Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01695 and BL02860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_01695___yhaL.1.5803.seq
# -bsequence dna-align/BL02860___yhaL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01695___yhaL-BL02860___yhaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01695___yhaL-BL02860___yhaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01695___yhaL
# 2: BL02860___yhaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity: 165/243 (67.9%)
# Similarity: 165/243 (67.9%)
# Gaps: 39/243 (16.0%)
# Score: 592.5
#
#
#=======================================
BSNT_01695___ 1 GTGTTATTTTTTCCATGGTGGGTGTATCTTTGTATTGTAGGCATCATTTT 50
|||.|..|.|||||.|||||||||||.|||||.||.||.|||||.|||||
BL02860___yha 1 GTGCTGCTGTTTCCGTGGTGGGTGTACCTTTGCATCGTCGGCATTATTTT 50
BSNT_01695___ 51 CAGCGCATATAAACTTGTGGCGGCAGCCAAAGAGGAAGAAAAAGTAGACC 100
||||||.|||||.||..||.||.|.||.||.||.||.|||||..|.||||
BL02860___yha 51 CAGCGCCTATAAGCTGATGACGACGGCAAAGGAAGAGGAAAAGATTGACC 100
BSNT_01695___ 101 AGGCTTTTATTGAAAAAGAAGGACAGATTTATATGGAGAGGATGGAAAAG 150
||||||||||.|||||||||||.|..||||||||.||..||||||||||
BL02860___yha 101 AGGCTTTTATCGAAAAAGAAGGCCGCATTTATATCGAACGGATGGAAAA- 149
BSNT_01695___ 151 GAGCGAGAACGC----CGCA------GTTCTC---------------AGC 175
.||.||.|| |||| ||.|.| |.|
BL02860___yha 150 ---AGAAAAAGCAAAGCGCATGAAGCGTACACTGGATGAAGATCAAGAAC 196
BSNT_01695___ 176 AGCATGAAGAAGAAAATC-----AAAACCATTCCATCGCATAA 213
||||||| |||||| |.|.||||||||||||||||
BL02860___yha 197 AGCATGA-----AAAATCGGCTGACAGCCATTCCATCGCATAA 234
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