Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02978 and BL02940
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence dna-align/BSNT_02978___citB.1.5803.seq
# -bsequence dna-align/BL02940___citB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02978___citB-BL02940___citB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02978___citB-BL02940___citB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02978___citB
# 2: BL02940___citB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2744
# Identity: 2196/2744 (80.0%)
# Similarity: 2196/2744 (80.0%)
# Gaps: 31/2744 ( 1.1%)
# Score: 8697.5
#
#
#=======================================
BSNT_02978___ 1 ATGGCAAACGAGCAAAAAACTGCAGCAAAAGACGTTTTCCAAGCGAGAAA 50
|||||.||..|||||.|||..|||..||||||||.|||.|||.|.|||||
BL02940___cit 1 ATGGCGAATCAGCAACAAATCGCAAAAAAAGACGCTTTTCAATCAAGAAA 50
BSNT_02978___ 51 AACGTTTAC--TACAAATGGGAAAACATATCA-TTACTACTCTTTAAAAG 97
||||||||| ||||| ||.|||||.|| || .||.||.||||||||||
BL02940___cit 51 AACGTTTACAGTACAA--GGCAAAACGTA-CAGCTATTATTCTTTAAAAG 97
BSNT_02978___ 98 CGTTAGAAGATTCAGGTATAGGAAAGGTTTCGAAGCTTCCTTATTCCATC 147
|.|||||.|||..|||.||.|||||.||.||.||.||||||||||||||.
BL02940___cit 98 CATTAGAGGATCAAGGAATCGGAAACGTATCAAAACTTCCTTATTCCATT 147
BSNT_02978___ 148 AAAGTTCTTTTAGAATCAGTATTGCGTCAAGTTGACGGCTTCGTTATCAA 197
||||||.|..|.|||||.||..|.||||||||.|||||....||.||.|.
BL02940___cit 148 AAAGTTTTGCTCGAATCCGTTCTTCGTCAAGTAGACGGGAGAGTCATTAC 197
BSNT_02978___ 198 AAAAGAACACGTGGAAAATTTGGCAAAATGGGGAACTGCCGAATTAAAGG 247
..|.||||||||.|||||.||||||||||||||.||||||||||||||.|
BL02940___cit 198 TGAGGAACACGTTGAAAACTTGGCAAAATGGGGCACTGCCGAATTAAAAG 247
BSNT_02978___ 248 ATATCGACGTTCCGTTCAAACCGTCTCGAGTTATTTTACAAGACTTCACA 297
||||.||||||||.||||||||.||.||.||||||||.||.|||||.||.
BL02940___cit 248 ATATTGACGTTCCTTTCAAACCATCCCGCGTTATTTTGCAGGACTTTACC 297
BSNT_02978___ 298 GGGGTTCCGGCAGTAGTAGATCTGGCTTCACTGCGTAAAGCAATGGCAGC 347
||.|||||.||.||.|||||.||.||||||.|..|.|||||.|||||..|
BL02940___cit 298 GGCGTTCCAGCCGTTGTAGACCTTGCTTCATTAAGAAAAGCGATGGCTTC 347
BSNT_02978___ 348 TGTCGGCGGAGATCCTGATAAAATCAACCCTGAAATTCCTGTTGATCTCG 397
.||||||||||||||.|||||||||||.||||||||.||.||.||.||.|
BL02940___cit 348 AGTCGGCGGAGATCCGGATAAAATCAATCCTGAAATACCGGTAGACCTTG 397
BSNT_02978___ 398 TTATCGACCACTCTGTACAGGTAGATAAAGCGGGTACAGAAGATGCATTA 447
|.|||||||||||.|||||.||.||.|||||||||||.|||||||||||.
