Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01615 and BL02858
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_01615___yhdE.1.5803.seq
# -bsequence dna-align/BL02858___yhdE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01615___yhdE-BL02858___yhdE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01615___yhdE-BL02858___yhdE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01615___yhdE
# 2: BL02858___yhdE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 302/468 (64.5%)
# Similarity: 302/468 (64.5%)
# Gaps: 63/468 (13.5%)
# Score: 962.5
#
#
#=======================================
BSNT_01615___ 1 ATGAAGTTAACCAATTATACAGATTATTCATTAAGAGTGTTGATTTTTCT 50
|||||.|||||.||||||||.|||||.|||||.||.||..||||||||||
BL02858___yhd 1 ATGAAATTAACAAATTATACGGATTACTCATTGAGGGTACTGATTTTTCT 50
BSNT_01615___ 51 GGCTGCAGAGCGTCCCGGAGAACTTTCA------------AATATAAAAC 88
|||..|| .|.||| ||| |||||.|||.
BL02858___yhd 51 --------AGCAACC--AAAAAC--TCAAACGAGCTTGTCAATATTAAAG 88
BSNT_01615___ 89 AGATTGCCGAAACGTATTCTATTTCAAAAAATCATCTCATGAAAGTCATA 138
|.||.|||||..|.|||||.|||||||||||.||.||.|||||.||.||.
BL02858___yhd 89 ACATCGCCGATTCTTATTCCATTTCAAAAAACCACCTTATGAAGGTGATT 138
BSNT_01615___ 139 TACAGGCTCGGCCAGCTCGGCTACGTAGAAACGATACGCGGACGGGGCGG 188
|||..|||.|||.||||.||||||||.||||||||.|||||.||...|||
BL02858___yhd 139 TACGAGCTTGGCAAGCTTGGCTACGTTGAAACGATCCGCGGCCGCAACGG 188
BSNT_01615___ 189 CGGCATACGATTAGGCATGGAA-----CCTGAAGACATCAACATCGGTGA 233
||| ||||.|.|..|||| ||||||...||.||.||||||||
BL02858___yhd 189 CGG-----GATTCGTCTCGGAAAAGCGCCTGAACTGATTAATATCGGTGA 233
BSNT_01615___ 234 GGTTGTCAGAAAAACGGAGGACGATTTTAATATTGTTGAATGTTTTGATG 283
.||..|.|||.|.||.||.||.||||||||..||||.||.||||||.|.|
BL02858___yhd 234 AGTCATAAGACATACAGAAGATGATTTTAACCTTGTCGAGTGTTTTAACG 283
BSNT_01615___ 284 CGA-ATAAGAATCTCTGTGTTATTTCCCCGGTTTGCGGCTTAAAACATGT 332
|| |.||.||.|..|||.|..||||.|||.|.|||||.|||||.|||||
BL02858___yhd 284 -GAGAAAAAAACCATTGTATACTTTCTCCGATCTGCGGATTAAAGCATGT 332
BSNT_01615___ 333 GCTGAATGAAGCGCTTTTGGCCTACCTCGCAGTTTTAGACAAATACACAC 382
..|.||..||||.||||..|||||..|.|..||.||.|||.|||||||.|
BL02858___yhd 333 TTTAAACAAAGCCCTTTCCGCCTATTTGGACGTATTGGACCAATACACTC 382
BSNT_01615___ 383 TGCGCGACCTCGTCAAAAACAAAGAAGATATCATGA------AGCTTTTA 426
||| ||||...|||||||| |.|.|.||
BL02858___yhd 383 TGC------------------AAGATATTATCATGAATCAGGACCATATA 414
BSNT_01615___ 427 --AAAATGAAGGAATAG- 441
.||||.|..||.|.|
BL02858___yhd 415 CGTAAATTATTGAGTTGA 432
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