Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03510 and BL02914
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03510.1.5803.seq
# -bsequence dna-align/BL02914___yqxK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03510-BL02914___yqxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03510-BL02914___yqxK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03510
# 2: BL02914___yqxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1235
# Identity: 701/1235 (56.8%)
# Similarity: 701/1235 (56.8%)
# Gaps: 271/1235 (21.9%)
# Score: 2081.5
#
#
#=======================================
BSNT_03510 1 ATGAAAAAGATTTACGCGGATTTGCACATTCATATCGGCCGGACCTTTAC 50
BL02914___yqx 0 -------------------------------------------------- 0
BSNT_03510 51 AGGAAGGGCTGTCAAAATAACAGGCGCCAAAACATTAACGCTGGACAGAA 100
BL02914___yqx 0 -------------------------------------------------- 0
BSNT_03510 101 TTTTGGTTGAAGCCAGTGAACATAAAGGAATTGAACTCCTCGGCATTATC 150
||.|||||..||||||||||.
BL02914___yqx 1 -----------------------------ATGGAACTGATCGGCATTATA 21
BSNT_03510 151 GACTGTCATTCTCCGGAAGTCATTCTG---GAGCTTGAGGAAGGCATTTC 197
||.||||||||.||.||.| |.||| ||..||||..||||..|.||
BL02914___yqx 22 GATTGTCATTCACCCGAGG---TGCTGGCCGAAATTGAAAAAGGGGTGTC 68
BSNT_03510 198 ATCTGGAAAATATCGCGAGCTTGACGGGGGAGGAATC--------CGTTA 239
.||.||....|||...||||||||.|..||.|||||| .|.||
BL02914___yqx 69 TTCAGGGCGTTATACAGAGCTTGAAGACGGCGGAATCAAGTATAAAGATA 118
BSNT_03510 240 TCGCAGCACGACT-CTTTTATTGGGGAGCGAGCTGGAGATTTATGATGA- 287
.|| | |||||||..|||...||..||||.||..|||||||
BL02914___yqx 119 CCG---------TGCTTTTATGCGGGTCTGAATTGGAAATCAATGATGAC 159
BSNT_03510 288 AGCTTGTAGCGGACCGATCCATGTGCTCGTATTTATGCCGACGTTGGCTG 337
|| .||..||||.|||||.||||||||.|..|||||||||.||.|..|.|
BL02914___yqx 160 AG-ATGCCGCGGCCCGATTCATGTGCTTGCCTTTATGCCGTCGATCTCCG 208
BSNT_03510 338 ATATGAAACAGTTTTCAAACTGGCTGTCAGCCCGGCTGAAAAATATTCAT 387
..|||||.||||||||...||||||.||||...||.|||..|||||.||.
BL02914___yqx 209 CAATGAAGCAGTTTTCCGGCTGGCTCTCAGAAAGGGTGACGAATATCCAC 258
BSNT_03510 388 TTAAGCTCGCAGCGGATTTATGAAACGGGCTTAAACCTGCAAAAAAAAGT 437
.|.|||||.|||||.||.|||||.||||||.|....||.||....||.||
BL02914___yqx 259 CTGAGCTCCCAGCGCATCTATGAGACGGGCATCGGTCTTCAGCGGAAGGT 308
BSNT_03510 438 GCAGGATATGGGCGGCTTGTTTATCCCCGCCCATATCTTTACGCCGCATA 487
|.|.||..|.||||||.||||.||.|||||.||.||.|||||||||||.|
BL02914___yqx 309 GAAAGAGCTCGGCGGCCTGTTCATTCCCGCGCACATTTTTACGCCGCACA 358
BSNT_03510 488 AAAGCTTATATGGAAAAGGGGTTAAA---TCAAGCTTAACTGAGGTTTTT 534
|.|||.|.||.||||||||.||..|| || |||.|| .||.||.|||
BL02914___yqx 359 AGAGCCTGTACGGAAAAGGAGTCGAATTTTC--GCTGAA-AGAAGTGTTT 405
BSNT_03510 535 GATCCATCTATGATAGACGCGGTGGAGCTTGGATTAAGCTGTGATACAGA 584
||.||....|||||.||.|||||.||.||.||..|.|||.|.||.||.||
BL02914___yqx 406 GACCCGAGGATGATTGATGCGGTTGAACTCGGGCTGAGCAGCGACACCGA 455
BSNT_03510 585 CATGGCATCACACGTATCGCAATTGAATCCGTATCCTTTTTTAACAAATT 634
.|||||.|||||||||||..||.|||||||.|||.|.|||||.||.||||
BL02914___yqx 456 TATGGCTTCACACGTATCCGAACTGAATCCTTATGCATTTTTGACCAATT 505
BSNT_03510 635 CTGATGCGCATTCGTTGGGGAAAATCGGCAGAGAATATAATGAACTATAT 684
|.||.||.|||||..|.||.|||||||||||.||.||||||.|.|
BL02914___yqx 506 CGGACGCCCATTCTCTTGGAAAAATCGGCAGGGAGTATAATAAGC----- 550
BSNT_03510 685 GTGCA----------GTCAGCTGATTTTACTGAATTTGCTCTTGCATTAA 724
|||| |.|||| |||...||.|||.|.|||||.||||
BL02914___yqx 551 -TGCACATCAAACATGCCAGC----TTTCAAGAGTTTTCGCTTGCTTTAA 595
BSNT_03510 725 AGGGACAAGATGACAGGAAAATTATCGCAAATTATGGCTTGGACCCGTTA 774
|.||||||||.|...|.|..|||..|||.|||||.||..||.|.|||...
