Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03520 and BL02911
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:31
# Commandline: needle
# -asequence dna-align/BSNT_03520___yqkB.1.5803.seq
# -bsequence dna-align/BL02911___yqkB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03520___yqkB-BL02911___yqkB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03520___yqkB-BL02911___yqkB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03520___yqkB
# 2: BL02911___yqkB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 223/354 (63.0%)
# Similarity: 223/354 (63.0%)
# Gaps: 60/354 (16.9%)
# Score: 734.5
#
#
#=======================================
BSNT_03520___ 1 ATGAACATACATGTGACAGATGCAGC---AAAACAGGCACTGCAGCAGGC 47
||||||| ||| .|||||| .|||||
BL02911___yqk 1 -------------------ATGCAGCTTGAAA----TCACTGC-TCAGGC 26
BSNT_03520___ 48 GTTTGACGCCAACC-------CGGGAAAAAAAGC---------------- 74
|.|.|||.| ||||.||.|.|||
BL02911___yqk 27 -----AAGACAAGCCATTCAACGGGCAACAGAGCCTTATCCTGATAAAAA 71
BSNT_03520___ 75 ---CCAGCTTCGTTACGATGCAGAAGGATGCGGCTGCGCGGTAAGCGGTG 121
||||||.||.||.|||.|.||.||||||||.||||||||.|||||||
BL02911___yqk 72 GATCCAGCTCCGCTATGATTCCGAGGGATGCGGATGCGCGGTCAGCGGTG 121
BSNT_03520___ 122 TCCCGACAATCTGGCTGGCAGAAGAATTAACGGGACAG-TGCGAGCAGCT 170
|.|||....|.||||||.|.||.||||||.||||| || |||||||..||
BL02911___yqk 122 TGCCGGTCTTGTGGCTGACGGACGAATTATCGGGA-AGTTGCGAGCCCCT 170
BSNT_03520___ 171 GGAAACGAACGGCATTCCGCTGTATATCCAATCGTCGCAAAAAGTGTTTT 220
.||.||.|||||..|||||.|.|||||.||.||.|||||||||||.||||
BL02911___yqk 171 TGAGACAAACGGGCTTCCGATTTATATTCAGTCATCGCAAAAAGTCTTTT 220
BSNT_03520___ 221 TTGACGATCAAATGACGATCGATTACAATGAAAAAGCCAAAACATTGGCG 270
||||.||....|||||.|||||.||..||||.|||||.....|.|||..|
BL02911___yqk 221 TTGATGAAGCGATGACCATCGACTATTATGAGAAAGCGGGTGCGTTGATG 270
BSNT_03520___ 271 CTGAAAAGCCCGGCTGAAATGCTCAGCCCCAGAATGAGCATATTAGTAAA 320
|||||.||.|||||..|..||||....|||||||||||.||.|||||.||
BL02911___yqk 271 CTGAAGAGTCCGGCACAGGTGCTTTCTCCCAGAATGAGTATTTTAGTGAA 320
BSNT_03520___ 321 GTAG 324
.|||
BL02911___yqk 321 ATAG 324
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