Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01704 and BL02906

See Amino acid alignment / Visit BSNT_01704 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_01704___hpr.1.5803.seq
#    -bsequence dna-align/BL02906___hpr.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01704___hpr-BL02906___hpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01704___hpr-BL02906___hpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01704___hpr
# 2: BL02906___hpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity:     455/636 (71.5%)
# Similarity:   455/636 (71.5%)
# Gaps:          39/636 ( 6.1%)
# Score: 1630.5
# 
#
#=======================================

BSNT_01704___      1 ATGAATCGAGTGGAACCGCCCTATGATGTGAAAGAAGCTCTAGTCTTCAC     50
                     ||||||||||.||||..|||||||...|||||||||||.||..|.||||.
BL02906___hpr      1 ATGAATCGAGCGGAAGAGCCCTATACGGTGAAAGAAGCCCTTTTATTCAG     50

BSNT_01704___     51 CCAGAAAATGGCTCAGCTTAGCAAGGCTCTTTGGAAATCGATCGAGAAGG    100
                     .||.|.||||||.||||||||||||||.||||||||.|||||.||.||||
BL02906___hpr     51 TCAAAGAATGGCACAGCTTAGCAAGGCGCTTTGGAAGTCGATAGAAAAGG    100

BSNT_01704___    101 ATTGGCAGCAATGGCTCAAACCGTATGACCTGAATATTAATGAGCATCAT    150
                     ||||||||||.|||.|.|||||.|||||.|||||.|||||.|||||.|||
BL02906___hpr    101 ATTGGCAGCAGTGGATTAAACCTTATGATCTGAACATTAACGAGCACCAT    150

BSNT_01704___    151 ATTTTATGGATTGCGTATCAATTGAATGGAGCTTCCATTTCTGAAATCGC    200
                     |||||.|||||.||.||.||..||||.|||||.||||||||.||||||||
BL02906___hpr    151 ATTTTGTGGATCGCCTACCAGCTGAACGGAGCATCCATTTCAGAAATCGC    200

BSNT_01704___    201 GAAGTTCGGGGTCATGCACGTATCAACCGCATTCAACTTTTCAAAAAAGC    250
                     .||||||||.||||||||||||||.||.||.||.||.|||||||||||||
BL02906___hpr    201 CAAGTTCGGCGTCATGCACGTATCCACAGCGTTTAATTTTTCAAAAAAGC    250

BSNT_01704___    251 TGGAAGAACGGGGATATTTAAGGTTCTCCAAACGGCTGAATGATAAACGG    300
                     |.||.|||.|.||.||..|...|||.||||||....|||||||.|||||.
BL02906___hpr    251 TTGAGGAAAGAGGTTACCTGGAGTTTTCCAAAAAATTGAATGACAAACGC    300

BSNT_01704___    301 AACACATATGTCCAATTGACTGAGGAAGGTACCGAGGTATTCTGGAGCT-    349
                     |||||.||..|.||..|||||..|.|||||...||.||.|||     || 
BL02906___hpr    301 AACACTTACATTCAGCTGACTCCGAAAGGTGAAGAAGTTTTC-----CTT    345

BSNT_01704___    350 ----TGCTTGAGGAATTTGATCCGACACGCAACGCTGTTTTTAAAGGGTC    395
                         |.||.|||...|..||||||||.||.|||||.||.||.|||||..|
BL02906___hpr    346 AAAATCCTCGAGTCTTACGATCCGACCCGGAACGCCGTCTTAAAAGGCGC    395

BSNT_01704___    396 ACAGCCTTTGTATCATTTATTCGGAAAATTTCCTGAAGTGGCAGAAATGA    445
                     .|||||..|..||||..|.|.|||.||.|||||.|||.|.|..||.||||
BL02906___hpr    396 TCAGCCCCTTCATCAGCTGTACGGGAAGTTTCCAGAAATCGTCGAGATGA    445

BSNT_01704___    446 TGTGTATGATACGCCATATCTACGGCGATGATTTTATGGAAATTTTCGAA    495
                     |||..||.||.||||||||.||||||||||||||.|||||||||||||||
BL02906___hpr    446 TGTCGATCATCCGCCATATTTACGGCGATGATTTCATGGAAATTTTCGAA    495

BSNT_01704___    496 ACGTCACTCACCAATATTGACAATGACTTTGAAAGCGTAAACGGAAAACT    545
                     |..||..|..|.||.||.||.|||||.|||...||||.|.|.||.|||.|
BL02906___hpr    496 AAATCGTTTTCAAACATCGAAAATGAATTTACGAGCGAAGAGGGCAAAAT    545

BSNT_01704___    546 GAAGAAAA------AAGCAAAGGACAG-------------TGCGGCGGAT    576
                     ||||||||      |||||||.|| ||             .|.||.|||.
BL02906___hpr    546 GAAGAAAAAACAAGAAGCAAAAGA-AGCCGGGGAATCGATAGAGGTGGAC    594

BSNT_01704___    577 GAACCGGCTGAAGAGCTTGAACCTGTAAACAGTTAA    612
                     .||||         ||||||.|||.|.||.|..|||
BL02906___hpr    595 AAACC---------GCTTGAGCCTCTTAAAAACTAA    621


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