Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02986 and BL02946

See Amino acid alignment / Visit BSNT_02986 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_02986___yneQ.1.5803.seq
#    -bsequence dna-align/BL02946___yneQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02986___yneQ-BL02946___yneQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02986___yneQ-BL02946___yneQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02986___yneQ
# 2: BL02946___yneQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     218/312 (69.9%)
# Similarity:   218/312 (69.9%)
# Gaps:          21/312 ( 6.7%)
# Score: 673.5
# 
#
#=======================================

BSNT_02986___      1 ATGGCGTTTGGTGTGAAACGGGAGGAACTTAACCGGTGGAAACAAGCAGT     50
                     ||||||||.|||.|.|||.|..|.||.||.|||...|||||.|..||.||
BL02946___yne      1 ATGGCGTTCGGTATTAAAAGAAACGAGCTGAACGAATGGAAGCGCGCCGT     50

BSNT_02986___     51 GAAAAGAGGAGAAATCGCATTTTTAACACATTACTGGCTGGATGACCGAT    100
                     ...||..||.|||.|.||.|||.|.||.|||||||||||.||||||.|.|
BL02946___yne     51 TTTAAACGGCGAAGTTGCGTTTCTTACGCATTACTGGCTCGATGACAGGT    100

BSNT_02986___    101 TTCCAGAAG-CAAAGACTGTGACAAAAGCCGGATGTGCAGACATTGATAA    149
                     .|||.||.| |||| ||.|||||||||||.|||||.||..|||||||.||
BL02946___yne    101 ATCCGGATGTCAAA-ACGGTGACAAAAGCAGGATGCGCGAACATTGAGAA    149

BSNT_02986___    150 GCTGGTTCAGTGGGG--AGCGGCGTACGGGTTAAAAAAAGAATGGATCCA    197
                     |||.|...|||||||  |.|  .||||||..|.||||||||.|||||..|
BL02946___yne    150 GCTTGCAGAGTGGGGCAAAC--AGTACGGACTGAAAAAAGAGTGGATTGA    197

BSNT_02986___    198 TAAGAAAAGTGAATTTCCTCACTTTGATCTGCTGGGTGAAACACAAAAAT    247
                     |||.|.|||.||||||||.|||||||||.|..||||.||.|..|  |.||
BL02946___yne    198 TAAAAGAAGCGAATTTCCCCACTTTGATTTATTGGGAGAGAAGC--AGAT    245

BSNT_02986___    248 -ATG-TTTTGGAACAAGAAAACCT---AACCGATCATCTTATACGATTTC    292
                      ||| ||||..||||||||||.||   ||.|   |||.|.|..|| ||||
BL02946___yne    246 CATGATTTTAAAACAAGAAAAGCTCTCAAGC---CATATCAAGCG-TTTC    291

BSNT_02986___    293 A--TTTG--TAA    300
                     |  .|||  |||
BL02946___yne    292 AGGCTTGAATAA    303


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