Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02991 and BL02947
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02991___yneT.1.5803.seq
# -bsequence dna-align/BL02947___yneT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02991___yneT-BL02947___yneT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02991___yneT-BL02947___yneT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02991___yneT
# 2: BL02947___yneT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 311/416 (74.8%)
# Similarity: 311/416 (74.8%)
# Gaps: 10/416 ( 2.4%)
# Score: 1135.0
#
#
#=======================================
BSNT_02991___ 1 ATGCAAAATCCTTCTAAAGCGGAAATTAAAGAGATTCTTCAAAGAAGCAA 50
.||.||||||||||||||..||||||.|||...||||||.|||..||||.
BL02947___yne 1 GTGGAAAATCCTTCTAAACAGGAAATCAAAACCATTCTTGAAAACAGCAG 50
BSNT_02991___ 51 ACGTATAGCGGTAGTAGGGCTT-TCAGACCGTCCGGATAGAACGTCACAT 99
|||.||.|||||||| .||||| ||.|||...||.||.|||||.||..|.
BL02947___yne 51 ACGAATTGCGGTAGT-CGGCTTGTCCGACAACCCTGAAAGAACATCGTAC 99
BSNT_02991___ 100 ATGGTTTCAAAAGCAATGCAGGACGCGGGTTATGAAATTATCCCTGTGAA 149
|||||.||||||||.||||||||||||||.|||||.||.||||||||.||
BL02947___yne 100 ATGGTATCAAAAGCGATGCAGGACGCGGGATATGACATCATCCCTGTCAA 149
BSNT_02991___ 150 CCCTACAATTGATGAGGCGCTAGGTATCAAAGCCGTTTCATCTTTAAAAG 199
.||.||.||||||||||||||.||..||||.||.||..||||.|||||||
BL02947___yne 150 TCCGACCATTGATGAGGCGCTGGGCGTCAAGGCTGTGGCATCCTTAAAAG 199
BSNT_02991___ 200 AGATAGACGGTC-CGATTGACATCGTAAATGTATTCCGGCGATCAGAACA 248
|.||.||.||.| || ||||.|||||.|||||.|||.|..||||.||.||
BL02947___yne 200 ACATTGAAGGACACG-TTGATATCGTCAATGTGTTCAGAAGATCCGAGCA 248
BSNT_02991___ 249 GCTTCCTGGAGTGGCGGAAGAGTTTTTAGAGACAGATGCGCCAGTATTTT 298
.||.||||..||.||..|.||.||..|.||||.|||.||....||.||||
BL02947___yne 249 TCTGCCTGATGTCGCAAAGGAATTCCTGGAGATAGACGCAGATGTGTTTT 298
BSNT_02991___ 299 GGGCACAGCAAGGGCTAGTTAATGAGGAAGCATACCAGATGCTAAAAGAA 348
||||.|||||.|||||.||.|||||.|||||.||.|||.|.||.|..|||
BL02947___yne 299 GGGCGCAGCAGGGGCTTGTCAATGAAGAAGCTTATCAGCTTCTGAGCGAA 348
BSNT_02991___ 349 AAAGGCAGAACGGTTATCATGGATCTGTGCATAAAAGTGGCACACGCTGT 398
||||||...|||||.||.||||||.||||||||||||||||||||.|..|
BL02947___yne 349 AAAGGCTATACGGTGATTATGGATTTGTGCATAAAAGTGGCACACTCGTT 398
BSNT_02991___ 399 AACAAAATAG------ 408
||||||||.|
BL02947___yne 399 AACAAAATCGGCATAA 414
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