Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00741 and BL02823

See Amino acid alignment / Visit BSNT_00741 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence dna-align/BSNT_00741___topB.1.5803.seq
#    -bsequence dna-align/BL02823___topB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00741___topB-BL02823___topB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00741___topB-BL02823___topB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00741___topB
# 2: BL02823___topB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2231
# Identity:    1697/2231 (76.1%)
# Similarity:  1697/2231 (76.1%)
# Gaps:          88/2231 ( 3.9%)
# Score: 6337.0
# 
#
#=======================================

BSNT_00741___      1 ------ATGTCAAAAACAGTTGTATTAGCTGAAAAACCTTCAGTCGGCAG     44
                           .||||.|||||||||||.|||||.||||||||||||||||||.|
BL02823___top      1 ATGGACGTGTCTAAAACAGTTGTTTTAGCAGAAAAACCTTCAGTCGGCCG     50

BSNT_00741___     45 GGATTTAGCCCGGGTGCTGAAGTGCCATAAAAAAGGAAACGGTTATCTCG     94
                     .||.||.|||||.|||||||||||.|||||||||||||||||.|||||.|
BL02823___top     51 TGACTTGGCCCGCGTGCTGAAGTGTCATAAAAAAGGAAACGGATATCTTG    100

BSNT_00741___     95 AAGGCGATCAATATATTGTGACCTGGGCTTTAGGCCATTTGGTGACGCTT    144
                     |||||||.|..|||||.|||||.|||||..|.||||||.||||.||..|.
BL02823___top    101 AAGGCGACCGCTATATCGTGACATGGGCGCTCGGCCATCTGGTCACATTG    150

BSNT_00741___    145 GCTGATCCGGAAGGCTACGGAAAAGAATTTCAATCATGGCGCCTAGAGGA    194
                     ||.||.||.|||||.||||||||.||||..||.||.|||||.||.||.||
BL02823___top    151 GCGGACCCTGAAGGATACGGAAAGGAATACCAGTCTTGGCGGCTTGAAGA    200

BSNT_00741___    195 TCTGCCGATTATCCCAGAACCCTTGAAGCTTGTGGTGATAAAAAAAACCG    244
                     .||||||||.|||||.||.||.||.|||||.||.|||||.|||||.||||
BL02823___top    201 CCTGCCGATCATCCCTGAGCCTTTAAAGCTCGTCGTGATCAAAAAGACCG    250

BSNT_00741___    245 GAAAGCAGTTCAATGCAGTCAAATCCCAGCTTACCCGTAAAGACGTCAAT    294
                     ||||.|||||..|.||.||.|||||.|||||.|.|.|.|||||.|||||.
BL02823___top    251 GAAAACAGTTTCAGGCGGTAAAATCGCAGCTGATCAGAAAAGATGTCAAA    300

BSNT_00741___    295 CAGATTGTCATCGCGACTGACGCAGGCCGGGAAGGTGAGCTTGTTGCGCG    344
                     .|.||.|||||.||.||.||.||.|||||||||||.|||||.||.||.||
BL02823___top    301 GACATCGTCATTGCAACCGATGCCGGCCGGGAAGGCGAGCTCGTCGCCCG    350

BSNT_00741___    345 CTGGATCATTGAGAAAGCGAATGTC-CGAAAACCAATCAAGCGGCTGTGG    393
                     |||||||||.||.|||||.||.||| || ||.|||.|.|||||.||||||
BL02823___top    351 CTGGATCATCGAAAAAGCAAAGGTCACG-AAGCCATTGAAGCGTCTGTGG    399

BSNT_00741___    394 ATTTCATCTGTGACGGATAAAGCGATCAAGGAAGGTTTTCAAAAGCT---    440
                     |||||||||||.||.||.|||||||||||.||.||.||| ||||.||   
BL02823___top    400 ATTTCATCTGTTACTGACAAAGCGATCAAAGACGGATTT-AAAAACTTAA    448

BSNT_00741___    441 -GCGCAGCGGCAAAGAATATGAAAACCTTTACCATTCTGCCGTCGCCAGA    489
                      |   |.|||||||||.|.||||||||||||||||||.||.||.||..||
BL02823___top    449 AG---AACGGCAAAGACTTTGAAAACCTTTACCATTCAGCTGTGGCTCGA    495

