Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01625 and BL02891
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01625___citA.1.5803.seq
# -bsequence dna-align/BL02891___citA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01625___citA-BL02891___citA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01625___citA-BL02891___citA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01625___citA
# 2: BL02891___citA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1159
# Identity: 782/1159 (67.5%)
# Similarity: 782/1159 (67.5%)
# Gaps: 125/1159 (10.8%)
# Score: 2450.0
#
#
#=======================================
BSNT_01625___ 1 ATGGTACATTACGGATTAAAGGGAATTACATGTGTAGAAACATCCATCAG 50
|||||..||.|.||.|||||.||.|||||.|||||.||||||.|||||||
BL02891___cit 1 ATGGTTTATCATGGGTTAAAAGGGATTACTTGTGTTGAAACAGCCATCAG 50
BSNT_01625___ 51 CCATATTGATGGTGAAAAAGGGCGTCTGATTTACAGAGG--ACATCATGC 98
||..|||||.|||||||||||....|||||.|||||||| ||| ||||
BL02891___cit 51 CCGCATTGACGGTGAAAAAGGAAAGCTGATCTACAGAGGGTACA--ATGC 98
BSNT_01625___ 99 AAAAGACATCGCACTGAATCAT--AGCTTTGAAGAAGCGGCTTATTTGAT 146
..|.||..|.||.|| .||.| |..||||||||||..|||||..||||
BL02891___cit 99 TGATGAACTGGCGCT--TTCGTCCACATTTGAAGAAGTCGCTTACCTGAT 146
BSNT_01625___ 147 TTTATTTGGAAAAC--GGCCTT--CAACTGAA---GAATT--GCAGGTAT 187
|.| .||| |||.|| |.||.||| |||.| |||| ||
BL02891___cit 147 TCT-------CAACGGGGCATTTCCGACGGAAGCTGAACTCAGCAG--AT 187
BSNT_01625___ 188 TTAAAGATAAGCTGGCTGCGGAACGGAAT--------CTTCCGGAA-CAT 228
|.||.||...|||.|||.| || |||||.||| |||
BL02891___cit 188 TCAATGAGCTGCTCGCTTC--------ATTTCGTGTGCTTCCAGAAGCAT 229
BSNT_01625___ 229 ATTGAGCGCTTGAT--TCAATC--ACTGCCAAACAACATGGACGATATGT 274
..|||||.||||| .||.|| .|.|||.|| .|.|||||||||.
BL02891___cit 230 -GCGAGCGATTGATCCGCAGTCTTCCGGCCGAA----TTAGACGATATGG 274
BSNT_01625___ 275 CGGTGCTGAGAACGGTTGTTTCAGCATTGGGGGAAAATA-CGTACACATT 323
||||.|||.|.||||..||.||..||||.|||| |.||| |||...|.||
BL02891___cit 275 CGGTTCTGCGCACGGCCGTCTCTTCATTCGGGG-ACATATCGTTTGCGTT 323
BSNT_01625___ 324 CCATCCGAAAACAGAAGAAGCAATCCGGCTGATTGCAATCACGG------ 367
|.|.||||.||..||..|.||..||.||||||||| |||
BL02891___cit 324 CAAGCCGACAATGGAGCAGGCCCTCAGGCTGATTG------CGGCCGTCC 367
BSNT_01625___ 368 CTTCCATCATTGCATACAGAAAAAGATGGACGCGCGGTGA---ACAAGCA 414
|.||.||.||.||.|.|||||| ||.||..|.||| |.|||
BL02891___cit 368 CGTCAATTATCGCGTTCAGAAA------GAGGCTGGCTGATGGAGAAG-- 409
BSNT_01625___ 415 ATTGCACCTTCTTC--CC--------AG-TACGGACATGTCGAAAACTAC 453
|.|.|.||| || || || ||...|||.|||||.||.
