Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02982 and BL02944

See Amino acid alignment / Visit BSNT_02982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_02982___tlp.1.5803.seq
#    -bsequence dna-align/BL02944___tlp.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02982___tlp-BL02944___tlp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02982___tlp-BL02944___tlp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02982___tlp
# 2: BL02944___tlp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     170/261 (65.1%)
# Similarity:   170/261 (65.1%)
# Gaps:          33/261 (12.6%)
# Score: 497.0
# 
#
#=======================================

BSNT_02982___      1 ATGACAAAGAACCAAAATCAATATCAGCAGCCTAATCCTGATGATCGTTC     50
                     |||||         |.|||||.|.||      |.||||.|||||..|.||
BL02944___tlp      1 ATGAC---------ACATCAAAAACA------TCATCCGGATGACAGATC     35

BSNT_02982___     51 TGACAATGTGGAAAAATTGCAGGATATGGTTCAAAATACAATTGAAAATA    100
                     .|||||.||.|||||..|.||.||.|||||.||.||.|||||.|||||.|
BL02944___tlp     36 AGACAACGTAGAAAAGCTTCAAGACATGGTGCAGAACACAATCGAAAACA     85

BSNT_02982___    101 TAGAAGAAGCAGA--AGCATCAATGGAGTTTGCTTCAG-GA----GAAGA    143
                     |.||.||..|.||  ||||.|  ||...|||||  ||| ||    |||.|
BL02944___tlp     86 TTGAGGAGTCTGAAGAGCAGC--TGTCTTTTGC--CAGCGAGGCGGAACA    131

BSNT_02982___    144 TAAACAGCGTATCAAAGAAAAAAATGCAAGGCGCGAA--CAGAGCATTGA    191
                     ..|||||   |||...|||||||||| ||.|| ||||  .|.||||||||
BL02944___tlp    132 GGAACAG---ATCCGCGAAAAAAATG-AACGC-CGAAATGAAAGCATTGA    176

BSNT_02982___    192 AGCGTTTCGTAATGAAATACAGGACGAATCTGCAGCGAGACAAAACGGAT    241
                     .|||.|.||.||||||||.||.|||||..|.|.|||..|..|||||||||
BL02944___tlp    177 GGCGATGCGCAATGAAATCCATGACGAGGCGGAAGCCCGCAAAAACGGAT    226

BSNT_02982___    242 ACCGTTCTTAA    252
                     |.|.|...|||
BL02944___tlp    227 ATCATCAATAA    237


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