BL02914___yqx 596 AAGGACAAGAGGGGCGTAGCATTGCCGCGAATTACGGGATGAATCCGCAG 645
BSNT_03510 775 TTGGGGAAATATTATCAGACCGCTTGCGAAGCGTGCGGAGAGCCTGCTGT 824
.||||.|||||||.|||.||||||||.|||.|.||||| ..|.||||.|.
BL02914___yqx 646 CTGGGCAAATATTTTCAAACCGCTTGTGAAACATGCGG-CCGTCTGCAGG 694
BSNT_03510 825 AAGC-GGGGAAAC---------AGCGTGCGCGAATTGCGGAAATGCCAGA 864
|.|| |..||||| ||||||||..| ||.|||| .
BL02914___yqx 695 AGGCAGATGAAACGTTGTGCAAAGCGTGCGGCA---GCCGAAA------G 735
BSNT_03510 865 TTTACCAAGGGAGTCAGCGAAAGATTGCGT-GAATTGAG-----TGATCA 908
|||||.||.||.|||||| ..|||| .|||.||| ||||||
BL02914___yqx 736 TTTACAAAAGGCGTCAGC------ACGCGTCTAATGGAGCTTTATGATCA 779
BSNT_03510 909 GCTTG-AAGTTCGCGTCCCGCGTCCGCGATATGTACATCAGATCCCGCTG 957
|..|| |||..|| |||..|||.||||..||.||.||.|||.|.||||||
BL02914___yqx 780 GGATGAAAGCCCG-GTCAAGCGCCCGCCGTACGTTCACCAGGTTCCGCTG 828
BSNT_03510 958 CAATTTGTTCCGGGTGTAGGCCCGAAAACGCTGGACAAACTAAAAAAAGC 1007
||..|..|.||.||..|.||||||||||||.|..|.||.||.|||.|.||
BL02914___yqx 829 CAGCTGATCCCCGGCATCGGCCCGAAAACGATTCAGAAGCTGAAAGAGGC 878
BSNT_03510 1008 CTTCGCAACAGAAATGGCTGTTCTTCATGAGGC--TGCAGAAGAAGATTT 1055
.||||..||.||||||..|.|.||||| | ||.|.||||||
BL02914___yqx 879 TTTCGGCACTGAAATGAATATACTTCA-----CCGTGTAAAAGAAG---- 919
BSNT_03510 1056 GGCTCGCGTTGT--------CC---CG-CCGAAAACCGCGGCGCTTATCG 1093
|||.|.| || || |||.|.||.||.|.|||..|..
BL02914___yqx 920 -----GCGATCTAAAAGAAACCATTCGTCCGCAGACGGCAGAGCTCGTGA 964
BSNT_03510 1094 TAAAAGCGAGATCCGGAAAACTGGAAT-------TGAAAGCCGGAGGAGG 1136
|.|||||.|| .|||.||.|| |||||||||||||.||
BL02914___yqx 965 TCAAAGCAAG-------GAACGGGGATTTAGAGCTGAAAGCCGGAGGCGG 1007
BSNT_03510 1137 AGGAACCTACGGTAAAAT-------TAAACCGTGA 1164
.||||||||.||.|||.| |||
BL02914___yqx 1008 CGGAACCTATGGAAAAGTGCAGAGCTAA------- 1035
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