Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03518 and BL02912
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03518___yqkC.1.5803.seq
# -bsequence dna-align/BL02912___yqkC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03518___yqkC-BL02912___yqkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03518___yqkC-BL02912___yqkC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03518___yqkC
# 2: BL02912___yqkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity: 174/253 (68.8%)
# Similarity: 174/253 (68.8%)
# Gaps: 26/253 (10.3%)
# Score: 607.5
#
#
#=======================================
BSNT_03518___ 1 GTGGAA-CAAAAGCTGAAGGCAATGAAGAACACAGCACAAAATAAAACGT 49
|.||| ||||||.|.||..|..|.|||.|.||.||.|||||||||||.|
BL02912___yqk 1 -TTGAATCAAAAGGTAAAATCTTTAAAGCAAACCGCTCAAAATAAAACAT 49
BSNT_03518___ 50 GGGTATCCTTCCTGAATCAAAACCATCCTTATACCTTGCTTCACTGGTCA 99
|||..|||||..|..|||||||.|||||.|||||..|.|||||.||||||
BL02912___yqk 50 GGGCGTCCTTTTTACATCAAAATCATCCGTATACACTCCTTCATTGGTCA 99
BSNT_03518___ 100 ATCGGAGGAGCAGAGTCCATCAAGAAAGATGTCTGGCTATTGCAGGATGA 149
||||||||..||||||||.||||.||.|||||||||||..|.||||||||
BL02912___yqk 100 ATCGGAGGGACAGAGTCCGTCAAAAAGGATGTCTGGCTTCTTCAGGATGA 149
BSNT_03518___ 150 AATGACCTTCGAGACGCAGGAGTTTACAACGATAGATCTTGCGATTGA-- 197
|||||||||.||.||..||||.||| |||| |.|||||
BL02912___yqk 150 AATGACCTTTGAAACAAAGGAATTT-----GATA-------CAATTGAGA 187
BSNT_03518___ 198 ----------ATGGATCAGAGAAAATATGGATGGCATTACCGACGTTCTG 237
.||||||.|.||..|||||...|.||||||.||..|.|||
BL02912___yqk 188 CGGCCATCTCCTGGATCGGCGATCATATGAGCGACATTACAGATATCCTG 237
BSNT_03518___ 238 TAA 240
||.
BL02912___yqk 238 TAG 240
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