Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01704 and BL02906
See
Amino acid alignment /
Visit
BSNT_01704 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01704___hpr.1.5803.seq
# -bsequence dna-align/BL02906___hpr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01704___hpr-BL02906___hpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01704___hpr-BL02906___hpr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01704___hpr
# 2: BL02906___hpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 455/636 (71.5%)
# Similarity: 455/636 (71.5%)
# Gaps: 39/636 ( 6.1%)
# Score: 1630.5
#
#
#=======================================
BSNT_01704___ 1 ATGAATCGAGTGGAACCGCCCTATGATGTGAAAGAAGCTCTAGTCTTCAC 50
||||||||||.||||..|||||||...|||||||||||.||..|.||||.
BL02906___hpr 1 ATGAATCGAGCGGAAGAGCCCTATACGGTGAAAGAAGCCCTTTTATTCAG 50
BSNT_01704___ 51 CCAGAAAATGGCTCAGCTTAGCAAGGCTCTTTGGAAATCGATCGAGAAGG 100
.||.|.||||||.||||||||||||||.||||||||.|||||.||.||||
BL02906___hpr 51 TCAAAGAATGGCACAGCTTAGCAAGGCGCTTTGGAAGTCGATAGAAAAGG 100
BSNT_01704___ 101 ATTGGCAGCAATGGCTCAAACCGTATGACCTGAATATTAATGAGCATCAT 150
||||||||||.|||.|.|||||.|||||.|||||.|||||.|||||.|||
BL02906___hpr 101 ATTGGCAGCAGTGGATTAAACCTTATGATCTGAACATTAACGAGCACCAT 150
BSNT_01704___ 151 ATTTTATGGATTGCGTATCAATTGAATGGAGCTTCCATTTCTGAAATCGC 200
|||||.|||||.||.||.||..||||.|||||.||||||||.||||||||
BL02906___hpr 151 ATTTTGTGGATCGCCTACCAGCTGAACGGAGCATCCATTTCAGAAATCGC 200
BSNT_01704___ 201 GAAGTTCGGGGTCATGCACGTATCAACCGCATTCAACTTTTCAAAAAAGC 250
.||||||||.||||||||||||||.||.||.||.||.|||||||||||||
BL02906___hpr 201 CAAGTTCGGCGTCATGCACGTATCCACAGCGTTTAATTTTTCAAAAAAGC 250
BSNT_01704___ 251 TGGAAGAACGGGGATATTTAAGGTTCTCCAAACGGCTGAATGATAAACGG 300
|.||.|||.|.||.||..|...|||.||||||....|||||||.|||||.
BL02906___hpr 251 TTGAGGAAAGAGGTTACCTGGAGTTTTCCAAAAAATTGAATGACAAACGC 300
BSNT_01704___ 301 AACACATATGTCCAATTGACTGAGGAAGGTACCGAGGTATTCTGGAGCT- 349
|||||.||..|.||..|||||..|.|||||...||.||.||| ||
BL02906___hpr 301 AACACTTACATTCAGCTGACTCCGAAAGGTGAAGAAGTTTTC-----CTT 345
BSNT_01704___ 350 ----TGCTTGAGGAATTTGATCCGACACGCAACGCTGTTTTTAAAGGGTC 395
|.||.|||...|..||||||||.||.|||||.||.||.|||||..|
BL02906___hpr 346 AAAATCCTCGAGTCTTACGATCCGACCCGGAACGCCGTCTTAAAAGGCGC 395
BSNT_01704___ 396 ACAGCCTTTGTATCATTTATTCGGAAAATTTCCTGAAGTGGCAGAAATGA 445
.|||||..|..||||..|.|.|||.||.|||||.|||.|.|..||.||||
BL02906___hpr 396 TCAGCCCCTTCATCAGCTGTACGGGAAGTTTCCAGAAATCGTCGAGATGA 445
BSNT_01704___ 446 TGTGTATGATACGCCATATCTACGGCGATGATTTTATGGAAATTTTCGAA 495
|||..||.||.||||||||.||||||||||||||.|||||||||||||||
BL02906___hpr 446 TGTCGATCATCCGCCATATTTACGGCGATGATTTCATGGAAATTTTCGAA 495
BSNT_01704___ 496 ACGTCACTCACCAATATTGACAATGACTTTGAAAGCGTAAACGGAAAACT 545
|..||..|..|.||.||.||.|||||.|||...||||.|.|.||.|||.|
BL02906___hpr 496 AAATCGTTTTCAAACATCGAAAATGAATTTACGAGCGAAGAGGGCAAAAT 545
BSNT_01704___ 546 GAAGAAAA------AAGCAAAGGACAG-------------TGCGGCGGAT 576
|||||||| |||||||.|| || .|.||.|||.
BL02906___hpr 546 GAAGAAAAAACAAGAAGCAAAAGA-AGCCGGGGAATCGATAGAGGTGGAC 594
BSNT_01704___ 577 GAACCGGCTGAAGAGCTTGAACCTGTAAACAGTTAA 612
.|||| ||||||.|||.|.||.|..|||
BL02906___hpr 595 AAACC---------GCTTGAGCCTCTTAAAAACTAA 621
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.