Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01089 and BL02927
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence dna-align/BSNT_01089.1.5803.seq
# -bsequence dna-align/BL02927___yebA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01089-BL02927___yebA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01089-BL02927___yebA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01089
# 2: BL02927___yebA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2482
# Identity: 1485/2482 (59.8%)
# Similarity: 1485/2482 (59.8%)
# Gaps: 527/2482 (21.2%)
# Score: 3992.5
#
#
#=======================================
BSNT_01089 1 ATG-CCGCACGATGATCACAAGGGAAGCCGTTTGAGCTTGCTGTTATTTT 49
.|| |||...|| ||..|||.|.|.||..|.||..||.|.||||
BL02927___yeb 1 TTGTCCGGGGGA-------AAAAGAAACAGGTTCGGTTTATTGCTTTTTT 43
BSNT_01089 50 ATTTTCTGGCTTTTTTATTGCTGTGGGAGTGGCTCAGGCCGCTTGACAG- 98
||.|.|||.|||||||..|||||||||||||||||.|.| |||..|||
BL02927___yeb 44 ATGTGCTGACTTTTTTGCTGCTGTGGGAGTGGCTCCGTC--CTTTGCAGT 91
BSNT_01089 99 -TTTTACTGAAACGAAACATACAGGCTTTTTTAGTGTCTTTATCGGT-TT 146
||||||.||.|||...||.||.|.||||||||.|.|.|||||||.| ||
BL02927___yeb 92 ATTTTACCGATACGGGGCACACCGTCTTTTTTATTTTATTTATCGCTCTT 141
BSNT_01089 147 G-ACGTTTCTGCTGACTTTTTTCAGGATGAGG-----TGGTTTGTCA--- 187
| | |||.||||.||.||||| |.||| ||||||.|||
BL02927___yeb 142 GTA--TTTTTGCTTACATTTTT-----TAAGGTCCCTTGGTTTATCAGAT 184
BSNT_01089 188 --CCGTT---CCTT---TTTGTGTCATATTTACATTGATCTCGATACACA 229
|||.| |||| ||.|| || |.|||.||.|| ||||
BL02927___yeb 185 TTCCGGTCAGCCTTGGCTTCGT-TC-TGTTTGCACTG---------CACA 223
BSNT_01089 230 TCCTGTTTTATCAAGGATC--TATATTCGACTTGAGCTGGGTCAGCTCT- 276
...|.|||||..||||||| |.|.|||..|||.| |||.| .||.||
BL02927___yeb 224 CGATTTTTTACGAAGGATCGGTGTTTTCACCTTCA--TGGAT-TGCCCTG 270
BSNT_01089 277 TTTTTGCAGGATGTCTATCTGAATATCACGCT-GATTCAATCT-GGGCA- 323
|||||.||||||.|..|.|..|||.||.| || .||| .||| .||||
BL02927___yeb 271 TTTTTCCAGGATTTAAAGCGAAATTTCTC-CTATATT--TTCTCCGGCAT 317
BSNT_01089 324 ATGGAATGACATGATTCCTTCATTTCGGACCCTGCTGTTTTTTGTGCTGC 373
.|||...||.|||...||.|..||||||||.|||||.||||..||.||.|
BL02927___yeb 318 GTGGCGGGATATGTCGCCGTTGTTTCGGACGCTGCTCTTTTACGTCCTTC 367
BSNT_01089 374 TGTGGCTGCTGGTCTATCTCCTGCATTATTGGGTGATTTACCAGAGAAGA 423
|.||||||||.||.||..|.|||||.||.||||||||.||.|||.|.|||
BL02927___yeb 368 TTTGGCTGCTCGTATACTTGCTGCACTACTGGGTGATCTATCAGCGCAGA 417
BSNT_01089 424 ATTTTGTTTTTCTTTTTGATGACAGTAGCGTATATTACGATTCTTGATAC 473
|||||.||.||.|||.|.|||||.||.|..|||.|..||.|..|.|||||
BL02927___yeb 418 ATTTTATTCTTTTTTATTATGACCGTTGTTTATGTCGCGGTGATCGATAC 467
BSNT_01089 474 CTTTACGCCATATGATGCCACTTTTGCCGTCATCCGTATCGTGCTGATCG 523
.||||||||.|.|||.||..|.|.|||..||.||.|.|||||||||||||
BL02927___yeb 468 ATTTACGCCGTTTGACGCGTCATATGCGATCGTCAGGATCGTGCTGATCG 517
BSNT_01089 524 GCTTCTTTATGCTGGGCCTTTTATACTTGGAACGCATTAAGCTGATGGAA 573
||||.||..|.||.|||||..|.||.||||||||.||.|.|
BL02927___yeb 518 GCTTTTTGCTTCTCGGCCTGCTGTATTTGGAACGGATCAGG--------- 558
BSNT_01089 574 AGAATCA----CACTGCCAAAAACATCTGTCCT-GAAAT---GGTTTCTT 615
|||||| |.|| |||| |||| ||||| |||| |.