BL02940___cit 398 TCATCGACCACTCCGTACAAGTTGACAAAGCGGGTACGGAAGATGCATTG 447
BSNT_02978___ 448 GCAGTAAATATGGACTTGGAATTCGAAAGAAATGCAGAGCGCTACAAATT 497
.|.||.|||||||||.|.||||||.||.|||||||||||||.||||||||
BL02940___cit 448 ACCGTTAATATGGACCTTGAATTCCAACGAAATGCAGAGCGTTACAAATT 497
BSNT_02978___ 498 TTTAAGCTGGGCAAAGAAAGCGTTTAATAATTATCAGGCAGTGCCGCCTG 547
||||||||||||.|||||||||||||||||.|||||.||.||.||.||||
BL02940___cit 498 TTTAAGCTGGGCTAAGAAAGCGTTTAATAACTATCAAGCTGTTCCCCCTG 547
BSNT_02978___ 548 CAACAGGTATTGTGCACCAGGTCAACCTTGAGTTCTTGGCAAGTGTTGTC 597
|.|||||||||||.||||||||.||||||||||..|||||||..||||||
BL02940___cit 548 CTACAGGTATTGTTCACCAGGTGAACCTTGAGTATTTGGCAAACGTTGTC 597
BSNT_02978___ 598 CATGCCATTGAAGAAGACGGCGAGCTTGTAACGTATCCTGATACGCTTGT 647
|||||..|.|||||||||||||||.||||.||.||||||||.||||||||
BL02940___cit 598 CATGCAGTGGAAGAAGACGGCGAGATTGTCACTTATCCTGACACGCTTGT 647
BSNT_02978___ 648 CGGAACAGACTCACACACAACAATGATTAACGGTATCGGTGTTCTCGGCT 697
|||.||.|||||.||.|||||.|||||.|||||.|||||.||||||||||
BL02940___cit 648 CGGTACTGACTCCCATACAACGATGATCAACGGAATCGGCGTTCTCGGCT 697
BSNT_02978___ 698 GGGGTGTCGGTGGAATTGAAGCTGAAGCGGGAATGCTTGGACAGCCTTCT 747
||||.|||||.|||||||||||||||||.||.|||||.||.||||||||.
BL02940___cit 698 GGGGCGTCGGCGGAATTGAAGCTGAAGCAGGCATGCTCGGCCAGCCTTCA 747
BSNT_02978___ 748 TACTTCCCAGTTCCAGAGGTAATCGGCGCGAAACTTGTCGGCAAGCTTCC 797
||.|||||.||.||.||.||||||||.|||||.||||||||.|||||.||
BL02940___cit 748 TATTTCCCTGTACCTGAAGTAATCGGTGCGAAGCTTGTCGGAAAGCTGCC 797
BSNT_02978___ 798 AAACGGAACAACAGCTACTGACTTGGCGTTAAAAGTAACACAAGTGCTGC 847
.|||||.||.|||||.||.|||.|.|||.|.|||||.|||||.|||||||
BL02940___cit 798 GAACGGTACGACAGCGACGGACCTTGCGCTTAAAGTGACACAGGTGCTGC 847
BSNT_02978___ 848 GTGAAAAAGGCGTTGTCGGTAAATTTGTTGAATTCTTCGGACCGGGAATT 897
|||||||||||||.|||||.||.||.||.|||||||||||.|||||..||
BL02940___cit 848 GTGAAAAAGGCGTAGTCGGAAAGTTCGTCGAATTCTTCGGTCCGGGTGTT 897
BSNT_02978___ 898 GCTGAACTGCCGCTTGCAGATCGCGCAACAATTGCGAATATGGCTCCGGA 947
||.|||||.|||||||||||.||.||.|||||.||.|||||||||||.||
BL02940___cit 898 GCGGAACTACCGCTTGCAGACCGTGCGACAATCGCAAATATGGCTCCTGA 947
BSNT_02978___ 948 ATACGGTGCTACATGCGGATTCTTCCCAGTAGATGAAGAAGCGCTTAACT 997
||||||.||.||.|||||.||||||||.||.|||||.|||||..|..|.|
BL02940___cit 948 ATACGGCGCGACTTGCGGTTTCTTCCCTGTTGATGAGGAAGCATTGGAAT 997
BSNT_02978___ 998 ACCTGCGCCTGACTGGCCGTGATCCTGAACATATTGATGTTGTTGAAGCA 1047
||.||||..|.||.|||||||||...||||||||..||||.||..|||.|
BL02940___cit 998 ACATGCGTTTAACAGGCCGTGATGAAGAACATATCAATGTGGTGAAAGAA 1047
BSNT_02978___ 1048 TACTGCAG--AAGCAATGGCTTGTTCTACACTCCAGATGCGGAAGACCCT 1095
||.|||.| || ||.||..||||||||||.||.|||..||||||.|||
BL02940___cit 1048 TATTGCCGTCAA--AACGGACTGTTCTACACGCCTGATCAGGAAGATCCT 1095
BSNT_02978___ 1096 CAATTTACTGATGTGGTTGAAATTGACCTGTCTCAAATTGAAGCAAACTT 1145
