Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00741 and BL02823
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence dna-align/BSNT_00741___topB.1.5803.seq
# -bsequence dna-align/BL02823___topB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00741___topB-BL02823___topB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00741___topB-BL02823___topB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00741___topB
# 2: BL02823___topB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2231
# Identity: 1697/2231 (76.1%)
# Similarity: 1697/2231 (76.1%)
# Gaps: 88/2231 ( 3.9%)
# Score: 6337.0
#
#
#=======================================
BSNT_00741___ 1 ------ATGTCAAAAACAGTTGTATTAGCTGAAAAACCTTCAGTCGGCAG 44
.||||.|||||||||||.|||||.||||||||||||||||||.|
BL02823___top 1 ATGGACGTGTCTAAAACAGTTGTTTTAGCAGAAAAACCTTCAGTCGGCCG 50
BSNT_00741___ 45 GGATTTAGCCCGGGTGCTGAAGTGCCATAAAAAAGGAAACGGTTATCTCG 94
.||.||.|||||.|||||||||||.|||||||||||||||||.|||||.|
BL02823___top 51 TGACTTGGCCCGCGTGCTGAAGTGTCATAAAAAAGGAAACGGATATCTTG 100
BSNT_00741___ 95 AAGGCGATCAATATATTGTGACCTGGGCTTTAGGCCATTTGGTGACGCTT 144
|||||||.|..|||||.|||||.|||||..|.||||||.||||.||..|.
BL02823___top 101 AAGGCGACCGCTATATCGTGACATGGGCGCTCGGCCATCTGGTCACATTG 150
BSNT_00741___ 145 GCTGATCCGGAAGGCTACGGAAAAGAATTTCAATCATGGCGCCTAGAGGA 194
||.||.||.|||||.||||||||.||||..||.||.|||||.||.||.||
BL02823___top 151 GCGGACCCTGAAGGATACGGAAAGGAATACCAGTCTTGGCGGCTTGAAGA 200
BSNT_00741___ 195 TCTGCCGATTATCCCAGAACCCTTGAAGCTTGTGGTGATAAAAAAAACCG 244
.||||||||.|||||.||.||.||.|||||.||.|||||.|||||.||||
BL02823___top 201 CCTGCCGATCATCCCTGAGCCTTTAAAGCTCGTCGTGATCAAAAAGACCG 250
BSNT_00741___ 245 GAAAGCAGTTCAATGCAGTCAAATCCCAGCTTACCCGTAAAGACGTCAAT 294
||||.|||||..|.||.||.|||||.|||||.|.|.|.|||||.|||||.
BL02823___top 251 GAAAACAGTTTCAGGCGGTAAAATCGCAGCTGATCAGAAAAGATGTCAAA 300
BSNT_00741___ 295 CAGATTGTCATCGCGACTGACGCAGGCCGGGAAGGTGAGCTTGTTGCGCG 344
.|.||.|||||.||.||.||.||.|||||||||||.|||||.||.||.||
BL02823___top 301 GACATCGTCATTGCAACCGATGCCGGCCGGGAAGGCGAGCTCGTCGCCCG 350
BSNT_00741___ 345 CTGGATCATTGAGAAAGCGAATGTC-CGAAAACCAATCAAGCGGCTGTGG 393
|||||||||.||.|||||.||.||| || ||.|||.|.|||||.||||||
BL02823___top 351 CTGGATCATCGAAAAAGCAAAGGTCACG-AAGCCATTGAAGCGTCTGTGG 399
BSNT_00741___ 394 ATTTCATCTGTGACGGATAAAGCGATCAAGGAAGGTTTTCAAAAGCT--- 440
|||||||||||.||.||.|||||||||||.||.||.||| ||||.||
BL02823___top 400 ATTTCATCTGTTACTGACAAAGCGATCAAAGACGGATTT-AAAAACTTAA 448
BSNT_00741___ 441 -GCGCAGCGGCAAAGAATATGAAAACCTTTACCATTCTGCCGTCGCCAGA 489
| |.|||||||||.|.||||||||||||||||||.||.||.||..||
BL02823___top 449 AG---AACGGCAAAGACTTTGAAAACCTTTACCATTCAGCTGTGGCTCGA 495
BSNT_00741___ 490 GCGGAAGCGGATTGGATTGTGGGGATCAATGCCACCCGTGCACTTACCAC 539
||.|||||.||||||||.||.||.|||||.||.||..|.||.||.||.||
BL02823___top 496 GCTGAAGCCGATTGGATCGTCGGCATCAACGCGACGAGGGCGCTGACAAC 545
BSNT_00741___ 540 AAAATTCAATGCCCAGCTCTCATGCGGGCGTGTGCAGACTCCGACGCTTG 589
.||||||||.||||||||.||.||||||||.||.|||||.||||||||.|
BL02823___top 546 GAAATTCAACGCCCAGCTTTCCTGCGGGCGCGTACAGACGCCGACGCTGG 595
BSNT_00741___ 590 CCATGATTGCAAAGCGCGAGGCAGACATTCAAG--CGTTTACGCCCGTTC 637
|.|||||.||.||..|.||||.|||.||| ||| | ||||..|||||.|
BL02823___top 596 CAATGATCGCCAAAAGAGAGGAAGATATT-AAGAAC-TTTAAACCCGTCC 643
BSNT_00741___ 638 CGTATTACGGCATCCGTGCTGTAGTCGACGGCATGACGCTGACGTGGCAG 687
|.||||.||||.|.||.||.|..||||||||||||||||||||.||||||
BL02823___top 644 CTTATTTCGGCTTGCGCGCAGCGGTCGACGGCATGACGCTGACATGGCAG 693
BSNT_00741___ 688 GATAAGAAA----TCAAAGCAGACGAGAACGTTCA----ATCAAGATGTA 729
||.|| ||| ||| |||||..|.||||||| ||| |||.