BSNT_00741___    490 GCGGAAGCGGATTGGATTGTGGGGATCAATGCCACCCGTGCACTTACCAC    539
                     ||.|||||.||||||||.||.||.|||||.||.||..|.||.||.||.||
BL02823___top    496 GCTGAAGCCGATTGGATCGTCGGCATCAACGCGACGAGGGCGCTGACAAC    545

BSNT_00741___    540 AAAATTCAATGCCCAGCTCTCATGCGGGCGTGTGCAGACTCCGACGCTTG    589
                     .||||||||.||||||||.||.||||||||.||.|||||.||||||||.|
BL02823___top    546 GAAATTCAACGCCCAGCTTTCCTGCGGGCGCGTACAGACGCCGACGCTGG    595

BSNT_00741___    590 CCATGATTGCAAAGCGCGAGGCAGACATTCAAG--CGTTTACGCCCGTTC    637
                     |.|||||.||.||..|.||||.|||.||| |||  | ||||..|||||.|
BL02823___top    596 CAATGATCGCCAAAAGAGAGGAAGATATT-AAGAAC-TTTAAACCCGTCC    643

BSNT_00741___    638 CGTATTACGGCATCCGTGCTGTAGTCGACGGCATGACGCTGACGTGGCAG    687
                     |.||||.||||.|.||.||.|..||||||||||||||||||||.||||||
BL02823___top    644 CTTATTTCGGCTTGCGCGCAGCGGTCGACGGCATGACGCTGACATGGCAG    693

BSNT_00741___    688 GATAAGAAA----TCAAAGCAGACGAGAACGTTCA----ATCAAGATGTA    729
                     ||.|| |||    |||   |||||..|.|||||||    |||    |||.
BL02823___top    694 GACAA-AAAGACGTCA---CAGACACGCACGTTCAACGCATC----TGTG    735

BSNT_00741___    730 ACAAGCCGTCTGCT---AAAAAATCTCCAAGGAAAGCAAGCGGTCGTAGC    776
                     ||  |.|| |.|||   |..|...||.|||||.||.|..||.|||.|.|.
BL02823___top    736 AC--GTCG-CAGCTTGCAGGAGCGCTGCAAGGCAAACCGGCCGTCATCGT    782

BSNT_00741___    777 TGAGCTGAAAAAAACAGCGAAAAAAAGCTTTGCGCCTGCGCTTTATGATT    826
                     .||..||||||||||.|||||||||||||||||.||.|..|||||||||.
BL02823___top    783 CGACTTGAAAAAAACGGCGAAAAAAAGCTTTGCTCCCGGACTTTATGATC    832

BSNT_00741___    827 TAACGGAGCTGCAGCGTGACGCCCACAAGCGCTTCGGTTTTTCTGCTAAA    876
                     |.||.|||||||||.|.||||||||.||.||||||||.|||||.||.|||
BL02823___top    833 TGACTGAGCTGCAGAGGGACGCCCATAAACGCTTCGGCTTTTCCGCAAAA    882

BSNT_00741___    877 GAAACGCTTTCTGTCCTGCAGAAGCTATATGAGCAGCATAAGCTCGTCAC    926
                     ||||||||.||.||..||||||||||.|||||||||||.|||||||||||
BL02823___top    883 GAAACGCTGTCCGTTTTGCAGAAGCTCTATGAGCAGCACAAGCTCGTCAC    932

BSNT_00741___    927 ATATCCGCGGACGGACTCTAGATTTTTATCCAGTGACATCATCCCAACGT    976
                     .|||||||||||||||||.||.|||.|.||||.|||||||.||||.|||.
BL02823___top    933 CTATCCGCGGACGGACTCAAGGTTTCTTTCCAATGACATCGTCCCGACGC    982

BSNT_00741___    977 TAAAAGACCGTCTGGAAGGCATGGAAGTAAAACCGTATGCCCAATATGTC   1026
                     |.|||||||||.|||||||||||.|.||.||.||.||||||||..||||.
BL02823___top    983 TGAAAGACCGTTTGGAAGGCATGCAGGTGAAGCCTTATGCCCAGCATGTG   1032

BSNT_00741___   1027 AGCCAAATTAAAAAACGCGGCATTAAATCTCATAAAGGATATGTCAATGA   1076
                     ..||..||....||.||.||..|||||.|..|||||.|.|.||||||.||
BL02823___top   1033 GCCCGGATCCTGAAGCGGGGGGTTAAAGCCAATAAAAGCTTTGTCAACGA   1082