..||||||.|||.|.||||||||.|||.||||..||.|||||||.|||.|
BL02940___cit 1096 GTATTTACCGATATCGTTGAAATCGACTTGTCAAAAGTTGAAGCGAACCT 1145
BSNT_02978___ 1146 ATCGGGTCCAAAGCGTCCTCAGGATTTGATCCCGCTATCTGCTATGCAGG 1195
.||.|||||.|||||||||||||||.|.||.|||||..|||..|||.|.|
BL02940___cit 1146 TTCAGGTCCGAAGCGTCCTCAGGATCTCATTCCGCTGACTGACATGAAAG 1195
BSNT_02978___ 1196 AAACGTTTAAAAAGCAATTAGTCAGCCCTGCAGGTAACCAAGGATTCGGT 1245
|||||||..|.|||||.||.|..||||||||.||.|||||.|||||||||
BL02940___cit 1196 AAACGTTCCACAAGCATTTGGCAAGCCCTGCGGGCAACCAGGGATTCGGT 1245
BSNT_02978___ 1246 TTAAATGCTGAG-GAAGAAAATAAAGAAATTAAGTTTAAACTCCTTAACG 1294
|||||.|| ||| ||.|...|.||||||||.||.|||||.||....||||
BL02940___cit 1246 TTAAACGC-GAGCGAGGCTGACAAAGAAATCAAATTTAAGCTTGAAAACG 1294
BSNT_02978___ 1295 GCGAAGAAACAGTTATGAAAACGGGTGCGATCGCCATTGCTGCGATTACA 1344
||||||||.|.||.||||||||||||||||||||.|||||.||||||||.
BL02940___cit 1295 GCGAAGAAGCCGTCATGAAAACGGGTGCGATCGCAATTGCGGCGATTACC 1344
BSNT_02978___ 1345 AGCTGTACAAATACATCAAACCCATACGTTCTGATCGGCGCCGGACTGGT 1394
|||||||||||||||||||||||.||.||..|.|||||.||.||.||.||
BL02940___cit 1345 AGCTGTACAAATACATCAAACCCTTATGTCTTAATCGGTGCGGGCCTCGT 1394
BSNT_02978___ 1395 AGCGAAAAAAGCGGTTGAGTTAGGGCTT-AAGGTGCCTAATTACGTGAAA 1443
.||.||||||||||||||..| |||.|| ||.||.||.||.||.||||||
BL02940___cit 1395 CGCCAAAAAAGCGGTTGAACT-GGGATTGAAAGTACCGAACTATGTGAAA 1443
BSNT_02978___ 1444 ACGTCACTTGCACCGGGTTCTAAAGTTGTTACAGGATATCTT-GTGAATT 1492
||.||.||.||.||||||||.|||||.||.|||||.|| ||| ||.||||
BL02940___cit 1444 ACATCTCTCGCTCCGGGTTCAAAAGTCGTAACAGGCTA-CTTGGTTAATT 1492
BSNT_02978___ 1493 CAGGCCTTCTTCCATACATGAAAGAGCTTGGCTTTAACCTCGTTGGCTAC 1542
|||||||.||.||.||.|||...||||||||.||||||.||||.||||||
BL02940___cit 1493 CAGGCCTGCTGCCGTATATGCGCGAGCTTGGATTTAACATCGTCGGCTAC 1542
BSNT_02978___ 1543 GGTTGTACAACATGTATCGGGAACTCAGGTCCGCTTTCACCGGAAATCGA 1592
||.|||||.|||||||||||||||||.||.||||||.|.||.||||||||
BL02940___cit 1543 GGCTGTACGACATGTATCGGGAACTCCGGACCGCTTGCGCCTGAAATCGA 1592
BSNT_02978___ 1593 AGAAGCGGTTGCGAAAAATGATCTTCTGATTACGTCTGTCCTTTCCGGAA 1642
|.||||||||||..||||.||.||.|||||||||||||||||||||||.|
BL02940___cit 1593 AAAAGCGGTTGCCGAAAACGACCTGCTGATTACGTCTGTCCTTTCCGGTA 1642
BSNT_02978___ 1643 ACCGTAACTTTGAAGGACGTATTCACCCGCTTGTTAAAGGCAACTATCTT 1692
||||||||||||||||.||.|||||.||||||||.|||||.||||| |||
BL02940___cit 1643 ACCGTAACTTTGAAGGCCGGATTCATCCGCTTGTCAAAGGAAACTA-CTT 1691
BSNT_02978___ 1693 -GCTTCACCGCCGCTTGTTGTGGCATATGCGCTGGCTGGAACGGTAAACA 1741
||.||.|||||.||.||.|||||.|||||..||||.||.||||||.|.|
BL02940___cit 1692 GGCGTCTCCGCCTCTAGTCGTGGCCTATGCATTGGCAGGTACGGTAGATA 1741
BSNT_02978___ 1742 TTAACTTGAAAACCGATCCAATCGGTGTGGGCAAGGATGGTCAAAACGTA 1791
|..||.||||||.|||.||.|||||.||.|||||.||.||||||||.||.
