Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00755 and BL02921
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00755.1.5803.seq
# -bsequence dna-align/BL02921___ydaT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00755-BL02921___ydaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00755-BL02921___ydaT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00755
# 2: BL02921___ydaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 538
# Identity: 335/538 (62.3%)
# Similarity: 335/538 (62.3%)
# Gaps: 116/538 (21.6%)
# Score: 1118.5
#
#
#=======================================
BSNT_00755 1 ATGCGTTTTTATTTTTCACCTGCGGGTACCATTTTTATAAAAGGAAAAGG 50
BL02921___yda 0 -------------------------------------------------- 0
BSNT_00755 51 AGTGATAGACATGCCTTGGTCGATGAAGGATTATCCTGCTTCATTAAAAA 100
|||||.|||||.|||.|.||.||||||||||||||.|||.
BL02921___yda 1 ----------ATGCCATGGTCAATGGAAGACTATCCTGCTTCATTGAAAC 40
BSNT_00755 101 ATCTTGAGAAGCCGGTGAGAAAAAAGGCGATAGACATTGCGAATGCGATG 150
||.|.||.||.|||||||.|||.||.||.||.||.|||||||||||||||
BL02921___yda 41 ATTTGGACAAACCGGTGAAAAAGAAAGCTATTGAAATTGCGAATGCGATG 90
BSNT_00755 151 ATTGATGAAGGCTATGAGGAAGAG-CGCGCGATTCCAATTGCGACAAGCA 199
.||||.|||||.||.||.||| || ||.||.|||||.||||||||.||..
BL02921___yda 91 GTTGACGAAGGATACGACGAA-AGCCGGGCAATTCCGATTGCGACGAGTC 139
BSNT_00755 200 AAGCGAAGGAATGGGCGGAAAACGCCTCTACAGATG--AAATTGATGATT 247
|.|||||||||||||||||.| |||||.| |||..|| |.||
BL02921___yda 140 AGGCGAAGGAATGGGCGGATA--------ACAGAAGCAAAAGCGA-GCTT 180
BSNT_00755 248 ---TCCTGACGCATGA------TGATGAGACAGAACGCGATGCTGATCCA 288
|||| |.||| || .|||||.|||.|||| ||.|||
BL02921___yda 181 AAATCCT-ATGCA-GAAAAAGCCGATGAAACAAAACG---TGGTGA---- 221
BSNT_00755 289 AGCAGCG------GCAGCGGCCCCGAGCTCAT---GAATAAAGCAGAGCA 329
||||| |||||.|.||.||||| | |||.|..|| |||||
BL02921___yda 222 --CAGCGGTTCGAGCAGCAGGCCGGAGCT--TGCGGAAAAGTGC-GAGCA 266
BSNT_00755 330 TGTTATTAAGCATAAAAAAGGCTGGGCAGTCAAAGCCGAGGGCGCCAAAC 379
|||.||.||.|||.|||||||||||||||||||||||||.|.|||.||
BL02921___yda 267 TGTCATCAAACATGAAAAAGGCTGGGCAGTCAAAGCCGAAGACGCTAA-- 314
BSNT_00755 380 GCGTGTC--TGAAATCAAGGATACAAAGAAAGAAGCGATTGAACGGGCAA 427
|||.|.| .|||.|.|||||||||||...||||||..|.||||||||.|
BL02921___yda 315 GCGGGCCAGCGAAGTAAAGGATACAAAAGCAGAAGCCGTCGAACGGGCGA 364
BSNT_00755 428 AGGAAATCGCGGCGCATAAAGGCACTGAGGTCATTGTTCATTTAGCTGAC 477
|.||||||||.|...|||||||.||.|..|||.|.||.|||..|...|||
BL02921___yda 365 AAGAAATCGCCGAAAATAAAGGAACCGCCGTCGTCGTCCATAAAAAAGAC 414
BSNT_00755 478 GGCAGTGTGCAGAGAAAGATTAAAACAGGATCA--TAA 513
||||||||..||.|.||||| ||||||.| ||.
BL02921___yda 415 GGCAGTGTTGAGCGGAAGAT-----CAGGATGAACTAG 447
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