Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01677 and BL02870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01677___yheA.1.5803.seq
# -bsequence dna-align/BL02870___yheA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01677___yheA-BL02870___yheA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01677___yheA-BL02870___yheA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01677___yheA
# 2: BL02870___yheA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity: 263/356 (73.9%)
# Similarity: 263/356 (73.9%)
# Gaps: 4/356 ( 1.1%)
# Score: 938.0
#
#
#=======================================
BSNT_01677___ 1 ATGGCTGTTAATTTTTATGATGTAGCGTATGATCTGGAAAATGCATTACG 50
|||.|.||.|||||..||||....||.|||||..|||||.|.|||||.||
BL02870___yhe 1 ATGACGGTCAATTTACATGACTCGGCTTATGACTTGGAACAAGCATTGCG 50
BSNT_01677___ 51 TGGGAGCGAAGAGTTCACCCGTTTAAAAAACCTTTACGACGAAGTTAACG 100
|...||||||||.|...||||.||.|||||.|||||.||.||.||.||.|
BL02870___yhe 51 TCAAAGCGAAGAATATTCCCGATTGAAAAATCTTTATGATGAGGTGAATG 100
BSNT_01677___ 101 CAGATGAATCAGCGAAGCGCATGTTCGAAAACTTCCGTGATGTACAGCTT 150
..||...|||.||.||....|||||.||.|||||.||.|||.|.||..|.
BL02870___yhe 101 GCGACCCATCTGCTAAAAAGATGTTTGATAACTTTCGCGATATTCAATTG 150
BSNT_01677___ 151 AGACTCCAGCAAAAACAAATGGCAGGAGAAGAGATTACACAAGAAGAAGT 200
|..||.|||||||||||.|||...||.|||||.||.||.||.|||||.||
BL02870___yhe 151 AACCTTCAGCAAAAACAGATGAACGGCGAAGACATCACCCAGGAAGAGGT 200
BSNT_01677___ 201 GACG--CAGGCTCAAAAAACAGTTGCGCTTGTACAGCAGCACGAAAAAAT 248
|| ||.||.||||||.|.||.|||||.||.||||||||.||.|||||
BL02870___yhe 201 --CGAACAAGCGCAAAAATCCGTGGCGCTCGTCCAGCAGCATGAGAAAAT 248
BSNT_01677___ 249 TTCTCAGCTGATGGAAGCGGAGCAGCGCATGAGCATGCTGATTGGTGAAT 298
.||.||||||||||||||.||.|||||.||||||||||||||||.|||.|
BL02870___yhe 249 CTCGCAGCTGATGGAAGCAGAACAGCGGATGAGCATGCTGATTGCTGATT 298
BSNT_01677___ 299 TGAACAAAATCATTATGAAGCCTTTAGAAGAGCTTTACGGCAGTGTTGAA 348
|.|||||||||||||||||||||||.||||||||||||||.|.|...||.
BL02870___yhe 299 TAAACAAAATCATTATGAAGCCTTTGGAAGAGCTTTACGGAAATCCGGAG 348
BSNT_01677___ 349 GGCTAA 354
.|||.|
BL02870___yhe 349 AGCTGA 354
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