Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01601 and BL02902
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:04
# Commandline: needle
# -asequence dna-align/BSNT_01601___glpD.1.5803.seq
# -bsequence dna-align/BL02902___glpD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01601___glpD-BL02902___glpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01601___glpD-BL02902___glpD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01601___glpD
# 2: BL02902___glpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1710
# Identity: 1255/1710 (73.4%)
# Similarity: 1255/1710 (73.4%)
# Gaps: 84/1710 ( 4.9%)
# Score: 4369.0
#
#
#=======================================
BSNT_01601___ 1 ATGATGAAACATCAATTTTCAAGTCTTGAAAGAGATCG-CATGCTGACAG 49
||| |||.||| .|||||||||.|.|.||.|.|| || ||| .|.||||
BL02902___glp 1 ATG--GAATCAT-TATTTTCAAGCCGTAAACGGGA-CGACAT-TTTACAG 45
BSNT_01601___ 50 -ACATGACGAAAAAAACA----TATGACCTATTTATTATCGGAGGAGGAA 94
|.||||| |||.|| ||||||.|.|||||||||||.|||||.|
BL02902___glp 46 AATATGAC----AAAGCAGAAGTATGACGTGTTTATTATCGGCGGAGGTA 91
BSNT_01601___ 95 TTACAGGAGCCGGAACAGCTCTTGACGCGGCATCAAGGGGAATGAAGGTC 144
||||.||.||.||.||.||..|.||.||.|||||..|.||||||||....
BL02902___glp 92 TTACTGGGGCAGGGACGGCATTGGATGCCGCATCGCGCGGAATGAAAACG 141
BSNT_01601___ 145 GCACTAAGCGAAATGCAGGACTTTGCGGCGGGAACATCAAGCCGATCAAC 194
||.||..|||||||||||||||||||.||.|||||.||||||||.||.||
BL02902___glp 142 GCGCTTTGCGAAATGCAGGACTTTGCAGCCGGAACGTCAAGCCGTTCCAC 191
BSNT_01601___ 195 GAAGCTGGTACATGGC-GGCTTGCGCTATTTAAAACAATTTGAAGTGAAA 243
|||.||.|||||.||| ||||| |||||||||||.|||||||||||||||
BL02902___glp 192 GAAACTTGTACACGGCGGGCTT-CGCTATTTAAAGCAATTTGAAGTGAAA 240
BSNT_01601___ 244 ATGGTCGCTGAGGTAGGAAAAGAGCGGGCGATTGTGTATGAAAACGGCCC 293
|||||.||.|||||.||.||||||||||||||.||.|||||||||||.||
BL02902___glp 241 ATGGTAGCCGAGGTCGGCAAAGAGCGGGCGATCGTCTATGAAAACGGGCC 290
BSNT_01601___ 294 GCATGTCACTACACCGGAATGGATGCTGCTTCCATTTCATAAAGGCGGCA 343
|||.||.||.||.||.|||||||||||||||||..|.|||||.||.||.|
BL02902___glp 291 GCACGTTACAACGCCCGAATGGATGCTGCTTCCGATGCATAAGGGAGGGA 340
BSNT_01601___ 344 CATTTGGTTCATTTACAACATCTATCGGGTTAAGGGTTTATGACTTCCTT 393
|.||.||...|||.|..||.||.|||||..|.|||||.||.|||||..|.
BL02902___glp 341 CTTTCGGCAAATTCAGCACTTCAATCGGACTGAGGGTGTACGACTTTTTG 390
BSNT_01601___ 394 GCAGGTGTGAAAAAGTCAGAACGAAGAAGCATGCTTTCAGCAAAAGAAAC 443
|||||.||.|||||..|.||.||.||.||||||||..|.||..|||||||
BL02902___glp 391 GCAGGCGTCAAAAAAGCTGAGCGGAGGAGCATGCTGACTGCCGAAGAAAC 440
BSNT_01601___ 444 GCTGCAAAAAGAGCCTTTGGTAAAAAAAGACGGCTTAGAA-GGCGGCGGG 492
|||.|||||||||||..|.||.|||||..|||||.| ||| ||||||||.
