Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01619 and BL02893
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01619___spoVR.1.5803.seq
# -bsequence dna-align/BL02893___spoVR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01619___spoVR-BL02893___spoVR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01619___spoVR-BL02893___spoVR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01619___spoVR
# 2: BL02893___spoVR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1421
# Identity: 1121/1421 (78.9%)
# Similarity: 1121/1421 (78.9%)
# Gaps: 25/1421 ( 1.8%)
# Score: 4426.0
#
#
#=======================================
BSNT_01619___ 1 TTGA----ACGCGGAGGAG-AAGAAGGGATTACAGCGGGCAATTGAGGAA 45
|||| ||| |||| ||.|||.| .|.||||||||.|||||.|||
BL02893___spo 1 TTGAGCATACG----GGAGCAAAAAGAG-CTGCAGCGGGCGATTGAAGAA 45
BSNT_01619___ 46 ATTACCGAAATTGCAAAAGGATTCGGCCTTGATTTCTACCCGATGAGATA 95
|||||.|||||.||..|||||||||||||||||||.||||||||||||||
BL02893___spo 46 ATTACGGAAATCGCGGAAGGATTCGGCCTTGATTTTTACCCGATGAGATA 95
BSNT_01619___ 96 TGAAATCTGCCCGGCTGAAATTATTTATACATTTGGCGCGTACGGGATGC 145
|||.||.||.||.||||||||||||||||||||.||.||.||||||||||
BL02893___spo 96 TGAGATTTGTCCTGCTGAAATTATTTATACATTCGGTGCATACGGGATGC 145
BSNT_01619___ 146 CGACAAGATTCAGCCACTGGAGCTTCGGCAAGCAGTTTCACAAGATGAAG 195
|||||||||.||||||.|||||.|||||.|||||.||||||||.||||||
BL02893___spo 146 CGACAAGATACAGCCATTGGAGTTTCGGAAAGCAATTTCACAAAATGAAG 195
BSNT_01619___ 196 CTGCACTATGATCTAGGGTTAAGTAAGATCTATGAGCTGGTCATTAACTC 245
||.||||||||..|.||.||.||.||.||.||||||||.||||||||.||
BL02893___spo 196 CTTCACTATGACTTTGGCTTGAGCAAAATATATGAGCTTGTCATTAATTC 245
BSNT_01619___ 246 AGATCCATGCTACGCTTTTTTGCTGGACAGCAACTCACTGATCCAAAATA 295
||||||.||.||.||.|||||||||||||||||.|||.||||.|||||||
BL02893___spo 246 AGATCCGTGTTATGCGTTTTTGCTGGACAGCAATTCATTGATTCAAAATA 295
BSNT_01619___ 296 AATTGATTGTCGCACACGTTCTTGCTCATTGCGATTTCTTCAAAAACAAC 345
|..||||||||||||||||.|||||||||||.||||||||.|||||.|||
BL02893___spo 296 AGCTGATTGTCGCACACGTCCTTGCTCATTGTGATTTCTTTAAAAATAAC 345
BSNT_01619___ 346 TGCCGTTTCCAAAACACGAAGCGCGATATGGTGGAAAGCATGGCGGCAAC 395
||||||||.|||||.|||||||||||||||||.|||||||||.||||.||
BL02893___spo 346 TGCCGTTTTCAAAATACGAAGCGCGATATGGTTGAAAGCATGTCGGCGAC 395
BSNT_01619___ 396 AGCTGAACGGATAAAACACTATGAACAGGTTCACGGGATAAAAGAAGTCG 445
|||.||.|||||.|||||.||||||..|||.|||||...|||||||||||
BL02893___spo 396 AGCAGAGCGGATTAAACATTATGAAACGGTACACGGTTCAAAAGAAGTCG 445
BSNT_01619___ 446 AATCTTTTTTAGATGCAATCCTTTCGATTCAGGAGCATATCGATCCGTCG 495
||.|.|||.|.|||||..|.||..|||||.|.||.||.||.||.||.|||
BL02893___spo 446 AAGCATTTCTCGATGCGGTGCTGGCGATTGAAGAACACATTGACCCTTCG 495
BSNT_01619___ 496 TTGGTCCGACCAAAGCTCCAATGGAGTGTGGATGAT---GAGGAAGAGGA 542
.|.||..|.||.|||||....|||||.||.|||||| ||||||||.||
BL02893___spo 496 CTCGTGAGGCCGAAGCTGTCGTGGAGCGTAGATGATGAAGAGGAAGAAGA 545
BSNT_01619___ 543 GATTGAAGAGGCAGCCACGCCTTACGATGATCTATGGTCATTGGATGAAA 592
.|..|..|.|.|.|||||.|||||.||.||.||.|||..|.|||||.|.|
BL02893___spo 546 AACCGGCGCGCCGGCCACTCCTTATGACGACCTCTGGGAACTGGATCATA 595
BSNT_01619___ 593 A------GAAACCGAAAAAACAAGTGAAAAAATCGAAAAAACCGTTCCCG 636
| ||||..|||.|| |||||...||||||||..|||.|||
BL02893___spo 596 AAGGATCGAAAGAGAAGAA------GAAAAGGACGAAAAAAAAGTTTCCG 639
BSNT_01619___ 637 CCGCGGCCTGAAAAAGATATCCTGCTTTTTATCGAGGAGCATTCCCGGGA 686
|||...||.||||||||.||.|||||.||.||.||.||||||||.|||||
BL02893___spo 640 CCGAAACCGGAAAAAGACATTCTGCTGTTCATAGAAGAGCATTCGCGGGA 689
BSNT_01619___ 687 GCTGGAGCCATGGCAGCGTGATATATTAACGATGATGAGAGAGGAAATGC 736
|||||||||.||||||||.|||||.|||||||||||||||||||||||||
BL02893___spo 690 GCTGGAGCCTTGGCAGCGCGATATTTTAACGATGATGAGAGAGGAAATGC 739
BSNT_01619___ 737 TTTATTTCTGGCCTCAGCTGGAAACCAAGATTATGAATGAGGGCTGGGCT 786
|.|||||||||||.|||||.|||||.||.||.||||||||.||||||||.