BL02891___cit 410 -----AGCCTGTTCAGCCGCTGGATGAGCTA-GGTTTTGTGGAAAATTAT 453
BSNT_01625___ 454 TATTATATGCTCACAGGCGAACAGCCTTCAGAGGCAAAAAAGAAAGCGCT 503
|.|||.|||||.|.|||..|.|..||..||||.||..|.||.||||||||
BL02891___cit 454 TTTTACATGCTGAAAGGAAAGCGTCCGACAGAAGCTCAGAAAAAAGCGCT 503
BSNT_01625___ 504 TGAAACCTATATGATTCTGGCCATGGAGCACGGCATGAACGCATCGACTT 553
||||||.||.||||||||.||.|||||.||.|||||||||||.||.||.|
BL02891___cit 504 TGAAACGTACATGATTCTTGCGATGGAACATGGCATGAACGCTTCAACCT 553
BSNT_01625___ 554 TTTCGGCACGAGTCACGTTATCAACAGAGAGTGATTTAGTGTCAGCCGTC 603
||||||||.|.||.|||.|.||.||.||....|||.|.||.||.||||||
BL02891___cit 554 TTTCGGCAAGGGTTACGGTGTCTACGGAATCCGATCTTGTTTCTGCCGTC 603
BSNT_01625___ 604 ACGGCTGCTCTCGGCACGATGAAAGGTCCGCTTCACGGAGGCGCTCCTTC 653
||..||||.||.||||||||||||||.||..|.|||||.||.||.||.||
BL02891___cit 604 ACATCTGCACTTGGCACGATGAAAGGACCTTTGCACGGCGGAGCGCCGTC 653
BSNT_01625___ 654 TGCGGTGACAAAAATGCTTGAAGACATTGGAGAAAAAGAACATGCTG-AA 702
|||||||||..|.|||||.||||.|||.||.||||||.|.||.|||| ||
BL02891___cit 654 TGCGGTGACGGATATGCTGGAAGGCATCGGGGAAAAACAGCACGCTGAAA 703
BSNT_01625___ 703 GCATATCTGAAAGAAAAACTCGAAAAAGGAGAGCGCTTGATGGGATTCGG 752
|| |||.|.|.||||||.||.||||||||.|||.|..||||||||||.||
BL02891___cit 704 GC-TATATAAGAGAAAAGCTTGAAAAAGGCGAGAGACTGATGGGATTTGG 752
BSNT_01625___ 753 CCACAGGGTGTACAAAACAAAAGACCCGCGGGCAGAA-GCTTTGAGACAG 801
.|||.|.||.||.|||||..|.||.|||.|.|| ||| |||||.||...|
BL02891___cit 753 ACACCGCGTCTATAAAACGCATGATCCGAGAGC-GAAGGCTTTAAGGGTG 801
BSNT_01625___ 802 AAAGCAGAACAGGTGGCCGGCAATGACCGTGATCTTGATCTTGCGCTGCA 851
|||||.||..|..|.|||||....|||.|.|||.|.||.|||||.||.||
BL02891___cit 802 AAAGCCGAGGAAATTGCCGGGGGCGACAGGGATATCGACCTTGCTCTTCA 851
BSNT_01625___ 852 TGTAGAAGCAGAA----GCGATTCG---TTTACTAGAAATCTACAAACCG 894
|||.||| || |||||.|| |||...|||| |||||.|||
BL02891___cit 852 TGTTGAA----AATACGGCGATCCGCCTTTTGGAAGAA---TACAAGCCG 894
BSNT_01625___ 895 GGACGAAAGCTGTACACAAATGTTGAATTTTACGCGGCTGCAGTGATGAA 944
||.||.|||||.||.||.|||||.|||||||||||.||.||.||||||||
BL02891___cit 895 GGCCGCAAGCTTTATACGAATGTCGAATTTTACGCAGCCGCTGTGATGAA 944
BSNT_01625___ 945 GGCCATCGATTTTGACGATGAGTTGTTTACTCCGACCTTTTCAGCAAGC- 993
|||.|||||||||||.|..|..|||||.||.||.||.|||||.|| |||
BL02891___cit 945 GGCGATCGATTTTGATGCCGCATTGTTCACCCCTACTTTTTCGGC-AGCG 993
BSNT_01625___ 994 CGAATGGTAGGGTGGTGCGCCCATGTGCTGGAACAGGCAGAAAACAACAT 1043
.|||||||.||.|||||||||||||||||.||.|||||.||.||||||||
BL02891___cit 994 AGAATGGTCGGCTGGTGCGCCCATGTGCTTGAGCAGGCTGACAACAACAT 1043
BSNT_01625___ 1044 GATTTTCCGCCCGTCAGCGAAATATACCGGTGCCATTCCCGAGGAAGTTC 1093
|||||||.|.||.||.||.||||||..|||.| .||| |.||
BL02891___cit 1044 GATTTTCAGGCCATCGGCTAAATATGTCGGAG-AATT---------GGTC 1083
BSNT_01625___ 1094 TTTCA-TAA 1101
|..|| |||
BL02891___cit 1084 TCACAGTAA 1092
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