Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02960 and BL02934

See Amino acid alignment / Visit BSNT_02960 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:39
# Commandline: needle
#    -asequence dna-align/BSNT_02960___tkt.1.5803.seq
#    -bsequence dna-align/BL02934___tkt.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02960___tkt-BL02934___tkt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02960___tkt-BL02934___tkt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02960___tkt
# 2: BL02934___tkt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2034
# Identity:    1535/2034 (75.5%)
# Similarity:  1535/2034 (75.5%)
# Gaps:          60/2034 ( 2.9%)
# Score: 5710.5
# 
#
#=======================================

BSNT_02960___      1 ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAAT     50
                     |||.|.||.||||||...|||||.||.||.||.||.||.|||||.||.||
BL02934___tkt      1 ATGAAAACGATTGAATTAAAATCTGTCGCAACAATACGAACACTCTCCAT     50

BSNT_02960___     51 AGACGCTATTGAAAAAGCAAATTCTGGTCACCCAGGGATGCCGATGGGAG    100
                     ||||||.|||||||||||.||.||.||||||||.||.|||||||||||..
BL02934___tkt     51 AGACGCGATTGAAAAAGCTAAATCCGGTCACCCCGGCATGCCGATGGGGA    100

BSNT_02960___    101 CCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCG    150
                     |.|||||.|||||.||..||||.|||||||||.|.|||||.||.||.||.
BL02934___tkt    101 CTGCTCCGATGGCTTATGCGCTTTGGACAAAAATGATGAATGTCAGCCCT    150

BSNT_02960___    151 GCAAACCCTGGCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACA    200
                     |.|||.||....|||||||||.|.|||||||||||..|.||.||.|||||
BL02934___tkt    151 GAAAATCCGAATTGGTTTAACAGGGACCGTTTTGTGCTTTCCGCCGGACA    200

BSNT_02960___    201 CGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGGTTTGATCTTA    250
                     |||.|||...||.||.||||||||||||||.||||||||.|.|||..||.
BL02934___tkt    201 CGGATCAATGCTTTTGTACAGCATGCTTCACTTAAGCGGATATGACGTTT    250

BSNT_02960___    251 GTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGA    300
                     ..||||||||.||.||....||||||||.|||||.||||||||.||.||.
BL02934___tkt    251 CAATTGAAGACCTCAAAAATTTCCGCCAATGGGGAAGCAAAACTCCTGGG    300

BSNT_02960___    301 CATCCGGAATTCGGACATACTGCCGGTGTTGATGCTACAACAGGTCCGCT    350
                     |||||||||||||||||||||.|.|||||.|||||.||.|||||||||||
BL02934___tkt    301 CATCCGGAATTCGGACATACTCCGGGTGTAGATGCGACTACAGGTCCGCT    350

BSNT_02960___    351 TGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT    400
                     ||||||||||||.|..|||||.|||||.|||||..||||||||||.||..
BL02934___tkt    351 TGGCCAAGGAATCGGAATGGCTGTCGGAATGGCGCTTGCTGAACGTCACC    400

BSNT_02960___    401 TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACA    450
                     |.||.|||||.||||||||.||....|.|..|||.||.||.|||||||||
BL02934___tkt    401 TTGCTGAAACTTACAACCGTGACGACTATCGCGTCGTTGACCATTATACA    450

BSNT_02960___    451 TACAGTATTTGCGGTGATGGTGATTTAATGGAAGGTATTTCTTCTGAAGC    500
                     |||||.|||||||||||.||.||.||.|||||.||.|||||.||.|||||
BL02934___tkt    451 TACAGCATTTGCGGTGACGGAGACTTGATGGAGGGAATTTCATCCGAAGC    500

BSNT_02960___    501 CGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACG    550
                     .|||||.||.||.||.|||.|..|.||.||||||||.|||||.||.||.|
BL02934___tkt    501 GGCTTCGCTTGCGGGACATTTGAACCTCGGCCGTCTCATCGTGCTTTATG    550

BSNT_02960___    551 ATTCTAATGACATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAA    600
                     ||||.||||||||.||.|||||.||.||.||..||||.||||||||||||
BL02934___tkt    551 ATTCAAATGACATTTCGCTTGACGGCGAACTAAACCGCTCATTCTCTGAA    600

BSNT_02960___    601 AACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTCTTTATGTTGA    650
                     ||.||.||.|||||.||||||||.||||||||||||||.|||||||||||
BL02934___tkt    601 AATGTAAAGCAGCGCTTTGAAGCGATGAATTGGGAAGTGCTTTATGTTGA    650

