Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01093 and BL02932
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence dna-align/BSNT_01093___pbuG.1.5803.seq
# -bsequence dna-align/BL02932___pbuG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01093___pbuG-BL02932___pbuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01093___pbuG-BL02932___pbuG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01093___pbuG
# 2: BL02932___pbuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1355
# Identity: 968/1355 (71.4%)
# Similarity: 968/1355 (71.4%)
# Gaps: 64/1355 ( 4.7%)
# Score: 3297.5
#
#
#=======================================
BSNT_01093___ 1 TTGAAAAAGTATTTTCAGTTTGATGAGCTGGGCACCAGCTATCGCAATGA 50
|||||....||.|||||||||||.||..|||||||.|..|||||.|..||
BL02932___pbu 1 TTGAAGCGTTACTTTCAGTTTGAAGAATTGGGCACAAATTATCGGAGAGA 50
BSNT_01093___ 51 AATCATTGGCGGATTAACGACTTTTTTATCTATGGCATATATATTGTTCG 100
|||.||.||||||.|.||.||.|||||.||.|||||||||||.|||.|||
BL02932___pbu 51 AATGATCGGCGGACTCACCACATTTTTGTCCATGGCATATATTTTGATCG 100
BSNT_01093___ 101 TCAATCCGATTACGCTTGCTTTGGACAGCGT-----GAAAGATTTTCCGG 145
||||.|||.||||.|||.||.|| |||| |||| ||||.||||
BL02932___pbu 101 TCAACCCGCTTACCCTTTCTCTG----GCGTCGGTGGAAA-ATTTCCCGG 145
BSNT_01093___ 146 AGGCACTGAGAATTGACCAGGGTGCGGTCTTTACGGCGACAGCGCTGGCG 195
|.|||.|||||||.||.||..|.||||||||||||||.||.|||.|
BL02932___pbu 146 ATGCATTGAGAATGGATCAAAGCGCGGTCTTTACGGCAACCGCGGT---- 191
BSNT_01093___ 196 TCTGCAGCA------GGCTGTATCTTAATGGGATTAATAGCGAGATATCC 239
||||||| ||.|||.|..|.|||||..|..|.||||..|||||
BL02932___pbu 192 --TGCAGCAGCCGTCGGTTGTTTTATCATGGGGCTGCTCGCGAAGTATCC 239
BSNT_01093___ 240 GATTGCCATCGCGCCGGGTATGGGGCTGAACGCGTTTTTTGCGTTTTCTG 289
|||.||..|.|||||.||.||||||||.|||||.||.|||||.||.||.|
BL02932___pbu 240 GATCGCTCTGGCGCCCGGAATGGGGCTTAACGCATTCTTTGCATTCTCAG 289
BSNT_01093___ 290 TTGTCCTTGGTATGGGTATTTCATGGCAGGCAGCTTTGTCTGGTGTTTTT 339
|..||||...||||...|||.|.||||||.|.|||.|.||.||.|||.|.
BL02932___pbu 290 TCATCCTGAATATGCAGATTCCTTGGCAGACGGCTCTTTCAGGCGTTATG 339
BSNT_01093___ 340 ATTTCAGGCCTTATTTTCGTTGCTCTTTCTTTAACAGGTTTTCGTGAAAA 389
.||||.||.||||||||..|.|.||||||..||.|.|||||..|.|||||
BL02932___pbu 340 GTTTCCGGACTTATTTTTATCGTTCTTTCGCTATCCGGTTTAAGGGAAAA 389
BSNT_01093___ 390 AATCATCAACGCCATTCCGCCTGAGCTGAAATTGGCAGTCGGTGCGGGGA 439
|||.|||||..|.|||||...||||||||||.||||.|||||||||||||
BL02932___pbu 390 AATTATCAATTCGATTCCTTATGAGCTGAAAATGGCTGTCGGTGCGGGGA 439
BSNT_01093___ 440 TCGGCCTGTTTATTACATTCGTTGGTTTGCAAGGCTCAGGAATCAT--TA 487
|.|||||||||||..|.|||||.||||||||.|||||...||||.| ||
BL02932___pbu 440 TTGGCCTGTTTATCGCTTTCGTCGGTTTGCAGGGCTCCAAAATCGTCGTA 489
BSNT_01093___ 488 CTGCAAATCCTTCTACGCTCGTCACGATCGGAAACATTCA--CAGCGGTC 535
.|.||.||...||||.|.||..||.|.||.||.||||| || ||||
BL02932___pbu 490 --TCCAACCCGGATACGATTGTGTCGTTTGGGAATATTCATTCA--GGTC 535
BSNT_01093___ 536 CTGTGCTGTTAACGATTTTCGGTGTGATTGTCACGGTTATTTTAATGGTG 585
|.||.||.||.||..|||||||..||||..||||.||.|||||||||||.
BL02932___pbu 536 CCGTTCTTTTGACTGTTTTCGGACTGATCATCACTGTCATTTTAATGGTA 585
BSNT_01093___ 586 CTTCGCGTGAACGCAGGCGTGTTTATCGGGATGCTGTTAACAGCGGTTGC 635
.|.|||||.||||..|||.|.||..|||||||||||.|.||.|||.|||.
