Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01635 and BL02853

See Amino acid alignment / Visit BSNT_01635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence dna-align/BSNT_01635___yhdK.1.5803.seq
#    -bsequence dna-align/BL02853___yhdK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01635___yhdK-BL02853___yhdK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01635___yhdK-BL02853___yhdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01635___yhdK
# 2: BL02853___yhdK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     220/298 (73.8%)
# Similarity:   220/298 (73.8%)
# Gaps:          14/298 ( 4.7%)
# Score: 780.0
# 
#
#=======================================

BSNT_01635___      1 ATGGAACTGGTAAGAATTTTTAAAGAACACAATGTATTCGGCTGGATCTC     50
                     |||||||||||||||||.|||||.||.|||||.|||||.||.|||.|.||
BL02853___yhd      1 ATGGAACTGGTAAGAATCTTTAAGGAGCACAACGTATTTGGATGGGTGTC     50

BSNT_01635___     51 TGTCGGGACAGCGGTTCTGTCCCTGCTGTTGCTGAATTTGGCCATTATCA    100
                     ||||||.||.||..|||||||||||.|..|..|.||.|||||||||.|.|
BL02853___yhd     51 TGTCGGCACGGCCATTCTGTCCCTGTTCGTCTTAAACTTGGCCATTTTAA    100

BSNT_01635___    101 GCAACGTCACGTTT---TATTCCTATCAAATGCTTCCGTTCGCCATGGCT    147
                     |   ||.||||.||   |||||.|||.|.||||||||.||.||.|||||.
BL02853___yhd    101 G---CGACACGATTGCATATTCGTATAAGATGCTTCCTTTTGCGATGGCC    147

BSNT_01635___    148 GCCGTTCCGTTCGGCGTTGTTGAACTCTTCATCAAGAGAGGGCGCACAGG    197
                     |||||||||.||||..||.|.||.||.|||||.||.|.|||.||.||.||
BL02853___yhd    148 GCCGTTCCGCTCGGAATTATCGAGCTGTTCATAAAAAAAGGACGGACCGG    197

BSNT_01635___    198 CCCCGGCCTGCTCGGCGTCATCCTTAATCTCTTTGTGATTAT--TTGTGT    245
                     .|.|||..|.|||||||||.||||.||   |.||.|.|||.|  || ||.
BL02853___yhd    198 TCTCGGATTTCTCGGCGTCGTCCTGAA---CATTTTCATTCTCGTT-TGC    243

BSNT_01635___    246 GTAT--ACCATTGTATCTGTAGATACGAATTTACAGTTTGGCTTTTAA    291
                     ||||  |||||.||.||..|.|||||||||.|.|||.|.|||||||||
BL02853___yhd    244 GTATGGACCATCGTCTCCATCGATACGAATCTGCAGCTCGGCTTTTAA    291


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