BSNT_02960___    651 GGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCC    700
                     .||.||.|||||.||||..|||.|.||.|||||.|||||.|||||....|
BL02934___tkt    651 AGACGGCAACAACATTGCCGAAATTACGGCGGCCATCGAGAAAGCGAAAC    700

BSNT_02960___    701 AAAATGAAAAGAAACCTACATTAATTGAAGTGAAAACGACAATCGGATTC    750
                     |||||||||||.|.||.||||||||||||||||||||.||.|||||.|||
BL02934___tkt    701 AAAATGAAAAGCAGCCGACATTAATTGAAGTGAAAACAACGATCGGTTTC    750

BSNT_02960___    751 GGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG    800
                     |||||.||.||||||||.||.||||||||.||.|||||.||.|||||.||
BL02934___tkt    751 GGTTCTCCAAACCGTGCGGGCACATCCGGCGTCCACGGCGCTCCGCTCGG    800

BSNT_02960___    801 TA----AAGAGGAAAGC-AAATTAACAAAAGAAGCTTACGCGTGGACATA    845
                      |    |||||    || ||||||||.||.|||||.||.|.|||||||||
BL02934___tkt    801 -ATCAGAAGAG----GCGAAATTAACGAAGGAAGCGTATGAGTGGACATA    845

BSNT_02960___    846 TGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATGAGCA-TTTCGCTGCA    894
                     .||||||||.||.||.|||||.||.|||||.||.||||| |||..| |.|
BL02934___tkt    846 CGAAGAAGATTTTTATGTTCCTTCCGAAGTGTACGAGCACTTTAAC-GAA    894

BSNT_02960___    895 GCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAA-----TGCT    939
                     .|.||.||.|||.|.||..||||||||||....||||||||     ||.|
BL02934___tkt    895 ACAGTGAAGGAAGCGGGCAAGAAAAAAGAGGCGGAATGGAACGAACTGTT    944

BSNT_02960___    940 CAATTCGCTAAATATAAAGAAGTTTATCCTGAACTTGCTGAACAGCTTGA    989
                     |  |.|||   |||.||..|||...|.||.||||||||.|||.|||||||
BL02934___tkt    945 C--TCCGC---ATACAAGAAAGCCCACCCGGAACTTGCCGAAGAGCTTGA    989

BSNT_02960___    990 ACTGGCAATCAAAGGAGAGCTTCC-GAAGGACTGGGATCAAGAGGTTCCT   1038
                     ||||||.||||||||.|||||||| |||||| ||||||||..|.||.|||
BL02934___tkt    990 ACTGGCGATCAAAGGCGAGCTTCCTGAAGGA-TGGGATCAGAAAGTACCT   1038

BSNT_02960___   1039 GTGTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGT   1088
                     ||.||||||||||||||||||||.||.||.||||||||.||.||||||||
BL02934___tkt   1039 GTATATGAAAAAGGAAGCAGCCTTGCTTCACGTGCATCCTCAGGTGAAGT   1088

BSNT_02960___   1089 TCTCAACGGACTTGCGAAAAAAATTCC---TTTCTTTGTCGGAGGTTCTG   1135
                     ..|.||||||.|.||..||.||.|.||   ||||||||.||||   ||.|
BL02934___tkt   1089 GTTAAACGGAATCGCTCAACAAGTGCCGTTTTTCTTTGGCGGA---TCCG   1135

BSNT_02960___   1136 CTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTT   1185
                     |.|||.|.||.||.||.|||||||||||.||.|||||.|.|||.|||.||
BL02934___tkt   1136 CGGACTTGGCCGGTTCCAACAAAACGACAATCAAAAACGGCGGAGATGTT   1185

BSNT_02960___   1186 ACAGCGGTTGATTACTCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATT   1235
                     .|||||...||||||.|.||||.|||..|||||||.||||||.|.|||||
BL02934___tkt   1186 TCAGCGAAGGATTACGCCGGCAGAAATATCTGGTTCGGTGTAAGGGAATT   1235

BSNT_02960___   1236 TGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCTTCGTG   1285
                     |||||||||.|||||.||.|||||.|||||.|||||.||.||.||.||.|
BL02934___tkt   1236 TGCGATGGGAGCAGCTTTGAACGGAATGGCTCTTCACGGAGGCCTCCGCG   1285

BSNT_02960___   1286 TATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATT   1335
                     |||||||||||||.|||||.||.|||||.||||||.||.|.||.||||||
BL02934___tkt   1286 TATTCGGCGGAACGTTCTTCGTTTTCTCCGATTACTTGAGACCAGCGATT   1335