BL02927___yeb 559 -GAATCAGAAGCGCT--CAAA--------TCCTCGAAATCGCGGTT--TG 595
BSNT_01089 616 CC------TTT------ATCTGTATTGGTTTTGGCTGCAACG-----GTA 648
|| ||| .||| ||||| .||.|||| || ||.
BL02927___yeb 596 CCAAATGGTTTGCACCGCTCT-TATTG---ATGACTGC--CGCCGCCGTG 639
BSNT_01089 649 T---TCGGACTCGC---CGCTCCAAAATCAGAGCCGGCCTGGCCTGATCC 692
| |||| ||| |.|.||||||.|.||.||.|.||||||||||||
BL02927___yeb 640 TGCATCGG---CGCGGTCTCGCCAAAAGCCGATCCCGTCTGGCCTGATCC 686
BSNT_01089 693 GGTGCCTTTTCTTAAAAAAATCA-----CT-CATCAAGACC-GCGTGTCT 735
||||||.||||| .|| || | |||| |||..|.|
BL02927___yeb 687 GGTGCCGTTTCT--------GCAGACGGCTGC-----GACCGGCGATTTT 723
BSNT_01089 736 G------CAGGGGAAAGCAAAATCGGATACGGGAATCATGATGAATCACT 779
| ||||...|||||||.||||.||.||.|...|||||||..||.|
BL02927___yeb 724 GCTTCCTCAGGCAGAAGCAAAGTCGGCTATGGAACGAATGATGAGGCATT 773
BSNT_01089 780 CGGCGGCCC--GTTCCAGCAGGATGCTACACCTGTTTTTACATGGCAGGG 827
.|||||.|| .|||.| |.||.|.||||...||.||||||||||||||
BL02927___yeb 774 GGGCGGTCCATTTTCAA--AAGACGATACATGGGTATTTACATGGCAGGG 821
BSNT_01089 828 AAAAGAGCGTACGTATTTCCGTGTGGAAACGAAGGACACG-TATACCGGA 876
|||.||.||.|..||||||.|.|||||||| ||..|..|| |||||.|||
BL02927___yeb 822 AAATGAACGAAGCTATTTCAGGGTGGAAAC-AAAAAGCCGCTATACAGGA 870
BSNT_01089 877 AAAGGCTGGATTGAA-ACAGACA---CAGGCATGTCGTATCAGCTTAGCA 922
||||||||||||||| || ||.| |||||...||...|||||||
BL02927___yeb 871 AAAGGCTGGATTGAAGAC-GAAAAATCAGGCGCATCCATTCAGCTT---- 915
BSNT_01089 923 ATGGAAAAGTTGA-AAATTTGTGGTTTGACCATAAGGT--TGCGACAGAG 969
|||.|| || ||| .|||.|| |||| || |.|||| ||.
BL02927___yeb 916 ---GAAGAG--GATAAA---CTGGATT-ACCA----GTGGTACGAC-GAA 951
BSNT_01089 970 AGCCGT----ACCG-TCCGTGTAAA-----AGTCGATA---AGCAC---T 1003
|| ||| |||| ..||.|.||| .||||||| |.|.| |
BL02927___yeb 952 AG-CGTGAAGACCGAAACGCGCAAAGCGATCGTCGATATCGATCCCGCTT 1000
BSNT_01089 1004 ACGGGTATAACCATCTGATGTATCCGATTGGTGCG---GAAACCATTCAG 1050
||.||||..|.|||.|..||||||||||.||..|| ||||.|| ||
BL02927___yeb 1001 ACCGGTACGATCATGTCCTGTATCCGATCGGGACGACCGAAATCA---AG 1047
BSNT_01089 1051 CCAAAGCAGGCTGTCT------CACTTGAAATGAACGGCAACACGGAGCA 1094
|..||..| |.||| |.||....||||||...||.||||||.|
BL02927___yeb 1048 CTCAATAA---TTTCTTTGTGCCGCTCCGCATGAACTTAAATACGGAGAA 1094
BSNT_01089 1095 AATTTCTCCGATCAGTGA-ACAAGC-CGGTGA-AATCAGAAATATGGGGA 1141
|||....|||..|.|..| |||.|| || || |.|||| |||.|||..|
BL02927___yeb 1095 AATAAAACCGGCCGGCAAGACAGGCGCG--GACATTCAG-AATCTGGAAA 1141
BSNT_01089 1142 ATTATACAGTAACGTACAATTCCCCGGTCTATAAGCTGGATGAACTGAGA 1191
..|||.|.||.||.||.||.||.||.||||.|.|..|.|||.|.|||||.