BL02902___glp 441 GCTTCAAAAAGAGCCGCTCGTGAAAAAGAACGGCCT-GAAGGGCGGCGGC 489
BSNT_01601___ 493 TACTATGTGGAATACCGCACTGACGATGCGAGACTGACCATCGAAGTCAT 542
||.|||||.||||||||.||.||.|||||.|||.||||.|||||||||||
BL02902___glp 490 TATTATGTCGAATACCGGACGGATGATGCCAGATTGACGATCGAAGTCAT 539
BSNT_01601___ 543 GAAGGAAGCGGTGAAATTCGGGGCAGAGCCTGTGAATTACTCCAAAGTGA 592
|||.|||||.||.||||||||.||.|||.|.||.|||||..|.||||| |
BL02902___glp 540 GAAAGAAGCCGTTAAATTCGGAGCCGAGGCCGTCAATTATGCAAAAGT-A 588
BSNT_01601___ 593 AG-GAGCTTCTTTACGAAAAAGGCAAAGCCGTCGGCGTATTAATTGAAGA 641
|| ||..||.|.||.|||||.|||||.|.|..||||||..|.||||||||
BL02902___glp 589 AGCGATTTTATATATGAAAACGGCAAGGTCACCGGCGTGGTCATTGAAGA 638
BSNT_01601___ 642 TGTGCTGACAAAGAAAGAATATAAAGTGTATGCGAAAAAAATTGTCAATG 691
.||..|.||.||.|||...||....||.||.|||||||||||||||||||
BL02902___glp 639 CGTCTTCACGAAAAAAACGTACCGCGTCTACGCGAAAAAAATTGTCAATG 688
BSNT_01601___ 692 CTACAGGCCCTTGGGTCGATCAGCTCAGAGAAAAAGACCATTCGAAAAAC 741
|..|.||.||.||||||||.|..||..|.||||||||||||||.|||.|.
BL02902___glp 689 CCGCGGGGCCGTGGGTCGACCGTCTGCGGGAAAAAGACCATTCAAAAGAA 738
BSNT_01601___ 742 GGAAAGCATTTGCAGCATACAAAAGGCATTCACCTTGTATTTGACCAGTC 791
||.||.||..|.|||||||||||||||.|.||.|||||.|||||.||.||
BL02902___glp 739 GGCAAACACCTTCAGCATACAAAAGGCGTGCATCTTGTTTTTGATCAATC 788
BSNT_01601___ 792 TGTCTTTCCGCTGAAACAGGCTGTATATTTCGATACACCTGATGGCCGGA 841
.||||||||..|.|||||.||.||.|||||.|||||.|||||.|||||.|
BL02902___glp 789 GGTCTTTCCTTTAAAACAAGCCGTTTATTTTGATACGCCTGACGGCCGCA 838
BSNT_01601___ 842 TGGTATTTGCGATTCCTCGTGAAGGCAAAACATACGTGGGAACAACAGAC 891
||||.||.||.|||||..|.||.||.||..||||.||.||.|||||||||
BL02902___glp 839 TGGTGTTCGCCATTCCGAGAGACGGAAAGGCATATGTCGGCACAACAGAC 888
BSNT_01601___ 892 ACTGTTTACAAAGAGGCGCTGGAGCATCCGCGGATGACAACGGAGGATCG 941
||.||.|||||.|||....||||.||.||.||.|||||.||.|..||..|
BL02902___glp 889 ACCGTCTACAACGAGAATTTGGAACACCCTCGAATGACGACAGCAGACAG 938
BSNT_01601___ 942 TGATTATGTCATCAATTCAATCAATTATATGTTCCCGGAACT--GAATAT 989
.|||||||||||||||.|||||||.|||||||||||.||||| || ||
BL02902___glp 939 GGATTATGTCATCAATGCAATCAACTATATGTTCCCTGAACTTGGA--AT 986
BSNT_01601___ 990 CACTG-CGAATGACATCGAATCCAGCTGGGCAGGGCTGCGTCCGCTGATT 1038
||..| |||| ||..|||||||.||||||||.||.||..|.|||||||||
BL02902___glp 987 CAAAGCCGAA-GATGTCGAATCAAGCTGGGCTGGCCTCAGACCGCTGATT 1035
BSNT_01601___ 1039 CATGAAGAAGGCAAAGATCCTTCTGAAATTTCACGGAAAGACGAGATTTG 1088
|||||||||||.|||||.||.||.||.|||||.||.|||||.|||||.||
BL02902___glp 1036 CATGAAGAAGGAAAAGACCCGTCCGAGATTTCCCGAAAAGATGAGATCTG 1085
BSNT_01601___ 1089 GACATCTGACTCAGGCTTGATCACCATTGCCGGCGGAAAACTGACTGGAT 1138
|||.|||||.||.||..|||||||.||.|||||||||||.|||||.||.|
BL02902___glp 1086 GACTTCTGAATCCGGACTGATCACGATCGCCGGCGGAAAGCTGACAGGCT 1135
BSNT_01601___ 1139 ACAGAAAAATGGCGGAGCACATCGTTGATCTTGTACGTGACCGCTTAAAA 1188
|||||||||||||.|||||.|||||.||||||||..|.|||||.||||||
BL02902___glp 1136 ACAGAAAAATGGCTGAGCATATCGTCGATCTTGTCAGAGACCGATTAAAA 1185
BSNT_01601___ 1189 GAAGAAGGCGCAAAG-GATTTTGGCCCGTGTAAAACGAAAAAC-ATGCCA 1236
|||||.|||| |.|| ||.||.||.||.||.|.||| |||||| |||||.
