Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01676 and BL02871
See
Amino acid alignment /
Visit
BSNT_01676 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01676___yheB.1.5803.seq
# -bsequence dna-align/BL02871___yheB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01676___yheB-BL02871___yheB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01676___yheB-BL02871___yheB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01676___yheB
# 2: BL02871___yheB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1244
# Identity: 787/1244 (63.3%)
# Similarity: 787/1244 (63.3%)
# Gaps: 223/1244 (17.9%)
# Score: 2367.5
#
#
#=======================================
BSNT_01676___ 1 ATG--GGTA-TTGCAGGAACCTTTATTT----TTATGATCGTGATCGGCG 43
||| .||| ||| ||| |.||| |||||||.|...||||.|
BL02871___yhe 1 ATGTATGTATTTG--GGA-----TTTTTGCCGTTATGATTGCAGTCGGTG 43
BSNT_01676___ 44 CTGCCATTGGAGCGGTGACCAATCATTTAGCAATTCAAATGCTGTTTAGG 93
|....||.||.||.||.||.||||||||.||.|||.|||||||.|||.|.
BL02871___yhe 44 CACTTATCGGCGCTGTAACGAATCATTTTGCGATTAAAATGCTTTTTCGC 93
BSNT_01676___ 94 CCGTATAAAGCGTACTATTTGTTTGGGAAGCGAGTTCCTTTTACGCCCGG 143
||.|||||||||..|||..|.|||||.|||||.||.||||||||||||||
BL02871___yhe 94 CCCTATAAAGCGATCTACATATTTGGAAAGCGGGTACCTTTTACGCCCGG 143
BSNT_01676___ 144 GCTGATTCCAAGACGGCGAGATGAACTTGCAAAACAAATGGGACTGATGG 193
..|.|||||.|.|.||||.||||||.|.||.|.|||.|||||||.|||||
BL02871___yhe 144 ATTAATTCCGAAAAGGCGCGATGAATTGGCGAGACAGATGGGACAGATGG 193
BSNT_01676___ 194 T---AGTCAATCATCTCTTAACCCCTGAAGGCATTAAAAAGCGGCTCGTC 240
| ||.| |||||..|.||..|.|||||..|.|||||..||||.|..
BL02871___yhe 194 TCACAGGC---CATCTGCTGACAACAGAAGGGCTCAAAAAAAGGCTTGCA 240
BSNT_01676___ 241 TCTGATGCAGCCAAAACGCAGGCTCTTCGAGTGGGGGAACAGCTGATTCA 290
||.|||||.|.|||||..|||||..|.|..||.||.||...||| ||
BL02871___yhe 241 TCCGATGCGGTCAAAAGCCAGGCGGTGCAGGTTGGAGAGAGGCT--TT-- 286
BSNT_01676___ 291 AAAGCTGTC---ACTTTCTGAA------GTGACAGTAAAAGAAGCGCTTG 331
||.| .||.||..|| |..||.||..|||||||..|.|
BL02871___yhe 287 -----TGGCCCGCCTCTCGCAATCAACGGCCACCGTTGAAGAAGCATTGG 331
BSNT_01676___ 332 AAAAAGC--CGGGAT---GAAGCGCCCCGAAAAAGCTGCTGATGCATGGA 376
||||| |||||| .||.|.|.||.||||||| |||
BL02871___yhe 332 --AAAGCATCGGGATTTCAAACCCCGCCCAAAAAGC-----------GGA 368
BSNT_01676___ 377 TC-AG-------CAGCTGGACCGATGATAAGCTGA----ATGAGCTTTT- 413
|| || |||.|.|.|.|||||.||||||| || ||||
BL02871___yhe 369 TCGAGCGGTATCCAGATTGGCGGATGAGAAGCTGACCGCAT----TTTTA 414
BSNT_01676___ 414 ---CCGCCAATACGGGCACCAATCGTTAAAAGAGCTGGTGCCTATAGAGG 460
.|| ||.|.|.|..||.||.|.|||.||||..|.|||.|.||||
BL02871___yhe 415 GAGGCG----TATGAGAATGAACCGCTGAAAAAGCTTTTCCCTCTTGAGG 460
BSNT_01676___ 461 TGCAGGAAAAGCTTGAAGAAAAGATTCCGATGATTTCAGGATATATATTG 510
..||.||||||||..|||||||.|||||||||.|.||..|.|||||.||.
BL02871___yhe 461 CTCAAGAAAAGCTGAAAGAAAAAATTCCGATGGTGTCCAGCTATATTTTA 510
BSNT_01676___ 511 TCACGGAGTGTCCGTTATTTTGAAAGTGATGAAGGAAA--AATCCGTCTT 558
...|||..||||.|.||.||||||||.||||||||.|| || ||.||.
