Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02970 and BL02949
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02970___yneK.1.5803.seq
# -bsequence dna-align/BL02949___yneK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02970___yneK-BL02949___yneK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02970___yneK-BL02949___yneK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02970___yneK
# 2: BL02949___yneK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 319/451 (70.7%)
# Similarity: 319/451 (70.7%)
# Gaps: 44/451 ( 9.8%)
# Score: 1135.5
#
#
#=======================================
BSNT_02970___ 1 ATGCTGGAAGGATGGTTTTTATGGTTTATTCTGTTTTGGGTGATCATGAT 50
||||||||||||||||||||||||.|.||.||...||||.|..||||.||
BL02949___yne 1 ATGCTGGAAGGATGGTTTTTATGGCTGATGCTCGCTTGGATCGTCATCAT 50
BSNT_02970___ 51 GGTAGTCTTATTATCAATCGGCGGTTTTTTCATGTTTCGAAAGTTTTTAA 100
|.|.|||.|.||.||||||||||||||||||||||||||.||.|||||||
BL02949___yne 51 GATCGTCCTCTTGTCAATCGGCGGTTTTTTCATGTTTCGCAAATTTTTAA 100
BSNT_02970___ 101 AGCGTTTACCAAAAGAGGACGGCAGATCAGAGCTTGATTGGCAGGATTAC 150
|..|..|.||.|||||.||.||.|.|||.|||||.||.|||||||||||.
BL02949___yne 101 AAAGGCTGCCTAAAGAAGATGGGAAATCTGAGCTGGACTGGCAGGATTAT 150
BSNT_02970___ 151 TATATTGAAAACAGCAGACATTTATGGAACGATGAAAACAAACAGTTTCT 200
|||||||||.|.|..||.|||||.|||||.||.|||.|.|||.|..|.||
BL02949___yne 151 TATATTGAACAGACAAGGCATTTGTGGAATGACGAAGAAAAAGAACTGCT 200
BSNT_02970___ 201 AGATGAATTGACTGCGCCCGTGCCAGAGCTGTTCAGAGATGCAGCAAAAG 250
.||.||||||..|.|.|||||.||.||||||||..|.||||.||||||||
BL02949___yne 201 TGAGGAATTGGTTTCACCCGTACCCGAGCTGTTTCGCGATGTAGCAAAAG 250
BSNT_02970___ 251 CTAAAATCGCAGGCAAAATCGGTGAGCTTGCATTAAAAGAAAAGGTAGCA 300
|.||||||||.||.||.|||||.|||||||||||.|||||||| |||
BL02949___yne 251 CAAAAATCGCCGGTAAGATCGGGGAGCTTGCATTGAAAGAAAA---AGC- 296
BSNT_02970___ 301 AAG-----ATTGATCAGCAACTTATGATCAAAGGCTATATTCTCGCAACT 345
|| ||.||.|.|.|..|.||.||||.||||||||||.|.||.||.
BL02949___yne 297 -AGGCGCCATCGACCGGGATTTAATCATCAGAGGCTATATTATGGCCACA 345
BSNT_02970___ 346 CCTAAAAGAGACCATACCTTC------------TTAAAAAGGCATCTGCG 383
||.|||||||||||||..||| ||||||
BL02949___yne 346 CCGAAAAGAGACCATAAGTTCCTCGTGAAACGTTTAAAA----------- 384
BSNT_02970___ 384 GGACAAAAAAATCGATTTGGAAC----CTTATC-AGACCCTTCTCAAATA 428
||.||.||.||.||| .|| |.|||| ||| .|||.|.|||||
BL02949___yne 385 -GAAAAGAACATTGAT----CACTCTACATATCAAGA-GCTTTTTAAATA 428
BSNT_02970___ 429 A 429
|
BL02949___yne 429 A 429
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