Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01708 and BL02908
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01708___yhaG.1.5803.seq
# -bsequence dna-align/BL02908___trpP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01708___yhaG-BL02908___trpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01708___yhaG-BL02908___trpP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01708___yhaG
# 2: BL02908___trpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 539
# Identity: 373/539 (69.2%)
# Similarity: 373/539 (69.2%)
# Gaps: 31/539 ( 5.8%)
# Score: 1224.0
#
#
#=======================================
BSNT_01708___ 1 ATGAAAACAAAAGAGTTAGTCATTATGGCTCTGTTTGCCGCAATCGGCGC 50
||||||||||||||.|||||...||||||.|||||||.|||.||.||.||
BL02908___trp 1 ATGAAAACAAAAGAATTAGTGGCTATGGCCCTGTTTGTCGCCATTGGAGC 50
BSNT_01708___ 51 AGCGCTTCATTCCATTATTCCGCCCTTTTTAGGCGGCATGAAACCAGATA 100
.|||||.||..|..|.||||||||.|||||...|||.|||||.||.||||
BL02908___trp 51 GGCGCTGCACGCTGTGATTCCGCCTTTTTTCTACGGAATGAAGCCGGATA 100
BSNT_01708___ 101 TGATGCTGATCATGATGTTCATGGGCATTCTGCTGTTCCCGCGGGTGCAA 150
|||||||||||||||||||.|||||.||.||..|||||||..|..|||||
BL02908___trp 101 TGATGCTGATCATGATGTTTATGGGAATCCTTTTGTTCCCTAGACTGCAA 150
BSNT_01708___ 151 AATGTACTCGTCATCGGGATCGTGACCGGAATCATTTCCGCGCTTACAAC 200
|||||.|||||||||||...||||||.||..|||||||||||.|.||.||
BL02908___trp 151 AATGTTCTCGTCATCGGAGCCGTGACAGGCGTCATTTCCGCGTTGACGAC 200
BSNT_01708___ 201 CGCGTTTCCAGCCGGACAGATCCCCAACATCATTGATAAACCCGTATCAG 250
.||.|||||.|..||||||.|.|||||||||||.||.|||||..||.|||
BL02908___trp 201 GGCTTTTCCCGGGGGACAGCTGCCCAACATCATCGACAAACCGCTAACAG 250
BSNT_01708___ 251 CGTTTCTGTTCTTCTCCCTGTTTCT-CTTGTTCAGAAAGAGCCGA----- 294
|.||..||||||||..|.|.||||| ||||| ||||.|||.||
BL02908___trp 251 CCTTGATGTTCTTCGGCGTATTTCTGCTTGT---GAAAAAGCTGAACAGC 297
BSNT_01708___ 295 AAAACAGGTGCAGCCGCTG-------TGCTGACAGTGATCGGGACC-ATC 336
|||||...|||.|||||.| ||||| || ||.||| .||
BL02908___trp 298 AAAACGCTTGCTGCCGCCGGATTAACTGCTG-CA------GGAACCGTTC 340
BSNT_01708___ 337 TTATCAGGAATTGTGTTTCTATCGTCAGCTTTATTGATCGTCGGTTTACC 386
|| ||.||||...|.||.||..||.|.||..|.||.||.|||||..|.||
BL02908___trp 341 TT-TCCGGAACGATTTTCCTCACGGCTGCACTGTTCATTGTCGGCCTGCC 389
BSNT_01708___ 387 GGG------CGGTTTCGCCGCATTGTTCGCGGCTGTTGTTCTGCCGGCCG 430
.|| .||.|||..|.|..|||||.|.|.|||.|||.|.||.||.|
BL02908___trp 390 TGGAAATCAGGGATTCATCACCCTGTTCTCTGTTGTCGTTTTACCAGCTG 439
BSNT_01708___ 431 CTGTGCTGAATACAATCTCAATGATCATTATTTATCCGATTGTGCAAACC 480
|.|||.|.||.||.|||.|.|||....|.||.|.||||||.|||||..|.
BL02908___trp 440 CCGTGATCAACACGATCGCCATGGCGGTCATCTTTCCGATCGTGCAGTCG 489
BSNT_01708___ 481 ATTTTAAGGCGTTCAAGCTTTATGGAAGCTGCTAAATAA 519
||..|.|.|||||||||..|.||.|||...|..||||||
BL02908___trp 490 ATCATGAAGCGTTCAAGGCTGATTGAACAAGTCAAATAA 528
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