BL02893___spo 740 TGTATTTCTGGCCGCAGCTTGAAACGAAAATCATGAATGAAGGCTGGGCG 789
BSNT_01619___ 787 TCCTATTGGCACCAGCGAATTATACGTGAGCTTGATTTAACCTCTGATGA 836
|||||||||||.||||||||.||.||||||||||||.|.||.||...|||
BL02893___spo 790 TCCTATTGGCATCAGCGAATCATCCGTGAGCTTGATCTGACATCAAGTGA 839
BSNT_01619___ 837 AGCGATCGAGTTCGCCAAGCTGAATGCAGGTGTCGTTCAGCCGTCCAAAA 886
|||||||||.||||||||||||||.||.||.||.||||||||||||||||
BL02893___spo 840 AGCGATCGAATTCGCCAAGCTGAACGCGGGAGTGGTTCAGCCGTCCAAAA 889
BSNT_01619___ 887 CAGGCATTAATCCTTATTATTTAGGGCTAAAAATATTTGAAGACATTGAG 936
|.||.||.||||||||||||.|.||..|.|||||||||||.|||||.|||
BL02893___spo 890 CGGGAATCAATCCTTATTATCTCGGATTGAAAATATTTGAGGACATAGAG 939
BSNT_01619___ 937 GAGAGGTACAACAACCCGACGGAGGAAATGAAGAAAATGGGCGTGCAGCC 986
|||.|.||||||||||||||.||.||.|||||.||.|||||.||..||||
BL02893___spo 940 GAGCGCTACAACAACCCGACAGAAGACATGAAAAAGATGGGGGTAGAGCC 989
BSNT_01619___ 987 TGACTCCGGCCGGGAGAAAATGTTTGAGGTCAGGGAGATTGAATCCGATA 1036
..||||.||..|.||.|||||.|||||.|||||||||||.|||||.||.|
BL02893___spo 990 GAACTCTGGGAGAGAAAAAATATTTGAAGTCAGGGAGATCGAATCAGACA 1039
BSNT_01619___ 1037 TCTCTTTCATCCGCAATTATTTAACCAAAGAATTAGTCATGCGCGAGGAT 1086
|.||.||.|||.|.||.||||||||.||.||..|.||.|||||.||.||.
BL02893___spo 1040 TTTCATTTATCAGGAACTATTTAACGAAGGATCTTGTGATGCGGGAAGAC 1089
BSNT_01619___ 1087 CTTTATTTGTTTCAAAAACAGGGCCGAGATTATAAAATCATCGATAAACA 1136
||.||.|||||||||||||||||..|.||||||||||||.||||.||..|
BL02893___spo 1090 CTCTACTTGTTTCAAAAACAGGGAAGGGATTATAAAATCGTCGACAAGGA 1139
BSNT_01619___ 1137 GTGGAAGTCGGTGCGCGACCAGCTCGTAAGCATGCGGGTAAATGGCGGTT 1186
.|||.||.|.||||||||.|||||.||.||||||.|.||.||.||.||.|
BL02893___spo 1140 TTGGGAGGCTGTGCGCGATCAGCTTGTCAGCATGAGAGTCAACGGAGGAT 1189
BSNT_01619___ 1187 TTCCATATTTGACAGTAAACGATGGCGATTATATGAAAAATAACGAGCTC 1236
||||.|||||||||||..|.||.||.|||||..|.||.||.||.||..|.
BL02893___spo 1190 TTCCTTATTTGACAGTTGAGGACGGAGATTACTTAAAGAACAATGAATTA 1239
BSNT_01619___ 1237 TATATTAAGCATTGGTATGAAGGAATAGAGTTAGATTTGAAATATTTGGA 1286
||.||.|||||||||||||||||.||.||..|.||||||||.|||.|.||
BL02893___spo 1240 TACATCAAGCATTGGTATGAAGGGATCGAACTCGATTTGAAGTATCTTGA 1289
BSNT_01619___ 1287 GAAAGTGCTCCCTTATTTATTCCAGCTTTGGGGAAGAAGCGTGCACATTG 1336
.|||||.||.|||||..|...||||||.|||||||||||||||||..|.|
BL02893___spo 1290 AAAAGTTCTGCCTTACCTCCACCAGCTATGGGGAAGAAGCGTGCATGTCG 1339
BSNT_01619___ 1337 AGTCTGTGCTTGAGGATAAGGAAGTCATGTTTTCGTACGACGGAAAAGGT 1386
||.|.|||||.||.|||||....|||||||||||.||.||.|||||.|.|
BL02893___spo 1340 AGACCGTGCTCGAAGATAAACCCGTCATGTTTTCCTATGATGGAAAGGCT 1389
BSNT_01619___ 1387 GTTCACCGCAGATATTTATAA 1407
||.||||||||||||||||||
BL02893___spo 1390 GTCCACCGCAGATATTTATAA 1410
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