BL02940___cit 1742 TCGACCTGAAAAACGAACCGATCGGCGTCGGCAAAGACGGTCAAAATGTG 1791
BSNT_02978___ 1792 TACTTTAATGATATTTGGCCGTCAATGGACGAAATCAATGCACTTGTTAA 1841
|||||.||.||||||||||||.|.|||||||||||||||.|..|.||.||
BL02940___cit 1792 TACTTCAACGATATTTGGCCGACGATGGACGAAATCAATTCCGTCGTGAA 1841
BSNT_02978___ 1842 GCAAACTGTTACGCCAGAGCTATTCCGCAAAGAGTATGAAACAGTATTTG 1891
||||||.|||||.||.|||||.|||.|.|||||.||.||....||.||||
BL02940___cit 1842 GCAAACCGTTACTCCTGAGCTGTTCAGAAAAGAATACGAGCGCGTGTTTG 1891
BSNT_02978___ 1892 ATGACAACAAGCGCTGGAACGAAATTGAAACAACAGATGAAGCATTATAT 1941
|||||||..|.||||||||.|..|||||||||||.||||||||..|.|||
BL02940___cit 1892 ATGACAATGAACGCTGGAATGCGATTGAAACAACGGATGAAGCCCTGTAT 1941
BSNT_02978___ 1942 AAATGGGATAGCGAGTCAACTTACATTCAAAATCCGCCATTCTTCGAAGA 1991
|||||||||...|||||.|||||||||||.||.|||||||||||.|||.|
BL02940___cit 1942 AAATGGGATGAAGAGTCCACTTACATTCAGAACCCGCCATTCTTTGAAAA 1991
BSNT_02978___ 1992 AATGTCTGTTGAGCCAGGCAAGGTTGAACCATTAAAAGGTTTGCGTGTTG 2041
.|||||.|||||||||||.|..||||||||..|.|||||.|||||..|||
BL02940___cit 1992 CATGTCAGTTGAGCCAGGTACAGTTGAACCGCTTAAAGGCTTGCGCATTG 2041
BSNT_02978___ 2042 TCGGTAAATTCGGCGATTCAGTCACAACTGACCATATTTCTCCTGCGGGG 2091
||||.||||||||.||.||.|||||.||.||||||||.|||||||||||.
BL02940___cit 2042 TCGGCAAATTCGGAGACTCTGTCACGACAGACCATATCTCTCCTGCGGGA 2091
BSNT_02978___ 2092 GCAATCGGAAAAGATACGCCTGCCGGAAAGTATTTGCAAGAAAAAGGTGT 2141
||.|||||.|||||.|||||.||||||||.||||||||.||||||||.||
BL02940___cit 2092 GCGATCGGCAAAGACACGCCGGCCGGAAAATATTTGCAGGAAAAAGGCGT 2141
BSNT_02978___ 2142 TTCTCCTCGTGACTTTAACTCCTACGGTTCCCGCCGCGGAAACCATGAAG 2191
|||||||.|.|||||.|||||.||.|||||..|.||||||||||||||||
BL02940___cit 2142 TTCTCCTAGAGACTTCAACTCATATGGTTCAAGACGCGGAAACCATGAAG 2191
BSNT_02978___ 2192 TCATGATGAGAGGAACATTTGCAAACATTCGCATCAAAAACCAAATTGCA 2241
||||||||||.||||||||.||.|||||..|.|||||||||||.||.||.
