Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01694 and BL02861
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01694___yhaM.1.5803.seq
# -bsequence dna-align/BL02861___yhaM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01694___yhaM-BL02861___yhaM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01694___yhaM-BL02861___yhaM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01694___yhaM
# 2: BL02861___yhaM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity: 732/948 (77.2%)
# Similarity: 732/948 (77.2%)
# Gaps: 60/948 ( 6.3%)
# Score: 2984.0
#
#
#=======================================
BSNT_01694___ 0 -------------------------------------------------- 0
BL02861___yha 1 ATGGCAAAAGGTATCATGCTGCACGAAGTTGGCGAGCAGGTGGATTTGTA 50
BSNT_01694___ 1 -TTG---ATTAAATCCTCGACGAAAGGGATTGCAAGCAATGGAAAACCGT 46
||| ||||||||.||.||||||||.||.||||||||.||.|||||||
BL02861___yha 51 CTTGCTCATTAAATCGTCAACGAAAGGAATCGCAAGCAACGGGAAACCGT 100
BSNT_01694___ 47 TTCTGACGCTGATGCTGCAAGACCAGTCAGGCGATATTGAAGCGAAGCTG 96
||.|.||||||||||||||.||.|||||.||.|||||.|||||.||||||
BL02861___yha 101 TTTTAACGCTGATGCTGCAGGATCAGTCCGGAGATATAGAAGCAAAGCTG 150
BSNT_01694___ 97 TGGGATGCCAAGCA-AAGTGATGAAGTGACCTATGCGCCGCAGACGATTG 145
|||||.|||||||| .|| ||.|||||||||||.|..|||||||||||.|
BL02861___yha 151 TGGGACGCCAAGCAGCAG-GACGAAGTGACCTACGGCCCGCAGACGATCG 199
BSNT_01694___ 146 TCAAGGTCGTCGGCGATGTTCATCATTATCGCGGGCGCACCCAGCTGAAG 195
|.||.||.||||||||..||||||||||.||||||||.|.||||||||||
BL02861___yha 200 TGAAAGTGGTCGGCGACATTCATCATTACCGCGGGCGGAACCAGCTGAAG 249
BSNT_01694___ 196 CTAAGAAATATCAGACCGGTAAGCGAGCAAGAAAACGTCAATATAGATGA 245
||.|||||.||||||||.|.|.|||||.|.|||||||||||.||.|||||
BL02861___yha 250 CTGAGAAACATCAGACCTGCAGGCGAGAACGAAAACGTCAAAATCGATGA 299
BSNT_01694___ 246 TTTTTTAGAAACCGCGCCGATTCCGAAAAATGAAATGATGGATACCATCA 295
.|||.|.|||||.||.||||||||.|||||.||||||||||||.|..|||
BL02861___yha 300 CTTTCTTGAAACTGCACCGATTCCCAAAAACGAAATGATGGATGCGGTCA 349
BSNT_01694___ 296 CTCAATATATATTTGAAATGAAAAATCCGAATATCCAGCGAATCACAAGG 345
||||||||||.||||||||||||||.||||||||.|||||||||||||||
BL02861___yha 350 CTCAATATATTTTTGAAATGAAAAACCCGAATATACAGCGAATCACAAGG 399
BSNT_01694___ 346 TTTTTGGTTAAAAAACACG--AAGCTGAGTTTATGGATTATCCGGCGGCT 393
..|.|.||.||||||.||| ||| ||.||.||.|||||||||||.||.
BL02861___yha 400 CATCTTGTCAAAAAATACGGCAAG--GAATTCATTGATTATCCGGCTGCG 447
BSNT_01694___ 394 ACGAAAAACCACCATGAGTTTGTCTCAGGTTTGGCGTATCATGTTGTCTC 443
||||||||.|||||.|||||.||.||||||.|.|||||.||||||||.||
BL02861___yha 448 ACGAAAAATCACCACGAGTTCGTGTCAGGTCTCGCGTACCATGTTGTTTC 497
BSNT_01694___ 444 TATGCTGAACCTGGCGAAAGCAATAGCAGATTTATATCCTTCTCTTGATC 493
.||||||||||||||.|||.|..|.|||||..|.|||||.||.||.||||
BL02861___yha 498 CATGCTGAACCTGGCCAAATCGGTCGCAGACCTGTATCCGTCGCTCGATC 547
BSNT_01694___ 494 GTGATCTGCTTTACGCCGGTGTTATCCTGCATGATCTTGGAAAAGTGAAG 543
|.||.||..|.|||||.||.||.||.||||||||.|||||||||||.||.
BL02861___yha 548 GCGACCTTTTATACGCAGGCGTCATTCTGCATGACCTTGGAAAAGTAAAA 597
BSNT_01694___ 544 GAGCTGTCCGGCCCTGTTTCCACTTCATATACGGTTGAAGGCAATTTGCT 593
||.||.||||||||.||.|||||..|||||||.||.|||||.||..||||
BL02861___yha 598 GAACTATCCGGCCCGGTGTCCACGACATATACTGTCGAAGGGAACCTGCT 647
BSNT_01694___ 594 CGGCCATATTTCCATCATGGTGACAGAGCTTTCAAAAGCGGCTGAGGAGC 643
.||.||.||.||.||.|||||||||||..||.|||||||.||.||.||||
BL02861___yha 648 GGGGCACATATCGATTATGGTGACAGAAATTGCAAAAGCCGCCGAAGAGC 697
BSNT_01694___ 644 TTCAAATCGATTCTGAAGAGGTGTTAATTCTTCAGCATTTGATTTTGAGT 693
|||||||.|||||.|||||.|||.|.||||||||||||||||||||.||.
BL02861___yha 698 TTCAAATTGATTCAGAAGAAGTGCTGATTCTTCAGCATTTGATTTTAAGC 747
BSNT_01694___ 694 CACCACGGCAAAGCAGAATGGGGCAGCCCAAAACCGCCGATGGTGAAAGA 743
||.|||||||||.|.|||||||||||.||.||.|||||||||||.||.||
BL02861___yha 748 CATCACGGCAAACCCGAATGGGGCAGTCCGAAGCCGCCGATGGTCAAGGA 797
BSNT_01694___ 744 AGCGGAAATTCTTCACTATATAGACAATCTGGATGCAAAAATGAATATGA 793
|||||||||||||||||||||.|||||.||.||.||.||.||.|||||||
BL02861___yha 798 AGCGGAAATTCTTCACTATATCGACAACCTTGACGCGAAGATCAATATGA 847
BSNT_01694___ 794 TGGACAGAGCGCTTGAACGCGTGAAGCCGGGCGAGTATACTGAACGTGTA 843
|||||||||||||.|||||.||.||||||||.||.|||||.|||||.||.
BL02861___yha 848 TGGACAGAGCGCTCGAACGGGTTAAGCCGGGAGAATATACCGAACGGGTC 897
BSNT_01694___ 844 TTTGCACTGGAAAACCGTTCCTTTTATAAACCGACATTTCATAAATAA 891
||.|||.||||.|||||||||||||||||.||....|||||.||||||
BL02861___yha 898 TTCGCATTGGATAACCGTTCCTTTTATAAGCCCGTTTTTCACAAATAA 945
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