||.||||||.|.|.||
BL02975___fts 528 ATTGTGCATCATTTTGTGCTCGGGATTCAGCGGCAAAACGCTGTTAAAGC 577
BSNT_02468 434 ---TGCTTTTGCTCGGCGGAATTGTTTTCATTTTAGTCAGCCCGATCCTC 480
|||||||| |.|||.|||||..|..|..|.|||||||||.||.|.
BL02975___fts 578 TCGTGCTTTTG---GCCGGGATTGTCCTTGTGCTCGTCAGCCCGCTCATT 624
BSNT_02468 481 TATTTAAATCAGGATCA-AATTTTAACTAAAGGCCGTTTGGCGCGTTTTG 529
|||||.|| |.||..|| .||||||||..||||.||..||..|||.||||
BL02975___fts 625 TATTTCAA-CTGGGACAGCATTTTAACAGAAGGACGGATGAAGCGGTTTG 673
BSNT_02468 530 AGAGTCT-TGAAGACCCATTTAAGTATGC---AAATTCATCAGGTTTGCA 575
|.|| || |.||.||||.|||||..|||| |.|| ||.||.||.||
BL02975___fts 674 AAAG-CTATCAAAACCCGTTTAAAGATGCGGGAGAT---TCGGGCTTTCA 719
BSNT_02468 576 AGTGGTCAATTCTTATTATGCGATCAGCTCAGGCGGCATTTTCGGCCTGG 625
|||.|||||.||.||.|..||||||.|.||.||.||..|.||||||||||
BL02975___fts 720 AGTCGTCAACTCCTACTTGGCGATCGGTTCCGGGGGACTGTTCGGCCTGG 769
BSNT_02468 626 GGCTCGGTGAAAGTATCCAAAAATACGGATATCTGCCTGAATCACACACT 675
|.|||||.||.||..||||.||.||.||.||||||||||||.|.|||||.
BL02975___fts 770 GCCTCGGCGAGAGCGTCCAGAAGTATGGGTATCTGCCTGAAACGCACACC 819
BSNT_02468 676 GACTTTATTATGGCTGTCATTGCTGAAGAGCTCGGCATTTTTGGGGTATT 725
||.|||||||||||..||||.||.||.||||||||.|||||.||.||..|
BL02975___fts 820 GATTTTATTATGGCGATCATCGCCGAGGAGCTCGGTATTTTCGGTGTCCT 869
BSNT_02468 726 GTTTGTGAT--------TTTCTTATTGGGTTTTGTCGTCATAAAAGGTTT 767
.|||||..| |||| |||..||||..|||||||.||
BL02975___fts 870 TTTTGTCGTGCTGCTGCTTTC--------TTTCATCGTTTTAAAAGGGTT 911
BSNT_02468 768 TTATATTGCCAGAAAATGCGAGGACCCGTTTGGAAGTCTTCTGGCGATCG 817
||||||.||.||.||||||||.||.|||||||||||.||.||.|||||||
BL02975___fts 912 TTATATAGCGAGGAAATGCGATGATCCGTTTGGAAGCCTGCTCGCGATCG 961
BSNT_02468 818 GCATTTCAAGCATGATTGCCGTCCAGTCGTTTATTAACCTTGGCGG--TG 865
||||.||.||||||||.|||.|||||||.||..|.|||||.||||| |.
BL02975___fts 962 GCATATCGAGCATGATCGCCATCCAGTCTTTCGTGAACCTGGGCGGCATA 1011
BSNT_02468 866 TCAGCGGATTAATTCCGATTACAGGGGTTACGCTGCCATTTATCAGTTAT 915
|| |||.||.|||||..|.||||||||.|||||.||.||||||||.||.
BL02975___fts 1012 TC--CGGCTTGATTCCTTTGACAGGGGTGACGCTTCCGTTTATCAGCTAC 1059
BSNT_02468 916 GGGGGCTCTTCTTTAGTGCTGCTGCTGGCAAGTATGGGGATATTAGCGAA 965
||.||.||.||..|..|.||||||.|||||||...|||||||||.|.|||
BL02975___fts 1060 GGAGGGTCATCGCTCATTCTGCTGATGGCAAGCGCGGGGATATTGGTGAA 1109
BSNT_02468 966 TATCAGCATGTTT-GTGAAATATTCAGA------GAATAAGAAAAAGAGA 1008
.|||||||||||| .|| ||||||..|| .|| |.|||| |
BL02975___fts 1110 CATCAGCATGTTTAATG-AATATTTTGATCGGTTCAA-ACGAAA-----A 1152
BSNT_02468 1009 GAGCCTTTGGCGC-------CGAAGGGAATGAAAAAGAAACAGCTCAAAA 1051
.|||||.| | |.|| ||.||||.|.||.||....||||
BL02975___fts 1153 CAGCCTGT----CAATACTACAAA---AACGAAAGAAAATCAATATAAAA 1195
BSNT_02468 1052 AAACTGTTTATCTGTAA 1068
|||.|.|..||.|.|||
BL02975___fts 1196 AAAGTATAAATTTTTAA 1212
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.