BL02940___cit 2192 TCATGATGAGGGGAACATTCGCCAACATCAGAATCAAAAACCAGATCGCT 2241
BSNT_02978___ 2242 CCGGGTACAGAAGGCGGATTTACAACGTACTGGCCGACTGGTGAAGTAAC 2291
|||||.||.||||||||.|.|||||||||.||||||||.||.|||||.|.
BL02940___cit 2242 CCGGGCACTGAAGGCGGTTATACAACGTATTGGCCGACCGGAGAAGTGAT 2291
BSNT_02978___ 2292 ATCCATCTATGATGCGTGCATGAAATACAAAGAAGATAAAACTGGTCTTG 2341
.|||||.||||||||.||||||||.||.||||||||....||.|||||.|
BL02940___cit 2292 GTCCATTTATGATGCCTGCATGAAGTATAAAGAAGACGGCACAGGTCTGG 2341
BSNT_02978___ 2342 TCGT-ATTAGCAGGAAAAGACTATGGTATGGGATCTTCACGTGACTGGGC 2390
|||| ||| ||.|||||||||||.||.|||||.|||||.||.||||||||
BL02940___cit 2342 TCGTCATT-GCCGGAAAAGACTACGGAATGGGTTCTTCCCGCGACTGGGC 2390
BSNT_02978___ 2391 TGCAAAAGGAACAAACCTTCTCGGCATCAGAACGGTCATTGCAGAGAGCT 2440
.||||||||||||||.||.||||||||||.|||.|||||||||||.||||
BL02940___cit 2391 GGCAAAAGGAACAAATCTGCTCGGCATCAAAACCGTCATTGCAGAAAGCT 2440
BSNT_02978___ 2441 TCGAAAGAATTCACAGAAGCAATCTTGTATTCATGGGTGTGCTGCCGCTT 2490
|.||||||||||||||||||||.|||||..|.|||||.||.||.|||||.
BL02940___cit 2441 TTGAAAGAATTCACAGAAGCAACCTTGTGCTGATGGGCGTTCTTCCGCTG 2490
BSNT_02978___ 2491 CAGTTTAAACAAGGTGAAAATGCGGATACACTCGGCTTAACGGGTAAAGA 2540
||.||||||.|.||.|||||.||.||.||.|||||.||.||.||.|||||
BL02940___cit 2491 CAATTTAAAGAGGGAGAAAACGCTGAAACGCTCGGTTTGACCGGGAAAGA 2540
BSNT_02978___ 2541 AGTCATTGAGGTAGATGTTGA-TGAAACAGTTCGTCCTCGTGACCTTGTG 2589
|...|||||.|||||.| ||| |||..|.||.||.||.||.||.||.||.
BL02940___cit 2541 AACAATTGAAGTAGACG-TGAGTGAGTCGGTGCGCCCGCGCGATCTCGTC 2589
BSNT_02978___ 2590 ACTGTAAGAGCAATCAATGAAGACGGCAATGTAACAA--CTTTTGAAGCA 2637
...||.|.|||.||....||||||||||..|| ||| |.||||||||.
BL02940___cit 2590 CAAGTCAAAGCGATTGCCGAAGACGGCACGGT--CAAGTCGTTTGAAGCT 2637
BSNT_02978___ 2638 GTCGTCCGCTTTGATAGTGAAGTTGAAATTGATTACTACCGCCATGGCGG 2687
||.|||||||||||.||.|||||.|||||.|||||.|||||.||.|||||
BL02940___cit 2638 GTTGTCCGCTTTGACAGCGAAGTGGAAATCGATTATTACCGTCACGGCGG 2687
BSNT_02978___ 2688 CATCCTTCAAATGGTGCTTCGTGAAAAAATGAAGCAGTCCTGA- 2730
.|||||.|||||||||||.||..|.||||||||.|||| |
BL02940___cit 2688 AATCCTGCAAATGGTGCTCCGCAATAAAATGAAACAGT----AA 2727
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