Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02963 and BL02936
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02963___yneF.1.5803.seq
# -bsequence dna-align/BL02936___yneF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02963___yneF-BL02936___yneF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02963___yneF-BL02936___yneF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02963___yneF
# 2: BL02936___yneF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 195/219 (89.0%)
# Similarity: 195/219 (89.0%)
# Gaps: 0/219 ( 0.0%)
# Score: 879.0
#
#
#=======================================
BSNT_02963___ 1 ATGACTTTATGGGTTGGCATCCTAGTGGGCGTTGTTGCATTGCTCATAGG 50
|||..|||.|||||||.||||||||||||||||.|.|||||||||..|||
BL02936___yne 1 ATGGATTTGTGGGTTGTCATCCTAGTGGGCGTTTTAGCATTGCTCGCAGG 50
BSNT_02963___ 51 TGTTGCACTCGGGTTTTTTATTGCTCGTAAATATATGATGAGCTACCTGA 100
||||||||||||.||||||||||||||||||||||||||||.|||..|||
BL02936___yne 51 TGTTGCACTCGGATTTTTTATTGCTCGTAAATATATGATGAACTATTTGA 100
BSNT_02963___ 101 AAAAGAATCCGCCTATTAATGAACAAATGTTACGCATGATGATGATGCAA 150
||||.||||||||.|||||||||||||||.|.|||||||||||||||||.
BL02936___yne 101 AAAAAAATCCGCCAATTAATGAACAAATGCTGCGCATGATGATGATGCAG 150
BSNT_02963___ 151 ATGGGAATGAAACCTTCTCAAAAGAAAATCAATCAAATGATGAAAGCCAT 200
|||||.||||||||.||.||.||||||||.||||||||||||||||||||
BL02936___yne 151 ATGGGTATGAAACCATCCCAGAAGAAAATTAATCAAATGATGAAAGCCAT 200
BSNT_02963___ 201 GAATAATCAAACGAAATAA 219
|.|.|||||||||||||||
BL02936___yne 201 GGAAAATCAAACGAAATAA 219
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