Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00357 and BL02964
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00357___ybcI.1.5803.seq
# -bsequence dna-align/BL02964___ybcI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00357___ybcI-BL02964___ybcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00357___ybcI-BL02964___ybcI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00357___ybcI
# 2: BL02964___ybcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 253/401 (63.1%)
# Similarity: 253/401 (63.1%)
# Gaps: 52/401 (13.0%)
# Score: 765.0
#
#
#=======================================
BSNT_00357___ 1 AT--GAAAAA--------GTCGAAGGGTTCTATTGAATCAGAGATCAGTA 40
| |||||| |.|||||||.|||.|.||..|.|||||.||.|
BL02964___ybc 1 -TTGGAAAAACAGAAGGTGACGAAGGGGTCTTTGGAGGCGGAGATAAGCA 49
BSNT_00357___ 41 AGTCCATTACTCAATGGGAGAAGGATTATCTTGGG-CGGGGGTCTGTATC 89
|..||.|.||.||||||||.||.||.||| ||||| ||.||.||.|||||
BL02964___ybc 50 AAGCCTTAACCCAATGGGAAAAAGACTAT-TTGGGACGCGGATCCGTATC 98
BSNT_00357___ 90 TGTTAAGACTGATATACTGCGGGACATGATCATCGTCAATT---TAAAAG 136
||||||.||.|||||..|..|..|.|||.||||||| || |.||.|
BL02964___ybc 99 TGTTAAAACAGATATTATAAGAAATATGGTCATCGT---TTCCCTGAACG 145
BSNT_00357___ 137 GGATTTTAACACCGGCCGAATATGTAGTTTGTGGATCAAAAGAGGGTATG 186
|.|||||.||.||.||||||||.|.|.||||..|..|||||||.||..||
BL02964___ybc 146 GTATTTTGACGCCCGCCGAATACGAACTTTGCAGTACAAAAGAAGGCCTG 195
BSNT_00357___ 187 TTATCTATCAAACAAACTCGTTCGGAGTTAGTCGAATCAGGTATAGA--A 234
.|.||.||.|||..|||.||.||.|..||.||.|||||.|||||||| |
BL02964___ybc 196 CTGTCAATTAAAAGAACCCGCTCCGGTTTGGTGGAATCGGGTATAGAGCA 245
BSNT_00357___ 235 G----GCC------TTAAGGATATTATCTTAAAAATAACCGGAGAAAAAG 274
| ||| |.||| ||..|.|||||.|||.|..
BL02964___ybc 246 GCTGAGCCGCATGATGAAG------------AAGCTGACCGGTGAAGAGA 283
BSNT_00357___ 275 TGAAAAGTTTTCATACTGATTTAAGCTCCCGGACAGGTGAACGAGTGATG 324
.||..||.||||||||.|||.|.|||.|.||.|||||.|||||..|.|||
BL02964___ybc 284 CGATCAGCTTTCATACGGATATCAGCACGCGCACAGGCGAACGGATTATG 333
BSNT_00357___ 325 GTATTTAAATTATGTAATGATCTAGAGAAAAATTTGGAAAAGATCTTATA 374
||.||||||||....||.||.||..|.|||||.|||..|.||
BL02964___ybc 334 GTGTTTAAATTGGCAAACGACCTGCAAAAAAAATTGTCATAG-------- 375
BSNT_00357___ 375 A 375
BL02964___ybc 375 - 375
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