Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02959 and BL02933
See
Amino acid alignment /
Visit
BSNT_02959 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02959___ynzC.1.5803.seq
# -bsequence dna-align/BL02933___ynzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02959___ynzC-BL02933___ynzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02959___ynzC-BL02933___ynzC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02959___ynzC
# 2: BL02933___ynzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 179/238 (75.2%)
# Similarity: 179/238 (75.2%)
# Gaps: 8/238 ( 3.4%)
# Score: 630.0
#
#
#=======================================
BSNT_02959___ 1 ATGATTTCAAACGCGAAAATTGCCAGAATTAATGAACTTGCTGCCAAAGC 50
||||||||.||.|..|||||.|||||||||||.||.|||||....|||||
BL02933___ynz 1 ATGATTTCTAAAGAAAAAATAGCCAGAATTAACGAGCTTGCCAAAAAAGC 50
BSNT_02959___ 51 TAA-AGCTGG--CGTTATTACAGAAGAAGAAAAAGCCGAACAGCAAAAGC 97
.|| ||| || |.||| |||||.|||||||||||.||||||||.||||
BL02933___ynz 51 AAAGAGC-GGATCTTTA--ACAGACGAAGAAAAAGCAGAACAGCAGAAGC 97
BSNT_02959___ 98 TCCGTCAAGAGTACTTGAAAGGTTTTCGTTCTTCTATGAAGAACACGTTA 147
|.||.||.||.|||.|..||||..|.||..|.||||||||.||||||||.
BL02933___ynz 98 TTCGCCAGGAATACCTTCAAGGCGTCCGCGCGTCTATGAAAAACACGTTG 147
BSNT_02959___ 148 AAAAGTGTGAAAATCATTGACCCAGAAGGCAATGATGTTACACCAGAAAA 197
||||.|||||..||..|||||||.|||||.||||||||.||.||.|||||
BL02933___ynz 148 AAAACTGTGACGATTGTTGACCCTGAAGGTAATGATGTGACTCCTGAAAA 197
BSNT_02959___ 198 GCT-AAAAAGAGAACAAAGAAATAACAAACTTCACTAA 234
||| |||.|| |||.|||||||...|..|.|.||.|||
BL02933___ynz 198 GCTCAAACAG-GAAAAAAGAAACCGCCGATTGCATTAA 234
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.