Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01690 and BL02865

See Amino acid alignment / Visit BSNT_01690 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence dna-align/BSNT_01690___yhaP.1.5803.seq
#    -bsequence dna-align/BL02865___yhaP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01690___yhaP-BL02865___yhaP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01690___yhaP-BL02865___yhaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01690___yhaP
# 2: BL02865___yhaP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1339
# Identity:     893/1339 (66.7%)
# Similarity:   893/1339 (66.7%)
# Gaps:         149/1339 (11.1%)
# Score: 2757.5
# 
#
#=======================================

BSNT_01690___      1 ATGAATAAATTTTGGATCATGCTTTCTCATACATACAAAAATAAGATTAT     50
                     ||||||||.||||||||..|.||||.|||||||||.|..|..|||.|.|.
BL02865___yha      1 ATGAATAAGTTTTGGATTGTTCTTTTTCATACATATATCAGCAAGCTGAA     50

BSNT_01690___     51 GGCAAAATCCTTTATTATTTCGACTGTCATCACG-GTGCTGCTTGTTTTA     99
                     ..|.||.||.||.||.|||||.||.|.||||||| .||| ||||||..|.
BL02865___yha     51 AACGAAGTCGTTCATCATTTCAACGGCCATCACGCTTGC-GCTTGTCGTG     99

BSNT_01690___    100 GTTGTAACGAATCTGGAGTCGATCATTTCTTTGTTTCAAGGTGACGA-TG    148
                     .|.||.||.|||.|||..|||||.|||||..||||      |||||| .|
BL02865___yha    100 CTCGTCACAAATTTGGGATCGATTATTTCCATGTT------TGACGACGG    143

BSNT_01690___    149 CGAA-----AGAAAAAATCGCCGTTGTTGATGAAACAAACGAATTATATC    193
                     ||.|     .||.||.|||||.||..|||||....||||..|..|.||  
BL02865___yha    144 CGGAGAGGGTGACAAGATCGCTGTCATTGATCGCTCAAATCAGCTGTA--    191

BSNT_01690___    194 CG----GTTTTTTCTAAGCAGCTGAAAGCGGTGGATACTGACG--GCGAT    237
                     ||    |  |||.|..|||||.|||||||..|.||||||||.|  |||  
BL02865___yha    192 CGACACG--TTTGCCCAGCAGGTGAAAGCACTCGATACTGATGAAGCG--    237

BSNT_01690___    238 CTTGATGT----GAAGCTG-TCGAAGCAATCGGAGGATGAG-GTCACAAA    281
                     ||.||.||    .||||.| |  ||||   ||||..|.||| .|.|.|||
BL02865___yha    238 CTGGAGGTCCAAAAAGCGGAT--AAGC---CGGAAAAAGAGCTTGAAAAA    282

BSNT_01690___    282 GCAAGTCAAAGATGAATCACTCGATGGCATGCTCATCATCAAACGAGATG    331
                     | |.||||.|||.|||...|||||.|||||..|.|||.|..|..|||||.
BL02865___yha    283 G-ACGTCAGAGACGAAAAGCTCGAGGGCATTTTAATCCTGGAGAGAGATA    331

BSNT_01690___    332 AAAAAGGGACCATTTC----AGGAACATATAAAGCGTTAACGATTTCTGA    377
                     ||||||||    .|.|    ||||||.|||||||||.|  ||||.|| |.
BL02865___yha    332 AAAAAGGG----GTGCTGAAAGGAACGTATAAAGCGCT--CGATATC-GC    374

BSNT_01690___    378 TGAAAGCAC----GTATCAAACGCTGCAGCAGGCGCTGACGCAAACCAAA    423
                     |||...|||    ||.|| .|||.|..|.||||||||..|||||.|.||.
BL02865___yha    375 TGATTCCACAGCTGTCTC-CACGATTGAACAGGCGCTCTCGCAAGCAAAG    423

BSNT_01690___    424 ACAGCTGTCGGAACAGCGGAGCTCGGCGTGTCGCAGGAAACGATTAG---    470
                     |..||.||.|||||.||.||..|...|||..|.|||||||.|.|.||   
BL02865___yha    424 ATCGCCGTTGGAACGGCTGAATTGAACGTACCTCAGGAAAAGCTGAGTGA    473

BSNT_01690___    471 -CAGCCTTTATGCGCCCGTTACTGTGGGGCAGAAG----GCGCTGAAAGA    515
                      |.|  ||||  |.||.||.|..||    ||..||    ||..|||||||
BL02865___yha    474 ACTG--TTTA--CACCGGTAAAAGT----CAACAGTGTTGCCTTGAAAGA    515

BSNT_01690___    516 AGGGGCAAAGTCTGAGGAAGAGCTT-----GGCCAGACGGTAGGGCTTGT    560
                     |||.||.||..|.||||||||||||     |||  |||   |||||||||
BL02865___yha    516 AGGCGCGAAAACCGAGGAAGAGCTTCAAAAGGC--GAC---AGGGCTTGT    560

BSNT_01690___    561 TTACATTATGCTGTTCGTCATTTATTTTTCGGTGATTATGTATGC--CAG    608
                     .||..||.|||||||.|||||.||||||||.||..|.|||||.||  || 
BL02865___yha    561 GTATGTTGTGCTGTTTGTCATCTATTTTTCCGTTTTGATGTACGCTTCA-    609

