Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02454 and BL02969
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02454___ylaD.1.5803.seq
# -bsequence dna-align/BL02969___ylaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02454___ylaD-BL02969___ylaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02454___ylaD-BL02969___ylaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02454___ylaD
# 2: BL02969___ylaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 189/346 (54.6%)
# Similarity: 189/346 (54.6%)
# Gaps: 101/346 (29.2%)
# Score: 433.0
#
#
#=======================================
BSNT_02454___ 1 ATGACCTGCTTTCTAGTAAGAGACCTGCTTCCTCTGTATCTTGAAGGTGA 50
||||..|||..|||.||||||||..|.||.|||.|.||..|.|||||.||
BL02969___yla 1 ATGAAATGCCATCTTGTAAGAGATTTACTGCCTTTATACATAGAAGGCGA 50
BSNT_02454___ 51 TTGTAAAAGAGAAACGGAACACGTTATAGAAG-----CGCATTTAAAAAT 95
|||.|...|..||||||| ||||| |.|..| |.||||.|.|.||
BL02969___yla 51 TTGCAGCCGCAAAACGGA--ACGTT-TGGTTGCCGCACACATTAAGACAT 97
BSNT_02454___ 96 GTGCAGCAGCTGCAGAGACATGTATGACACGATGGCTGAGCC-----ATT 140
|.| ||.| .|||.|.||.|||||.||||.||||...||.|| |||
BL02969___yla 98 GCG-AGGA-TTGCCGGGAAATGTACGACATGATGAGGGAACCTGTCAATT 145
BSNT_02454___ 141 TGAATTGGAAAGCGAACAGGCCGTTGA-GGAGGCTTATCTGCC---GGAA 186
|..|| |.||| |||||.| |||| ||||
BL02969___yla 146 TTCAT-----------------GGTGACGGAGGAT----TGCCAAAGGAA 174
BSNT_02454___ 187 ------------GAAGAACTGCGTTTTAAA----CAG---AG-GTACTAT 216
||||||| ||| ||| || |||.|||
BL02969___yla 175 GCAGAAGAAGCGGAAGAAC--------AAAAGTTCAGGAAAGCGTATTAT 216
BSNT_02454___ 217 ----GGATTACTGATCATGAAA---GCTGCCTGCTGGTTTGGAGCGGCGG 259
|| |||||..|.||| ||.|| ||| ||||| ||||.||
BL02969___yla 217 CAAAGG----CTGATTCTCAAAGGGGCAGC--GCT-GTTTG--GCGGGGG 257
BSNT_02454___ 260 ----TTGCCATGATGCTGATCATCAAACTGCTGA-------TATAA 294
|||| |||||||..|.|| .|.||.| |||||
BL02969___yla 258 CTACTTGC--TGATGCTTTTGAT----TTACTTATTCTTTTTATAA 297
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