Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03512 and BL02920
See
Amino acid alignment /
Visit
BSNT_03512 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03512.1.5803.seq
# -bsequence dna-align/BL02920.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03512-BL02920.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03512-BL02920.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03512
# 2: BL02920
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity: 87/184 (47.3%)
# Similarity: 87/184 (47.3%)
# Gaps: 68/184 (37.0%)
# Score: 273.0
#
#
#=======================================
BSNT_03512 1 GTGAAAGTGCACCGCATG-----CCAAAAGGTGTTGTCTTAGTCGGAAAA 45
.||||.||..|||||.|| ||..|..||..||||| ||.|||
BL02920 1 ATGAAGGTCTACCGCCTGAATGACCGCATCGTCATGTCT-----GGGAAA 45
BSNT_03512 46 GCATGGGAAATTCGGGCGAAGTTAAAAGAGTATGGACGCACATTTCAATA 95
|||||||||||.||.||.|||.|.||.||.||.|||||.||...|||.||
BL02920 46 GCATGGGAAATCCGCGCCAAGCTGAAGGAATACGGACGAACGCATCACTA 95
BSNT_03512 96 TGTTAAAGATTGGATCTC----AAAGCCATAA------------------ 123
|||.|||||||||.|.|| |||| |.||
BL02920 96 TGTGAAAGATTGGCTTTCTGAAAAAG--AAAATCGCCTGCAAAAGCTTAA 143
BSNT_03512 123 ---------------------------------- 123
BL02920 144 TTTTATTGACATCAAGAAGGGCTGCATGAAATAA 177
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.