BSNT_00741___   1077 CGCGAAGGTGTCAGACCACCACGCGATTATCCCGACCGAAGAGCCGCTCG   1126
                     .|||||.||.||.||.||||||||||||||.|||||.|||||||||||.|
BL02823___top   1083 TGCGAAAGTATCCGATCACCACGCGATTATTCCGACGGAAGAGCCGCTTG   1132

BSNT_00741___   1127 TTCTCAGC-AGTCTGAGTGATAAAGAACGAAAGCTGTATGACCTGATTGC   1175
                     ..|||.|| .|| |.||.||.||.|||.|||||||.||.||..||||.||
BL02823___top   1133 CGCTCGGCGCGT-TAAGCGAAAAGGAAAGAAAGCTTTACGATTTGATCGC   1181

BSNT_00741___   1176 GAAACGTTTCCTTGCTGTATTAATGCCTGCATTCGAATATGAGGAAACAA   1225
                     |||.||.|||||.|||||.||||||||..|.||.||||||||.|||||||
BL02823___top   1182 GAAGCGCTTCCTCGCTGTTTTAATGCCGCCGTTTGAATATGAAGAAACAA   1231

BSNT_00741___   1226 AGGTCATCGCAGAAATCGGCGGAGAAACCTTTAGGGCGAAAGGCAAAACC   1275
                     |.||..|.||.||||||||||||||||||||||.|||.|||||.|||||.
BL02823___top   1232 AAGTGTTTGCCGAAATCGGCGGAGAAACCTTTACGGCAAAAGGGAAAACA   1281

BSNT_00741___   1276 GTGCAATCGCAAGGGTGGAAAGCCGTTTATGATATGGCGGATGAGGATGA   1325
                     ||.||.||||||||.||||||||.||.||.|||.|.||.||.||.|||||
BL02823___top   1282 GTTCAGTCGCAAGGCTGGAAAGCGGTGTACGATTTCGCAGACGAAGATGA   1331

BSNT_00741___   1326 TGAGCAGGAGGATGACAGAGACCAGACACTTC-----CTGCGCTTCAAAA   1370
                     ||   |.|||||.||.|..||.||.||.||||     || |||    |||
BL02823___top   1332 TG---ACGAGGAAGAAAAGGATCAAACCCTTCCAAAACT-CGC----AAA   1373

BSNT_00741___   1371 AGGCGACACACTTGCCGTCCGCACGTTAACGGAAAC-AAGCGGCCAAACG   1419
                     |||||||||.|||.|||||||..|.||.||.||.|| ||| ||..||||.
BL02823___top   1374 AGGCGACACGCTTTCCGTCCGGTCTTTGACAGAGACGAAG-GGTGAAACA   1422

BSNT_00741___   1420 AAGCCGCCTGCCCGCTTTAATGAAGGGACCTTGCTATCAGCGATGGAAAA   1469
                     ||.|||||.||.||.|||||||||||.||.|||||.||.||||||||.||
BL02823___top   1423 AAACCGCCGGCGCGGTTTAATGAAGGAACATTGCTGTCTGCGATGGAGAA   1472

BSNT_00741___   1470 CCCAAGCGCGTTTATGCAGGGAGAAGAAAAAGGCCTCGTCAAAACGCTTG   1519
                     .|||..|||.|||||||||||||||||||||..|||.||.|||||.||.|
BL02823___top   1473 TCCAGCCGCATTTATGCAGGGAGAAGAAAAAAACCTTGTGAAAACCCTCG   1522

BSNT_00741___   1520 GAGAAACAGGCGGCCTCGGCACGGTGGCAACGCGTGCCGACATTATTGAA   1569
                     ||||.||.|||||.||.||.|||||.||.||.||.|||||.|||||.|||
BL02823___top   1523 GAGAGACGGGCGGACTTGGGACGGTCGCGACACGCGCCGATATTATCGAA   1572

BSNT_00741___   1570 AAACTGTTCAACAGCTTTTTAATCGAGAAAAAAGGCCAAGATATTTTTAT   1619
                     ||.||||||||||..||..|.||.|||||||||||..|||||||||..||
BL02823___top   1573 AAGCTGTTCAACACGTTCCTGATTGAGAAAAAAGGAAAAGATATTTACAT   1622

