Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06076 and BL02958
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence dna-align/BSNT_06076___yxeA.1.5803.seq
# -bsequence dna-align/BL02958___yxeA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06076___yxeA-BL02958___yxeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06076___yxeA-BL02958___yxeA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06076___yxeA
# 2: BL02958___yxeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 240/369 (65.0%)
# Similarity: 240/369 (65.0%)
# Gaps: 45/369 (12.2%)
# Score: 697.0
#
#
#=======================================
BSNT_06076___ 1 ATGAAAAAAGCAATGGCAATCCTGGCCGNGGCT---GCTGCCGTAATATG 47
|||||||||.||||..|..||.|..|.| .||| |||| ||||
BL02958___yxe 1 ATGAAAAAAACAATTTCTCTCATTACAGCCGCTTTAGCTG------TATG 44
BSNT_06076___ 48 ---CGG-GC--TTCTCTTTTTTCATAACGATGTTACAGACAGATTTAATC 91
||| || ||||.||..|||||||.||.||.||||||||.||.||||
BL02958___yxe 45 TATCGGCGCATTTCTGTTGATTCATAATGAAGTGACAGACAGGTTCAATC 94
BSNT_06076___ 92 CGTTTATTCACCAGCAAGA---TGTCTATGTTCAGATTGATCGAGATGGC 138
|..||.| ..||.|||| .||.|||||.|||||..|...|||.||.
BL02958___yxe 95 CACTTGT---GAAGAAAGAAAGCGTATATGTCCAGATCAACAAAGACGGT 141
BSNT_06076___ 139 AGACATCTTAGTCCGGG-CGGTACTGAATATACATTAGACGGATATAATG 187
|..||.||.||.||||| ||.|| |||.||.||..|.||.||||||||||
BL02958___yxe 142 AAGCACCTGAGCCCGGGCCGCTA-TGAGTACACGCTGGAAGGATATAATG 190
BSNT_06076___ 188 -CATCCGGGAAAAAAGAAGAAGTGACCTTTTTCGCCGGCAAAGAGCTTCG 236
|| ||||.||..||.|||||.|.||.||.|.||||.||.|....||||
BL02958___yxe 191 ACA-CCGGTAAGGAAAAAGAAATTACATTCTCCGCCAGCGATTCCCTTC- 238
BSNT_06076___ 237 GAAG-AACGCGTATTTGAAGGTGAAGGCGAAAGGAAAGTATGTCGAGACT 285
|||| |||||.|||.|.|||||.||.|||||.|||||.|||||.|||||.
BL02958___yxe 239 GAAGAAACGCCTATCTAAAGGTAAACGCGAAGGGAAAATATGTTGAGACA 288
BSNT_06076___ 286 TGGGAAGAAGTCAAGTTTGAAGATATGCCGGACT-CCGTACAGTCAAAAT 334
|||||||||||..||...|..|..||||| ||.| ||||.|||..|||||
BL02958___yxe 289 TGGGAAGAAGTACAGCCCGGCGGCATGCC-GAGTGCCGTTCAGAAAAAAT 337
BSNT_06076___ 335 TAAAGTGA----------- 342
|||
BL02958___yxe 338 -----TGATCAAGCAATAA 351
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