BSNT_01690___    609 CATGATTGCGATGGAGGTCGCTACAGAAAAATCTTCGCGAGTTATGGAAA    658
                      ||||||||||..||.||.||.||.||.||.|||||.||.||.|||||||
BL02865___yha    610 -ATGATTGCGACAGAAGTAGCGACGGAGAAGTCTTCCCGCGTAATGGAAA    658

BSNT_01690___    659 TCCTGATCTCAAGTATGCCGCCGATCCAGCAAATGTTTGCAAAGCTGCTT    708
                     |..|.||.||.|||.|||||||..|||||||||||||.||.||.|||.|.
BL02865___yha    659 TTTTAATTTCCAGTGTGCCGCCTGTCCAGCAAATGTTCGCCAAACTGTTC    708

BSNT_01690___    709 GG--------TATCGGGCTTGTCGGGATCACACAGCTTGC------TATT    744
                     ||        |||..|||.||        |||||||||||      ..||
BL02865___yha    709 GGCGTTGCCCTATTAGGCCTG--------ACACAGCTTGCCGCGCTCCTT    750

BSNT_01690___    745 ATTATAGGAGCCGGCTCTCTGTCGCTTAAGCTGAACCAAAAGAGCGAAAC    794
                     .||      |||||||.||||||||||.||...|.|||..|.||||.|..
BL02865___yha    751 CTT------GCCGGCTATCTGTCGCTTCAGTCCAGCCAGGAAAGCGGAGG    794

BSNT_01690___    795 GGCTTCATCTGTCGGC--------GGATTCCTTAATCTGACCGACGTA--    834
                     ||.|.|..|||  .||        |||||..||.||.|..|||.||||  
BL02865___yha    795 GGATGCGGCTG--AGCTGGTTAAAGGATTTTTTGATGTTTCCGGCGTACC    842

BSNT_01690___    835 -TCTGCAACCACTGTCATCTATGCTGTCATTTTCTTTTTGCTCGGATACT    883
                      .|||||||...||   |.||.||.|||||||||||..|||||||.||||
BL02865___yha    843 TACTGCAACGCTTG---TGTACGCGGTCATTTTCTTGATGCTCGGCTACT    889

BSNT_01690___    884 TTTTGTACGCGACACTTGCCGCGTTTCTCGGCAGTGTCGTCAGCAGAATA    933
                     |.||.|||||.||.|||||.||.||||||||.||.|||||||||.|.||.
BL02865___yha    890 TCTTATACGCAACTCTTGCGGCATTTCTCGGAAGCGTCGTCAGCCGGATT    939

BSNT_01690___    934 GAGGACGTGCAGCAAACGATCACGCCGATGACGCTTTTGGTTGTCGCCGG    983
                     ||.||.||.|||||.|.|||..|||||||||..||.|||||.||.|||||
BL02865___yha    940 GAAGATGTTCAGCAGATGATTTCGCCGATGATCCTGTTGGTCGTTGCCGG    989

BSNT_01690___    984 TTTTATGATCGCGATGTTCGGTTTGAATGCGCCTGACGCAGGA--TTTAT   1031
                     .||.|||||.||.||||||||..|||||||.||.||..|  ||  |||||
BL02865___yha    990 ATTCATGATTGCCATGTTCGGACTGAATGCTCCGGATTC--GACGTTTAT   1037

BSNT_01690___   1032 TACGGTAACTTCGTTTATTCCGTTCTTTACGCCAATGATTATGTTCCTGC   1081
                     |||..|.|||||.||.||||||||.|||.||||.|||||.||||||||..
BL02865___yha   1038 TACCATCACTTCATTCATTCCGTTTTTTGCGCCGATGATCATGTTCCTCA   1087

BSNT_01690___   1082 GCGTCGGCATGCTTGATATTCCGTTCTGGCAGGCGGCTGTCGGAATCGGA   1131
                     |.||||||.||||||||||||||||.|||.|.||||||.||||.|||||.
BL02865___yha   1088 GAGTCGGCGTGCTTGATATTCCGTTTTGGGAAGCGGCTCTCGGCATCGGC   1137

BSNT_01690___   1132 ATCA-CACTGCTCACCATTGTCATACTGGCCGTTATCGGCGCCAGAATTT   1180
                     |||| |.|| |||||.|||||.||.||.|||||.|||||.||.||..|.|
BL02865___yha   1138 ATCACCGCT-CTCACGATTGTGATTCTCGCCGTCATCGGGGCGAGGGTGT   1186

BSNT_01690___   1181 ATAAAGGCGGTGTATTAATTTACGGCAATTCAAGC----GCG--TTCAAA   1224
                     ||||||||||.||..|.||.|||      .|||||    |||  ||.|||
BL02865___yha   1187 ATAAAGGCGGCGTGCTCATGTAC------ACAAGCGGCGGCGGATTGAAA   1230

BSNT_01690___   1225 GCGATCAAACAAGCGCTACGTTTAGCGAAAAACTGA---   1260
                     ...||||||||.|||||.|||.|..|.|||.|..||   
BL02865___yha   1231 AATATCAAACAGGCGCTTCGTCTGTCAAAAGATCGATAA   1269


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