BL02932___pbu 586 TTGCGCGTCAACGGCGGCATTTTCTTCGGGATGCTGATCACGGCGATTGT 635
BSNT_01093___ 636 CGGCATGATTTTCGGTTTGGTTCCGGTTCC-GACTCAAATTGTCGGCAGT 684
|||||||||||||||...|.||...||||| ||| .||||.||||
BL02932___pbu 636 CGGCATGATTTTCGGACAGATTGACGTTCCTGAC-AAAATCGTCG----- 679
BSNT_01093___ 685 GTGCCG-----AGCCTTGCGCCGACTTTCGGACAAGCGTGGATTCACCTC 729
|||||| ||.||||||||.||.||.||||||||.|..||.|||||.
BL02932___pbu 680 GTGCCGTTCCTAGTCTTGCGCCAACATTTGGACAAGCCTTTATCCACCTT 729
BSNT_01093___ 730 CCGGATATTTTCTCCGTACAAATGCTGATCGTTATTTTAACATTCTTGTT 779
|..|||||.||..|.||.||||||||..||||.||||||||.||.||.||
BL02932___pbu 730 CATGATATCTTTACGGTGCAAATGCTTGTCGTCATTTTAACGTTTTTATT 779
BSNT_01093___ 780 TGTCGGATTTTTTGATACAGCTGGTACACTTGTTGCTGTGGCAACACAAG 829
.||||..|||||||||||.||.|||||..|.||.|.|||.|||.||||||
BL02932___pbu 780 CGTCGACTTTTTTGATACGGCCGGTACTTTGGTGGGTGTTGCATCACAAG 829
BSNT_01093___ 830 CTGGTTTAATGAAGGAAAACAAATTGCCGCGTGCGGGCCGTGC---GCTT 876
|.|||||.||||||||.||||||.|||||||.|||||..|.|| ||||
BL02932___pbu 830 CCGGTTTGATGAAGGATAACAAACTGCCGCGCGCGGGAAGAGCTTTGCTT 879
BSNT_01093___ 877 TTAGCTGATTCATCTTCTATTGTGATCGGTGCCGTGCTTGGTACGTCTAC 926
||.|||||.||..|.|.||||..|||.||..|.||||||||.||.||
BL02932___pbu 880 ---GCCGATTCTTCCGCAACTGTGGCCGGAGCGATCCTTGGTACATCGAC 926
BSNT_01093___ 927 AACAACTTCTTACGTGGAATCAAGCTCAGGTGTCGCTGCGGGTGCCCGTT 976
|||.||..||||.||.||.||||||.|.||.||.||.||.||.||..|..
BL02932___pbu 927 AACGACCGCTTATGTTGAGTCAAGCGCCGGGGTAGCGGCCGGAGCGAGAA 976
BSNT_01093___ 977 CAGGATTTGCCGCAATTGTAACAGGGATTCTCTTTTTACTG--GCTACGT 1024
..||.|||||.||.||||||||.||..||.|.||.||.||| ||| ||
BL02932___pbu 977 GCGGTTTTGCGGCGATTGTAACCGGCGTTTTGTTCTTGCTGTCGCT--GT 1024
BSNT_01093___ 1025 TTTTCTCTCCGCTCCTA-TCAGTCGTT---ACGTCAAATGTAACAGCGCC 1070
|.|||| |||.|.|| |||| |||| ||.|||.|.||.||.|||||
BL02932___pbu 1025 TCTTCT---CGCCCGTACTCAG-CGTTATCACTTCACAAGTGACGGCGCC 1070
BSNT_01093___ 1071 GGCGCTTATTATTGTTG--GTGCATTGATGGTGGCGCCGCTTGGCAAAAT 1118
.||..|.||.||.||.| |||| |||||||||||...||...||||||
BL02932___pbu 1071 TGCTTTAATCATCGTCGGCGTGC--TGATGGTGGCGAATCTCAACAAAAT 1118
BSNT_01093___ 1119 CGCTTGGGATAAGTTCGAAGTGGCCGTTCCTGCTTTCCTTACCATGATCA 1168
||..|||...||.||.||..|.||.||.||.||.|||.|.||.||||||.
BL02932___pbu 1119 CGACTGGACCAAATTTGAGATTGCGGTGCCCGCATTCTTCACGATGATCG 1168
BSNT_01093___ 1169 TGATGCCGTTAACGTACAGCATAGCGACTGGTATTGCCATCGGATTTATT 1218
.|||||||.|.||.||.|||||.||.||.||.||.||.||||||||||||
BL02932___pbu 1169 CGATGCCGCTGACATATAGCATCGCCACCGGAATCGCGATCGGATTTATT 1218
BSNT_01093___ 1219 TTCTATCCGATTACAATGGTGTGCAAAGGAAAAGCAAAAGAGGTTCATCC 1268
|||||.|||||.||.|||.|.|..|||||.||||||||||||.|.|||||
BL02932___pbu 1219 TTCTACCCGATCACGATGATTTTTAAAGGCAAAGCAAAAGAGATCCATCC 1268
BSNT_01093___ 1269 AATCATGTACGGGCTGTTTCTCGTATTTATCCTGTACTTTATCTTCTTAA 1318
.||.||||||||.|||..|.||||||||||.||.||.||.||.|||||.|
BL02932___pbu 1269 GATTATGTACGGACTGGCTGTCGTATTTATTCTTTATTTCATTTTCTTGA 1318
BSNT_01093___ 1319 AATAA 1323
||||.
BL02932___pbu 1319 AATAG 1323
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