Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01640 and BL02884

See Amino acid alignment / Visit BSNT_01640 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence dna-align/BSNT_01640___yhdO.1.5803.seq
#    -bsequence dna-align/BL02884.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01640___yhdO-BL02884.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01640___yhdO-BL02884.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01640___yhdO
# 2: BL02884
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity:     467/608 (76.8%)
# Similarity:   467/608 (76.8%)
# Gaps:          16/608 ( 2.6%)
# Score: 1722.5
# 
#
#=======================================

BSNT_01640___      1 ATGTATAAGTTTTGTGCAAATGCTTTAAAAGTTATTCTTTCTCTTCGCGG     50
                     ||||||.|.|||..||...|||||..|||||..|||||||||.|.|||||
BL02884            1 ATGTATCAATTTACTGGTTATGCTGCAAAAGCGATTCTTTCTTTGCGCGG     50

BSNT_01640___     51 AGGAGTGAAGGTGTATAACAAAGAAAACCTTCCGGCCGATTCAGGTTTTG    100
                     .|||.|.||.||.||.||.||||||||.|||||....||..|||||||.|
BL02884           51 CGGAATTAAAGTATACAATAAAGAAAATCTTCCTAAAGACACAGGTTTCG    100

BSNT_01640___    101 TCATCGCGTGTACACATTCCGGCTGGGTTGATGTGATTACACTCGGAGTC    150
                     |.||.||.||.||||||.|.||.|||||.|||||..|..||||.||.|||
BL02884          101 TTATTGCCTGCACACATGCAGGATGGGTGGATGTCGTCGCACTGGGTGTC    150

BSNT_01640___    151 GGGATTCTTCCTTAT-CAAATACACTACATGGCGAAAAAAGAGCTTTTTC    199
                     ||.||| ||.|.||| .||||.||.||||||||||||||||||||||||.
BL02884          151 GGCATT-TTGCCTATGGAAATTCATTACATGGCGAAAAAAGAGCTTTTTG    199

BSNT_01640___    200 AAAATAAATGGATCGGTTCGTTTC--TGAAGAAAATTC-ATGCTTTTCCG    246
                     |||||||||..|.||||||.||||  |.|||.|   || |.||||||||.
BL02884          200 AAAATAAATTAAGCGGTTCTTTTCTTTCAAGCA---TCAACGCTTTTCCC    246

BSNT_01640___    247 GTAGATCGGGAAAATCCCGGGCCAAGCAGTATTAAAACGCCGATTAAGCT    296
                     ||.||..||||||||||||||||||||||.||.|||||.|||||.|||||
BL02884          247 GTCGACAGGGAAAATCCCGGGCCAAGCAGCATCAAAACCCCGATCAAGCT    296

BSNT_01640___    297 GCTGAAAGAAGGAGAGATCGTCGGTATCTTCCCAAGCGGAACAAGAACCT    346
                     |.|||||||||||.|.||||||||.||.||||||||||||||.|||.|.|
BL02884          297 GTTGAAAGAAGGAAAAATCGTCGGCATTTTCCCAAGCGGAACGAGATCAT    346

BSNT_01640___    347 CTGAGGATGTGCCTTTGAAAAGAGGTGCGGTGACGATTGCGCAAATGGGG    396
                     ||||.||.||.||.|||||||||||.||.||.|||||.||.||.|||||.
BL02884          347 CTGAAGACGTTCCATTGAAAAGAGGGGCTGTCACGATCGCCCAGATGGGA    396

BSNT_01640___    397 AAAGCGCCGCTTGTCCCCGCTGCATATCAG-GGCCCTTCAAGCGGAAAAG    445
                     ||||||||||||||.||.|||||||| ||| ||||||||.|.||||||||
BL02884          397 AAAGCGCCGCTTGTGCCGGCTGCATA-CAGCGGCCCTTCCAACGGAAAAG    445

BSNT_01640___    446 AATTATTCAAAAAAGGAAAAATGAAGCTGATTATCGGTGAGCCTCTTCAC    495
                     |..|.|||||.|.|||.||||||||.|||||.|||||.||.||.||..|.
BL02884          446 AGCTTTTCAAGAGAGGCAAAATGAAACTGATCATCGGCGAACCGCTCAAT    495

BSNT_01640___    496 CAGGCTGATTTTGCCCA--CCTGCCTTCAAAGGAAAGACTTG-CAGCAAT    542
                     ||||..|||||.||.||  .||  |.|||||.||||..||.| || .|||
BL02884          496 CAGGAAGATTTCGCTCAATACT--CGTCAAAAGAAAAGCTGGTCA-AAAT    542

BSNT_01640___    543 GACAGAGGCTTTGAATCAGCGGATTAAAGAACTAGAGAATAAACTTGATC    592
                     |||.||||||||||||.|..|.|||||||...|.|||||.||.||.||.|
BL02884          543 GACGGAGGCTTTGAATGACAGTATTAAAGCTTTGGAGAAAAAGCTGGAGC    592

BSNT_01640___    593 AGCTATAA    600
                     ||||||||
BL02884          593 AGCTATAA    600


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