Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01662 and BL02836
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:08
# Commandline: needle
# -asequence dna-align/BSNT_01662___nhaX.1.5803.seq
# -bsequence dna-align/BL02836___nhaX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01662___nhaX-BL02836___nhaX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01662___nhaX-BL02836___nhaX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01662___nhaX
# 2: BL02836___nhaX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity: 336/553 (60.8%)
# Similarity: 336/553 (60.8%)
# Gaps: 95/553 (17.2%)
# Score: 883.0
#
#
#=======================================
BSNT_01662___ 1 GTGAGAAGGATGTTCCATGCTGACCGTATCATTGTTGCGTTTGACGGAAG 50
.||||..|.||||||||.|||||.||.|||||||||||||.
BL02836___nha 1 ---------TTGTTTAAAGCTGACCGGATCATAGTCGCGTTTGACGGAAA 41
BSNT_01662___ 51 TGAAAATAGTAAGAAAGCGCTTCAG-ACAGCCATTGATCTTGCTAAAACC 99
.||..|.||.||.||||||| |.|| |.|||.||.||.||..|.||||..
BL02836___nha 42 AGAGGAAAGCAAAAAAGCGC-TGAGAAAAGCGATCGACCTGTCGAAAAGG 90
BSNT_01662___ 100 GTAAATGCCGCT----ATT-ACCGTCGCCCAT-TCACATGA---TATGAA 140
.| |.||| ||| |||||||||||| || ||||| .|.|.|
BL02836___nha 91 CT-----CGGCTCACAATTGACCGTCGCCCATGTC-CATGAACCGAGGCA 134
BSNT_01662___ 141 A--GACAATCAGACCGTCATCGACCCGCC--CAGACCCGCAGCTGAGGCA 186
| ||.|| |||| |.|..|| ||| .|||||.||.||.|..||
BL02836___nha 135 AGTGAGAA-CAGA--GGCTGCG----GCCGAAAGACCAGCTGCCGGAGC- 176
BSNT_01662___ 187 AGCTATA-----TCAGCGG-----AGGCATGACAAGTGTTCCTGAT---C 223
||.||| .|||||| .|||...|| .||.||| |
BL02836___nha 177 -GCCATACCTTTACAGCGGCTTCCCGGCCGCAC------CCCGGATCCCC 219
BSNT_01662___ 224 CGCTGATATCGGATGTAACATCACC--TGAGCCAATGATCTATGAAGACC 271
||| ||| ||.| ||.|..|| |||.||.||||||||.||.|||.
BL02836___nha 220 CGC-GAT-TCAG-----ACTTGGCCGGTGAACCCATGATCTACGAGGACA 262
BSNT_01662___ 272 GTACGGAAGAAGTCATCGCCGAAGCAAGAATGATGCTGAATGAACAGCAG 321
|..|||||||||..||.||.|.|||.|.|||.||..|||..|||.|.|||
BL02836___nha 263 GCGCGGAAGAAGCGATTGCGGCAGCGAAAATCATATTGAGCGAAAACCAG 312
BSNT_01662___ 322 GCAGATGGAGATATCGATATATTAGAAGGCGATCCGGCTGAATCAATTAT 371
...||.|..||.|||||..|..|.|||||.||..||||..|..||.||.|
BL02836___nha 313 TACGACGCGGAAATCGAGGTGCTGGAAGGAGACACGGCCAACGCAGTTCT 362
BSNT_01662___ 372 CGAGCATGC---AAAC-----CGCATTTCTGCCGATATGA--TCGTAACC 411
..||||||| |||| ||| ||| ||||.|.|
BL02836___nha 363 GCAGCATGCGGAAAACATCGGCGC-------------TGACCTCGTCATC 399
BSNT_01662___ 412 ----GGAAGCAGAGACCAAAACAGGCTGAAAAAGCTAATATTCGGAAGTG 457
|.|.|| |.|||||.|||.|.|||||||||||..|.|||||.||.|
BL02836___nha 400 ACAGGTACGC-GCGACCAGAACCGCCTGAAAAAGCTCCTGTTCGGCAGCG 448
BSNT_01662___ 458 TAAGTGAAAAGCTTTCAGCGAAATCGGATATACCCGTCCTGATTGTAAAG 507
|.||.||.|||.|.||..|.||||||||.||.|||||.||||||||.||.
BL02836___nha 449 TCAGCGACAAGATATCGACAAAATCGGAGATCCCCGTGCTGATTGTGAAA 498
BSNT_01662___ 508 TGA 510
|.|
BL02836___nha 499 TAA 501
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