BSNT_00741___   1620 CACATCTAAAGGAAAACAGCTCCTGCAGCTTGTTCCGGAGGATCTGAAAT   1669
                     .||.||.|||||||||||||||||..|||||||||||...|||.|.||||
BL02823___top   1623 TACTTCAAAAGGAAAACAGCTCCTTGAGCTTGTTCCGTCAGATTTAAAAT   1672

BSNT_00741___   1670 CACCGGCCTTAACAGCAGAATGGGAGCAAAAGCTGTCTGCAATCGCTGCC   1719
                     |.||||||.|.||.||.|||||||||||.||||||||.|..||.||....
BL02823___top   1673 CTCCGGCCCTCACCGCCGAATGGGAGCAGAAGCTGTCAGGCATTGCGAAA   1722

BSNT_00741___   1720 GGCAAATTGAAATCGGCTGTTTTTATTAAAGATATGAAGGCTTACGCTCA   1769
                     ||.||..|||||||..|.|..||.||||||||.|||||||..|||||..|
BL02823___top   1723 GGAAAGCTGAAATCTTCAGCCTTCATTAAAGAAATGAAGGAGTACGCAAA   1772

BSNT_00741___   1770 CCAAACGGTAAAAGAAATCAAAAACAGCAGCCAAACCTTCCGACATGACA   1819
                     .||.|||.|.|.|||||||||||.|||||..||||..||....||.||||
BL02823___top   1773 GCAGACGATCAGAGAAATCAAAAGCAGCAATCAAAAGTTTAAGCACGACA   1822

BSNT_00741___   1820 ACATTACGGGAACGGCA-TGTCCGGAATGCGGCAAAATGATGCTGAAAGT   1868
                     |.||.||.||||| .|| ||.||.||.|||||.|||.|||||||||||||
BL02823___top   1823 ATATCACAGGAAC-ACATTGCCCTGACTGCGGAAAACTGATGCTGAAAGT   1871

BSNT_00741___   1869 AAACGGCAAACGCGGTACGATGCTCGTGTGCCAAGATCGTGAATGCGGAA   1918
                     |||||||||||||||.||.||||||||.|||||.||..|.||.|||||  
BL02823___top   1872 AAACGGCAAACGCGGCACAATGCTCGTCTGCCAGGACAGGGAGTGCGG--   1919

BSNT_00741___   1919 GCA--GAAAAACGATTGCCCGAAAAACA----AACGCACGCTGCCCGAAC   1962
                     .||  |.||||||.|.|||    |||||    |||||.|||||||||...
BL02823___top   1920 CCATCGGAAAACGGTCGCC----AAACAGACGAACGCCCGCTGCCCGGTT   1965

BSNT_00741___   1963 TGCCATAAACGAATGGAGCTTCGCGGCCAAGGCGAGGGCCAAACCTTTGC   2012
                     ||||||||.||.||||||||.||||||||.||.||.||||||||||||||
BL02823___top   1966 TGCCATAAGCGCATGGAGCTGCGCGGCCACGGGGAAGGCCAAACCTTTGC   2015

BSNT_00741___   2013 GTGTGTGTGCGGTCACCGTGAAAAGCTCTCTGTATTTGAAAAACGAAAAA   2062
                     .|||||.|||||.|||||.|||||||||||.||.||.|||||.||.|.|.
BL02823___top   2016 CTGTGTCTGCGGCCACCGCGAAAAGCTCTCCGTTTTCGAAAAGCGCAGAG   2065

BSNT_00741___   2063 ACAAAGACA-------AAGCGCGTGCTACCAAACGGGACGTATCCTCTTA   2105
                     .||||||||       ||..||||    |.|||||.||.|||..||||||
BL02823___top   2066 CCAAAGACAAAAATTCAAAAGCGT----CAAAACGCGATGTACACTCTTA   2111

BSNT_00741___   2106 TATGAAAAAACAAAATAAAGATGAGCCGATTAACAACGCGCTGGCAGAAC   2155
                     .||||||||.|||||.||.|||||||||||.|||||.|||||.||.||||
BL02823___top   2112 CATGAAAAAGCAAAACAAGGATGAGCCGATCAACAATGCGCTCGCCGAAC   2161

BSNT_00741___   2156 AGCTGAAAAAACT--CGGTTTGGATAAATAA   2184
                     |||||||.||.||  .|.||  |||.|||||
BL02823___top   2162 AGCTGAAGAAGCTGAAGCTT--GATCAATAA   2190


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