BSNT_02960___   1336 CGCCTTGCAGCGTTAATGGGCCTTCCTGTGACATATGTCTTCACACATGA   1385
                     ||.|||||.||.||.|||||.||||||||.||.|||||.||.||||||||
BL02934___tkt   1336 CGTCTTGCTGCATTGATGGGGCTTCCTGTCACCTATGTATTTACACATGA   1385

BSNT_02960___   1386 CAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGC   1435
                     |||.|||||.||.|||||||||||.|||||.||.|||||..|||||||||
BL02934___tkt   1386 CAGCATTGCCGTCGGTGAAGACGGACCGACTCATGAGCCGATTGAACAGC   1435

BSNT_02960___   1436 TTGCTTCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGAC   1485
                     |.||.|||||.||||||.||||.|||.|.||..|.|||.|.||.||.|||
BL02934___tkt   1436 TGGCATCACTTCGTGCGCTGCCGAACTTGTCCGTCATCAGACCTGCCGAC   1485

BSNT_02960___   1486 GGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGTGCAAAGCACTGACCA   1535
                     ||.|||||.||||||||.||.||||||||.||..|.|||...|..|||||
BL02934___tkt   1486 GGAAATGAAACAGCAGCTGCCTGGAAGCTCGCGCTTCAATCAAAAGACCA   1535

BSNT_02960___   1536 CCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAA   1585
                     .||.||.|||||.|||.|.|||||.||||||.|.||.||.||||||||..
BL02934___tkt   1536 GCCGACTGCGCTTGTGTTGACACGCCAAAACTTGCCGACAATCGATCAGT   1585

BSNT_02960___   1586 CAGCTGAAGAAGCATTGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCT   1635
                     |.||||||...||.|..|.|||.||..||||.|||||||||||||||||.
BL02934___tkt   1586 CTGCTGAAACGGCTTATGAAGGCGTTAAAAAGGGTGCATATGTCGTTTCA   1635

BSNT_02960___   1636 AAATCTAAAAACGAAACACCTGA--CGCTCTTCTCATCGCTT----CCGG   1679
                     |||....|||||||||.|||.||  ||.||||      ||||    .|||
BL02934___tkt   1636 AAAAGCCAAAACGAAAAACCGGAAGCGATCTT------GCTTGCGAGCGG   1679

BSNT_02960___   1680 ATCAGAGGTAGGTCTTGCAATTGAAGC-----GCAGGCTGAATTGGCAAA   1724
                     |||.||.||.||.|||||..||||.||     ||..||||.|     |||
BL02934___tkt   1680 ATCTGAAGTTGGCCTTGCGCTTGATGCACAAAGCGAGCTGCA-----AAA   1724

BSNT_02960___   1725 AGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTCAATGGACCGTTTTG   1774
                     ||||...||.||.||.||.|||||||||.|.||.|||..|||.||.||||
BL02934___tkt   1725 AGAAGGCATTGACGTATCCGTTGTCAGCGTTCCGTCATGGGATCGATTTG   1774

BSNT_02960___   1775 AGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAA   1824
                     |.||.||..|.|.||||||.|||||||..||.|||||..|.|||||||.|
BL02934___tkt   1775 ACAAGCAGCCGGCTGAATATAAAAACGCTGTTCTTCCAACTGATGTGACA   1824

BSNT_02960___   1825 AAACGTCTTGCAATTGAAATGGGCTCATCATTTGGATGGGGCAAATACAC   1874
                     ||.|||||.||||||||||||||.||..|..|.|||||||..|.|||.||
BL02934___tkt   1825 AAGCGTCTCGCAATTGAAATGGGATCGCCGCTCGGATGGGAGAGATATAC   1874

BSNT_02960___   1875 GGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCTGCTC   1924
                     .||...|||.||.|||.|||||||.||.||||..|||||||||||.||||
BL02934___tkt   1875 AGGCACTGACGGGGACATTCTCGGAATCGACCAGTTCGGTGCATCAGCTC   1924

BSNT_02960___   1925 CAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTG   1974
                     |.||.|||||.|||||.||.||||||||.||..|...|.||||.|||||.
BL02934___tkt   1925 CTGGCGAAACGATCATGAAAGAATACGGTTTTACGCCTGCGAATGTAGTT   1974

BSNT_02960___   1975 AATCGAGTTAAGGCA----TTAATCAATAAGTAA   2004
                     .|.||.||.||...|    |.||||..|||    
BL02934___tkt   1975 GACCGGGTGAAAAAACTGTTAAATCGCTAA----   2004


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