Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00739 and BL02825
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence dna-align/BSNT_00739___ydzA.1.5803.seq
# -bsequence dna-align/BL02825___ydzA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00739___ydzA-BL02825___ydzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00739___ydzA-BL02825___ydzA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00739___ydzA
# 2: BL02825___ydzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity: 233/298 (78.2%)
# Similarity: 233/298 (78.2%)
# Gaps: 11/298 ( 3.7%)
# Score: 877.0
#
#
#=======================================
BSNT_00739___ 1 ATGCTGCAAACGCCGATCGGAAGACTTCGCACGATGGGTTTTATTGAAGG 50
|||||||||||||||||.||..|.|||||...||||||||||||||||||
BL02825___ydz 1 ATGCTGCAAACGCCGATTGGCCGCCTTCGGTTGATGGGTTTTATTGAAGG 50
BSNT_00739___ 51 AATGTCACTCTTAATCCTGTTGTTCATCGCTATGCCGCTTAAATATTGGG 100
.|||||.||.|||||||||.||||||||||.|||||||||||||||||||
BL02825___ydz 51 CATGTCGCTTTTAATCCTGCTGTTCATCGCCATGCCGCTTAAATATTGGG 100
BSNT_00739___ 101 CAGGCCTT--CCGCTTGCGGTGACAATTGTCGGTTCGGTTCACGGCGGGT 148
| |..|| |||.|.||.||.||.||||||||.||||||||||||||.|
BL02825___ydz 101 C--GGATTACCCGATGGCCGTTACGATTGTCGGATCGGTTCACGGCGGAT 148
BSNT_00739___ 149 TGTTCATTTTGTATTTACTTGTCTTGGCTTATGCAACCTTCTCTG-TCAA 197
||||.|||||||||||..||||..||...||||||| |||.|.|| |.|.
BL02825___ydz 149 TGTTTATTTTGTATTTGTTTGTTCTGTTGTATGCAA-CTTTTGTGCTGAG 197
BSNT_00739___ 198 ATGGCCGCTGAAATGGTCAGCTGCCGG-CTTCGTCGCCGCTTTCGTCCCA 246
.|||.|..||||||||.|.|||||||| ||| ||.|||||.||.||.|||
BL02825___ydz 198 GTGGTCTGTGAAATGGCCGGCTGCCGGTCTT-GTGGCCGCATTTGTTCCA 246
BSNT_00739___ 247 TTCGGAAATTTTTTGTACGACCGCGGATTAAGGAAAT---ATAAATAA 291
|||||.|||||..|.||.|||||.|||.|||..|||| ||.|.|||
BL02825___ydz 247 TTCGGCAATTTCCTTTATGACCGGGGACTAAAAAAATATGATCAGTAA 294
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