BL02871___yhe 511 AGCCGGGCTGTCAGCTACTTTGAAAGCGATGAAGGCAAGGAA--CGCCTC 558
BSNT_01676___ 559 GGCAATATGATTGATGACTTTTTAAAAGAGCGCGGCATGCTTGGAAGCAT 608
||..||||||||||.||.|||||.|||||.||.||||||||.||.|||||
BL02871___yhe 559 GGACATATGATTGACGATTTTTTGAAAGAACGGGGCATGCTCGGCAGCAT 608
BSNT_01676___ 609 GGTGCAAATGTTTCTTGGCAATTCA--AGCCTTGCGGATCGCGTGCTGCC 656
||||||.||||||.|.||||| || ||.||.|..||.||.||.|.|||
BL02871___yhe 609 GGTGCAGATGTTTTTAGGCAA--CAGCAGTCTGGTTGACCGGGTTCAGCC 656
BSNT_01676___ 657 GGAGCTGCTGAAATTCTTGCGCAATGA--------------GGAAACAAA 692
||||.|..||||.||.|| ||.|| ||
BL02871___yhe 657 GGAGATTGTGAAGTTTTT----AAAGAACGGCGAGACCGCGGG------- 695
BSNT_01676___ 693 TAAATTGCTTTCT----GATCT-CTTAAAAAACGAATGGGGCAAGCTGAG 737
||||| | ||||| ||| .||||||||||||.||||||||.
BL02871___yhe 696 ------GCTTT-TACAGGATCTGCTT-GAAAACGAATGGGACAAGCTGAA 737
BSNT_01676___ 738 GGAGTATACGTTTAATGAAGCAGATGAAAAATGGAA--TGCAAAGGCGCT 785
.||.||||||||.||.|||||||||||.|||||||| | |||| .|.||
BL02871___yhe 738 AGAATATACGTTCAAGGAAGCAGATGACAAATGGAACCT-CAAA-CCTCT 785
BSNT_01676___ 786 CATTTTCAGTTTGAAACGAAGAG-TGCTGCAAGCATTTTCGACTGC--CC 832
|||||||..|||| ||.|||.|| |..||.||..|||.||| ||.| ||
BL02871___yhe 786 CATTTTCGATTTG-AAGGAAAAGCTTTTGAAACGATTCTCG-CTTCAGCC 833
BSNT_01676___ 833 CTTTCTTCGACAATACGATTGGCACGCTTACCGTCCGCTATGAATC---- 878
.||| |||||.||.|||||.||| |||.|||| .||
BL02871___yhe 834 GTTT-TTCGAAAAGACGATAGGC----------TCCTCTAT--TTCCAGT 870
BSNT_01676___ 879 --TGAGCTG-------------ACC--CAGCAAATGCTGCCGGCACTG-- 909
|||||.| .|| |.|||.||| |||| ||.|
BL02871___yhe 871 TTTGAGCAGGATATCGCTTTGCGCCTTCCGCAGATG--GCCG--ACCGCC 916
BSNT_01676___ 910 TTAGACAAATTGCTTGAAGGGATTTCGTCCAA-----------CCTTGA- 947
|| ||.|||| || ||||||
BL02871___yhe 917 TT----------CTGGAAG-----------AAGCGGGCCGCCGCCTTGAT 945
BSNT_01676___ 948 -AAGTG-TCTTAAAACGGTTGCGTCTTGAGGAAATCGTCAAGGAGCAGGT 995
|||.| || ||||.|.||...||.|||.|||||||||||||.|||||
BL02871___yhe 946 CAAGCGCTC---AAACAGCTGGAACTCGAGCAAATCGTCAAGGAACAGGT 992
BSNT_01676___ 996 GGATCAGTTCCCGGTGGAGCGTCTTGAAGAAATGGTGCTGTCCATTTCAA 1045
|||..|.|||||.||.||.|||||||||||||||||||||||||||||.|
BL02871___yhe 993 GGACAACTTCCCCGTTGAACGTCTTGAAGAAATGGTGCTGTCCATTTCCA 1042
BSNT_01676___ 1046 AAAAAGAATTTAAAATGATTACCTATTTGGGGGGCCTTCTCGGCGGAATT 1095
|....||.|||||.|||||.||.|||||.||.|||||.||.||||||||.
BL02871___yhe 1043 AGCGGGAGTTTAAGATGATCACGTATTTAGGCGGCCTGCTTGGCGGAATC 1092
BSNT_01676___ 1096 ATAGGCGCGATTCAAGCATTGTTTGTCATCCTTTTTTAA----- 1134
||.||.|||.|.|||||..|.|||||.| ||||.|
BL02871___yhe 1093 ATCGGAGCGGTGCAAGCCATCTTTGTGA-----TTTTGATCTGA 1131
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.