Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01668 and BL02834
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01668___sspB.1.5803.seq
# -bsequence dna-align/BL02834.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01668___sspB-BL02834.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01668___sspB-BL02834.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01668___sspB
# 2: BL02834
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 165/216 (76.4%)
# Similarity: 165/216 (76.4%)
# Gaps: 24/216 (11.1%)
# Score: 660.5
#
#
#=======================================
BSNT_01668___ 1 ATGGCTAACCAAAACTCTTCAAATGACTTGCTAGTTCCTGGCGCAGCTCA 50
||||||||.|||||.|||||||||.|..||||.||.||.||.|||||.||
BL02834 1 ATGGCTAATCAAAATTCTTCAAATCAACTGCTTGTCCCAGGAGCAGCGCA 50
BSNT_01668___ 51 GGCTATCGATCAAATGAAACTTGAAATCGCTTCTGAATTCGGCGTTAACC 100
.||.|||||.|||||||||.|.||||||||||||||.||||||||.||||
BL02834 51 AGCGATCGAACAAATGAAATTCGAAATCGCTTCTGAGTTCGGCGTAAACC 100
BSNT_01668___ 101 TTGGAGCGGACACAACTTCTCGCGCTAACGGTTCTGTCGGAGGAGAAATC 150
||||.||.|||||.|||||.||.||.||||||||||||||.||||||||.
BL02834 101 TTGGCGCTGACACGACTTCCCGTGCAAACGGTTCTGTCGGCGGAGAAATT 150
BSNT_01668___ 151 ACAAAACGTTTAGTATCTTTC----GCTCAGCAGCA--AATGGGCGGCAG 194
||||||||||||| |||| ||||| |||| .||||||||
BL02834 151 ACAAAACGTTTAG----TTTCCCAAGCTCA--AGCATCTATGGGCGG--- 191
BSNT_01668___ 195 AGTTCAATAA------ 204
||||.||
BL02834 192 ---TCAACAATTTTAA 204
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