Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02454 and BL02969

See Amino acid alignment / Visit BSNT_02454 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_02454___ylaD.1.5803.seq
#    -bsequence dna-align/BL02969___ylaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02454___ylaD-BL02969___ylaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02454___ylaD-BL02969___ylaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02454___ylaD
# 2: BL02969___ylaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity:     189/346 (54.6%)
# Similarity:   189/346 (54.6%)
# Gaps:         101/346 (29.2%)
# Score: 433.0
# 
#
#=======================================

BSNT_02454___      1 ATGACCTGCTTTCTAGTAAGAGACCTGCTTCCTCTGTATCTTGAAGGTGA     50
                     ||||..|||..|||.||||||||..|.||.|||.|.||..|.|||||.||
BL02969___yla      1 ATGAAATGCCATCTTGTAAGAGATTTACTGCCTTTATACATAGAAGGCGA     50

BSNT_02454___     51 TTGTAAAAGAGAAACGGAACACGTTATAGAAG-----CGCATTTAAAAAT     95
                     |||.|...|..|||||||  ||||| |.|..|     |.||||.|.|.||
BL02969___yla     51 TTGCAGCCGCAAAACGGA--ACGTT-TGGTTGCCGCACACATTAAGACAT     97

BSNT_02454___     96 GTGCAGCAGCTGCAGAGACATGTATGACACGATGGCTGAGCC-----ATT    140
                     |.| ||.| .|||.|.||.|||||.||||.||||...||.||     |||
BL02969___yla     98 GCG-AGGA-TTGCCGGGAAATGTACGACATGATGAGGGAACCTGTCAATT    145

BSNT_02454___    141 TGAATTGGAAAGCGAACAGGCCGTTGA-GGAGGCTTATCTGCC---GGAA    186
                     |..||                 |.||| |||||.|    ||||   ||||
BL02969___yla    146 TTCAT-----------------GGTGACGGAGGAT----TGCCAAAGGAA    174

BSNT_02454___    187 ------------GAAGAACTGCGTTTTAAA----CAG---AG-GTACTAT    216
                                 |||||||        |||    |||   || |||.|||
BL02969___yla    175 GCAGAAGAAGCGGAAGAAC--------AAAAGTTCAGGAAAGCGTATTAT    216

BSNT_02454___    217 ----GGATTACTGATCATGAAA---GCTGCCTGCTGGTTTGGAGCGGCGG    259
                         ||    |||||..|.|||   ||.||  ||| |||||  ||||.||
BL02969___yla    217 CAAAGG----CTGATTCTCAAAGGGGCAGC--GCT-GTTTG--GCGGGGG    257

BSNT_02454___    260 ----TTGCCATGATGCTGATCATCAAACTGCTGA-------TATAA    294
                         ||||  |||||||..|.||    .|.||.|       |||||
BL02969___yla    258 CTACTTGC--TGATGCTTTTGAT----TTACTTATTCTTTTTATAA    297


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