Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02989 and BL02954
See
Amino acid alignment /
Visit
BSNT_02989 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02989___yneS.1.5803.seq
# -bsequence dna-align/BL02954___yneS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02989___yneS-BL02954___yneS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02989___yneS-BL02954___yneS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02989___yneS
# 2: BL02954___yneS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 622
# Identity: 415/622 (66.7%)
# Similarity: 415/622 (66.7%)
# Gaps: 68/622 (10.9%)
# Score: 1355.5
#
#
#=======================================
BSNT_02989___ 1 ATGTTAATTGCTTTATTGATTATTTTGGCCTACTTGATAGGCAGCATTCC 50
||||||||.||||||||..|||||||.|||||..|..|.|||||||||||
BL02954___yne 1 ATGTTAATAGCTTTATTATTTATTTTAGCCTATCTACTCGGCAGCATTCC 50
BSNT_02989___ 51 GTCTGGCTTAATTGTGGGCAAGCTTGCCAAGGGAATTGATATTCGGGAGC 100
|||.|||||.|||||.||.|||...|||||.|||||.||.||..||||.|
BL02954___yne 51 GTCCGGCTTGATTGTCGGAAAGGCCGCCAAAGGAATCGACATCAGGGAAC 100
BSNT_02989___ 101 ACGGAAGCGGCAA-CTTAGGCGCTACCAATGCATTCCGTACATTGGGTGT 149
||||.|||||.|| ||| |||||.|||||.|||||.||.|||.|.||.||
BL02954___yne 101 ACGGCAGCGGGAATCTT-GGCGCCACCAACGCATTTCGGACACTCGGCGT 149
BSNT_02989___ 150 AAAAGCTGGTTCGGTCGTCATAGCCGGAGATATTTTGAAAGGGACACTGG 199
||||||.||.||..||||..|.||.|..||.||||||||||||||.||.|
BL02954___yne 150 AAAAGCCGGCTCTATCGTTGTGGCTGCGGACATTTTGAAAGGGACGCTCG 199
BSNT_02989___ 200 CAACTGCATTGCCTTTTC---------TCATGCATGTTGATATTCACCCG 240
| .||| |||| ||.||||..|.|...|.|||||.
BL02954___yne 200 C--------CGCC-TTTCTGCCCGCCATCCTGCACATCGGCGTACACCCT 240
BSNT_02989___ 241 CTTCTTGCAGGAGTCTTTGCGGTTTTAGGCCACGTGTTTCCCATCTTCGC 290
.|.||.||.||.||....||.||..|.||.||..||||.||..|.|||||
BL02954___yne 241 TTGCTGGCCGGCGTAGCCGCAGTCATCGGGCATATGTTCCCTGTGTTCGC 290
BSNT_02989___ 291 CAAATTTAAAGGCGGTAAAGCCGTGGCGACATCAGGAGGCGT-----TTT 335
.||||||||||||||.|||||.||.||.||.||.|||||||| |||
BL02954___yne 291 AAAATTTAAAGGCGGAAAAGCTGTCGCTACTTCCGGAGGCGTATTGCTTT 340
BSNT_02989___ 336 GCTATTTTACGCA-CCCCTGTTATTTATCACGATGGTTGCGGTATTCTTC 384
||||| || ||.||..|.|||.||||.|||||||||||.|||||.
BL02954___yne 341 GCTAT------CAGCCTCTTCTGTTTCTCACAATGGTTGCGGTGTTCTTT 384
BSNT_02989___ 385 ATCTTTTTATACTTGACTAAATTTGTTTCTCTCTCATCGATGTTAACAGG 434
.|.|||||.||..|.||.||||.|||.||.||.||.||.||.|||||.||
BL02954___yne 385 CTGTTTTTGTATATCACAAAATATGTATCGCTTTCTTCCATTTTAACCGG 434
BSNT_02989___ 435 GATCTAT---ACTGTTATATATAGTTTCTTTGTCCATGATACGTA----- 476
..|.||| ||.||| ||.|||.|.|| ||||.|
BL02954___yne 435 CTTGTATACAACGGTT---TACAGTCTGTT---------TACGAAAGACC 472
BSNT_02989___ 477 -TTTATTGAT---TGTCGTTACCCTGCTCACTATTTTTGTGATATACAGA 522
|||||||.| .|||||..||.|.||.||....|||||..||||||||
BL02954___yne 473 TTTTATTGGTGGCAGTCGTCGCCTTTCTTACGGCGTTTGTCGTATACAGA 522
BSNT_02989___ 523 CACCGAGCGAACATTAAACGAATTATCAATAAAACAGAACCTAAAGTAAA 572
|||.|..|||||||||||||.||.|||.|||||||.||.||.|||.|.||
BL02954___yne 523 CACAGGACGAACATTAAACGCATCATCGATAAAACCGAGCCCAAAATCAA 572
BSNT_02989___ 573 ATGGTTAT-----AA------- 582
.|||.|.| ||
BL02954___yne 573 GTGGATGTCCGGCAAAAGATGA 594
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.