BL02902___glp 1186 GAAGAGGGCG-ACAGAGACTTCGGGCCTTGCAGAAC-AAAAACGATGCCG 1233
BSNT_01601___ 1237 ATCTCAGGCGGGCACGTCGGAGGTTCGAAAAATCTCATGTCCTTCGTTAC 1286
||.||||||||.||..||||.||.||.||||||||...|.|.||..||..
BL02902___glp 1234 ATTTCAGGCGGCCATATCGGCGGCTCCAAAAATCTGGAGGCTTTTATTCA 1283
BSNT_01601___ 1287 CGCGAAAACAAAAGAAGGAATTGCAGCCGGTTTATCAGAAAAAGAC-GCA 1335
.||||||.||...|||||.||||..|||||..|.||.| ||.|||| ||.
BL02902___glp 1284 AGCGAAAGCAGCCGAAGGGATTGAGGCCGGACTGTCCG-AAGAGACGGCC 1332
BSNT_01601___ 1336 AAACAGCT-GGCGATCA-GATACGGCTCTAACGTAGATCGCGTCTTTGAC 1383
|||||..| |.|| || |||||||.||.||||.|||.|||.|.|||||.
BL02902___glp 1333 AAACAAATCGCCG--CACGATACGGTTCGAACGCAGACCGCCTGTTTGAT 1380
BSNT_01601___ 1384 CGGATAGAAGCGCTGAAAGATGAGGCCGCGAAACGCAACATTCCGGTTCA 1433
||.||...|.|||||||||||||.||.||.||||||..|||.||.||.||
BL02902___glp 1381 CGTATTCCATCGCTGAAAGATGAAGCAGCAAAACGCCGCATCCCTGTCCA 1430
BSNT_01601___ 1434 TATTCTTGCTGAGGCAGAATACAGTATAGAAGAAGAGATGACTGCAACCC 1483
|.|.||.||.||....||.|||.|.||.||.|||||.|||.|.||...||
BL02902___glp 1431 TGTACTAGCAGAAATGGATTACGGGATCGAGGAAGAAATGGCAGCCGTCC 1480
BSNT_01601___ 1484 CTGCTGACTTCTTTGTCCGCAGAA-CGGGACGTTTATTTTTTGATATCAA 1532
|.||.||||||||.|||||||||| |||..|| .|.||.|||||.|||||
BL02902___glp 1481 CGGCAGACTTCTTCGTCCGCAGAACCGGTGCG-CTGTTCTTTGACATCAA 1529
BSNT_01601___ 1533 TTGGGTAAGAACATATAAAGA-TGCCGTTATTGATTTTATGAACGAG--- 1578
||||||..|.||.||.||||| .||| |||..||.|..||||.||||
BL02902___glp 1530 TTGGGTCCGCACTTACAAAGAGAGCC-TTACGGACTACATGAGCGAGAAG 1578
BSNT_01601___ 1579 -CGATTCCAATGGGATGAGCAGGCAAAAAACAAACATACAGAAAACC--- 1624
.|| |.|||||| |||.||| .|||..||
BL02902___glp 1579 CTGA----ACTGGGAT-----GGCGAAA-----------CGAAGGCCCGG 1608
BSNT_01601___ 1625 ----TCAA-------CAAG--CTTTTACACGATGCGGTCGTACCGCTTG- 1660
|||| .||| ||..||||||||||.||.||.|||||.|
BL02902___glp 1609 CATGTCAAGGCATTGGAAGGACTACTACACGATGCTGTTGTCCCGCTGGA 1658
BSNT_01601___ 1661 -AGC-AATAA 1668
||| |||.|
BL02902___glp 1659 AAGCAAATGA 1668
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