BL02927___yeb 1142 GCTATTCGGTCACCTATAAATCACCCGTCTTTGATGTCGATCAGCTGAGG 1191
BSNT_01089 1192 AAGGTAA-----AAGT--GAGAAAAAA-----CAG------TGAGGAGTA 1223
||.||.| .||| |||...||| ||| ||||.||
BL02927___yeb 1192 AAAGTCAGCTTGGAGTCGGAGGGGAAATGGGCCAGGAGCCATGAGAAG-- 1239
BSNT_01089 1224 CACATTCAGCGATCGCTACATGCAGCTTCCAGATTCACTGCCAGAGCGGG 1273
|||.||||||||||...|||.||.||.||.||.|
BL02927___yeb 1240 ----------------TACCTGCAGCTTCCCACTTCCCTTCCCGACCGCG 1273
BSNT_01089 1274 TGAGAACCCTTG-----CGATCAAACTGACTCAGGATCACGACAATATGT 1318
||| ||.|.||| ||||..||| || |.||..|.||.|||||.|
BL02927___yeb 1274 TGA-AAACATTGGCGCACGATTTAAC-GA---AAGACGAAGATAATATAT 1318
BSNT_01089 1319 TTGATAAGGTGAAAGCGGTTGAGGACTATTTAGGGTCAAATGCG--TTCA 1366
.|||.||.|.|||||||.|||||.|.|||.|.||.|| .|.|| ||..
BL02927___yeb 1319 ATGACAAAGCGAAAGCGATTGAGAAGTATCTCGGTTC--TTCCGAATTTT 1366
BSNT_01089 1367 CATATGAAACAGAAAACGTGACCATTCCTAA--GAATGATGAAGATTATG 1414
|.|||||.||.|||.|.||..|..||||||| || ||..|.|||||.|
BL02927___yeb 1367 CTTATGAGACGGAAGATGTCGCTGTTCCTAAAGGA--GACCAGGATTACG 1414
BSNT_01089 1415 TCGATCAATTTCTCTTTGAAACGAAAATGGGTTATTGTGATAACTTTTCT 1464
|||||||.|||.|.|||||.||||||||.||.||.||.||.||.|||||.
BL02927___yeb 1415 TCGATCAGTTTTTATTTGAGACGAAAATCGGCTACTGCGACAATTTTTCC 1464
BSNT_01089 1465 TCCGCCATGGTGGTGCTCTTGCGCTCGGCCGGCATTCCGGCCCGCTGGGT 1514
.|.||.|||.|.||.||..||||.||||||||.||.||||||||||||||
BL02927___yeb 1465 ACGGCTATGATCGTACTGCTGCGGTCGGCCGGAATACCGGCCCGCTGGGT 1514
BSNT_01089 1515 AAAGGGTTATACGTCCGGCGAATA--CAAAGAA-----GCA----GGAAA 1553
.||.||.||.||.|||||.||||| | |.||| ||| |||||
BL02927___yeb 1515 GAAAGGCTACACATCCGGTGAATATGC-AGGAACGACGGCAGACCGGAAA 1563
BSNT_01089 1554 CAAAAATGGCAGCATCTACGAAGTGACAAATAACAATGCCCATTCCTGGG 1603
| |||..||.|||||.||||||||.|||||||||||.|||||||
BL02927___yeb 1564 C-------GCACGATGTACGAGGTGACAAACAACAATGCCCACTCCTGGG 1606
BSNT_01089 1604 TAGAGGTGTATTTCCCGGAACAGGGCTGGGTTACATTTGAGCCGACTAAA 1653
|.||.||||||||....|.|||.|||||||||||.|||||.|||||.|||
BL02927___yeb 1607 TTGAAGTGTATTTTGAAGGACAAGGCTGGGTTACGTTTGAACCGACGAAA 1656
BSNT_01089 1654 GGGTTTACAAATCC---------GGCTGAATTTACTTCTTCTGACACAAA 1694
||.|||..|||||| .|.||||
BL02927___yeb 1657 GGCTTTTTAAATCCCGAGCAGCTCGTTGAA-------------------- 1686
BSNT_01089 1695 GGACTCCGGCAGCGATAAAAGCAGCTCGCCG--------------AAGAA 1730
||.|| |||||.| ||||..|||| ||.||
BL02927___yeb 1687 -GAGTC---CAGCGGT-----CAGCAAGCCGGCGCGGCTTCTGATAAAAA 1727
BSNT_01089 1731 AGCAAAAGA-GAAACAGAAAGAAGAGAAAAAACAG---CCGCA------A 1770
|| |||| ||.| |||||.|.||..||...||| ||||| |
BL02927___yeb 1728 AG---AAGATGATA-AGAAAAATGATGAAGGCCAGCGTCCGCAGGATGCA 1773
BSNT_01089 1771 AAAGAGGA--AAAACAAA----------------AGGAAAAGCGGGA-GC 1801
|||||..| |.|||||| |||.||||||.|| ||
BL02927___yeb 1774 AAAGAACAAGACAACAAAGAGAAGCCCGAATCCCAGGCAAAGCGTGATGC 1823
BSNT_01089 1802 CAGCTGTTTCTAAAAAGCCGTCCGCTTCGCATACTAATGCCGG-TGCGGG 1850
| ||||||| ||.|..||||||| .|||
BL02927___yeb 1824 C------------AAAGCCG----------ATTCCCATGCCGGAAGCG-- 1849
BSNT_01089 1851 CTTGTATGCAGCGCTTGCGGTTCTTGCAGTCCTCT------TGGTGGCAG 1894
.|| |||||| .|.||.|||| |||| ||.|
BL02927___yeb 1850 -ATG-ATGCAG--------------ACCGTACTCTTTTGACTGGT-GCGG 1882
BSNT_01089 1895 CTGTATTGCTGTATGTTTTCCGCT--CGTTATGGATTCCTGTTTT----- 1937
|.|||.| |.||.|||| ||| |||| ||.|....||.|||
BL02927___yeb 1883 CCGTACT-CGGTCTGTT----GCTGGCGTT-TGCAGCGGTGCTTTACTAT 1926
BSNT_01089 1938 -CACCGTGAG---GAAATTGAAGCGGCGCA--ACGATCAGCACGC----- 1976
|| || |||||.||.||.||.|| |..||||.||.||
BL02927___yeb 1927 ACA-----AGGGTGAAATGGATGCCGCACATCATCATCAACAGGCTGAAA 1971
BSNT_01089 1977 ------------------GTTT--TTTGAGGCATATGACGCGCTTCTGAA 2006
|||| |||.|.||.||.||||..||.||...
BL02927___yeb 1972 AAACGGCGTGATGAAGCGGTTTTCTTTAAAGCCTACGACGAACTGCTCCG 2021
BSNT_01089 2007 ACAACTGAAGAGAAAAGGGCTGCCGAAACGAGGCAGTG--AAACGCTGCG 2054
.||.||||||.|..||||..|| |.|||.||.|.|| | |.||||||||
BL02927___yeb 2022 CCAGCTGAAGCGCCAAGGCATG-CAAAAAGAAGAAG-GCCAGACGCTGCG 2069
BSNT_01089 2055 TGATTATGC-AAAACGAATTGATGAAAAATACGACATAGAAGACATGTCA 2103
.||.|.||| ||.||| .||||||| ||| .|.|||
BL02927___yeb 2070 CGAGTTTGCGAAGACG-GTTGATGA-----ACG-----------CTTTCA 2102
BSNT_01089 2104 AAGC--TGACATTAAG--------------CTATGAAAGGGCGCTTTACA 2137
|||| .|||||.|.| .||||||.||||..|.||..
BL02927___yeb 2103 AAGCGGGGACATGACGGCTTTGACTCTTCAATATGAACGGGCTTTGTATC 2152
BSNT_01089 2138 GAAATGAAGATTCTTCGGCGCTA-----TGGAATGATTCGAGAGAGTTAT 2182
||||.||||| ||.||||| ||||||||||||...|||||||
BL02927___yeb 2153 GAAAGGAAGA-----CGCCGCTAAGCTTTGGAATGATTCGGCGGAGTTAT 2197
BSNT_01089 2183 GGGAAAATTTAATTAAAAGAAGATGGTCTTGA 2214
||||||||||||||||||..||||.|
BL02927___yeb 2198 GGGAAAATTTAATTAAAAAGAGATAG------ 2223
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