BL02823___top 694 GACAA-AAAGACGTCA---CAGACACGCACGTTCAACGCATC----TGTG 735
BSNT_00741___ 730 ACAAGCCGTCTGCT---AAAAAATCTCCAAGGAAAGCAAGCGGTCGTAGC 776
|| |.|| |.||| |..|...||.|||||.||.|..||.|||.|.|.
BL02823___top 736 AC--GTCG-CAGCTTGCAGGAGCGCTGCAAGGCAAACCGGCCGTCATCGT 782
BSNT_00741___ 777 TGAGCTGAAAAAAACAGCGAAAAAAAGCTTTGCGCCTGCGCTTTATGATT 826
.||..||||||||||.|||||||||||||||||.||.|..|||||||||.
BL02823___top 783 CGACTTGAAAAAAACGGCGAAAAAAAGCTTTGCTCCCGGACTTTATGATC 832
BSNT_00741___ 827 TAACGGAGCTGCAGCGTGACGCCCACAAGCGCTTCGGTTTTTCTGCTAAA 876
|.||.|||||||||.|.||||||||.||.||||||||.|||||.||.|||
BL02823___top 833 TGACTGAGCTGCAGAGGGACGCCCATAAACGCTTCGGCTTTTCCGCAAAA 882
BSNT_00741___ 877 GAAACGCTTTCTGTCCTGCAGAAGCTATATGAGCAGCATAAGCTCGTCAC 926
||||||||.||.||..||||||||||.|||||||||||.|||||||||||
BL02823___top 883 GAAACGCTGTCCGTTTTGCAGAAGCTCTATGAGCAGCACAAGCTCGTCAC 932
BSNT_00741___ 927 ATATCCGCGGACGGACTCTAGATTTTTATCCAGTGACATCATCCCAACGT 976
.|||||||||||||||||.||.|||.|.||||.|||||||.||||.|||.
BL02823___top 933 CTATCCGCGGACGGACTCAAGGTTTCTTTCCAATGACATCGTCCCGACGC 982
BSNT_00741___ 977 TAAAAGACCGTCTGGAAGGCATGGAAGTAAAACCGTATGCCCAATATGTC 1026
|.|||||||||.|||||||||||.|.||.||.||.||||||||..||||.
BL02823___top 983 TGAAAGACCGTTTGGAAGGCATGCAGGTGAAGCCTTATGCCCAGCATGTG 1032
BSNT_00741___ 1027 AGCCAAATTAAAAAACGCGGCATTAAATCTCATAAAGGATATGTCAATGA 1076
..||..||....||.||.||..|||||.|..|||||.|.|.||||||.||
BL02823___top 1033 GCCCGGATCCTGAAGCGGGGGGTTAAAGCCAATAAAAGCTTTGTCAACGA 1082
BSNT_00741___ 1077 CGCGAAGGTGTCAGACCACCACGCGATTATCCCGACCGAAGAGCCGCTCG 1126
.|||||.||.||.||.||||||||||||||.|||||.|||||||||||.|
BL02823___top 1083 TGCGAAAGTATCCGATCACCACGCGATTATTCCGACGGAAGAGCCGCTTG 1132
BSNT_00741___ 1127 TTCTCAGC-AGTCTGAGTGATAAAGAACGAAAGCTGTATGACCTGATTGC 1175
..|||.|| .|| |.||.||.||.|||.|||||||.||.||..||||.||
BL02823___top 1133 CGCTCGGCGCGT-TAAGCGAAAAGGAAAGAAAGCTTTACGATTTGATCGC 1181
BSNT_00741___ 1176 GAAACGTTTCCTTGCTGTATTAATGCCTGCATTCGAATATGAGGAAACAA 1225
|||.||.|||||.|||||.||||||||..|.||.||||||||.|||||||
BL02823___top 1182 GAAGCGCTTCCTCGCTGTTTTAATGCCGCCGTTTGAATATGAAGAAACAA 1231
BSNT_00741___ 1226 AGGTCATCGCAGAAATCGGCGGAGAAACCTTTAGGGCGAAAGGCAAAACC 1275
|.||..|.||.||||||||||||||||||||||.|||.|||||.|||||.
BL02823___top 1232 AAGTGTTTGCCGAAATCGGCGGAGAAACCTTTACGGCAAAAGGGAAAACA 1281
BSNT_00741___ 1276 GTGCAATCGCAAGGGTGGAAAGCCGTTTATGATATGGCGGATGAGGATGA 1325
||.||.||||||||.||||||||.||.||.|||.|.||.||.||.|||||
BL02823___top 1282 GTTCAGTCGCAAGGCTGGAAAGCGGTGTACGATTTCGCAGACGAAGATGA 1331
BSNT_00741___ 1326 TGAGCAGGAGGATGACAGAGACCAGACACTTC-----CTGCGCTTCAAAA 1370
|| |.|||||.||.|..||.||.||.|||| || ||| |||
BL02823___top 1332 TG---ACGAGGAAGAAAAGGATCAAACCCTTCCAAAACT-CGC----AAA 1373
BSNT_00741___ 1371 AGGCGACACACTTGCCGTCCGCACGTTAACGGAAAC-AAGCGGCCAAACG 1419
|||||||||.|||.|||||||..|.||.||.||.|| ||| ||..||||.
BL02823___top 1374 AGGCGACACGCTTTCCGTCCGGTCTTTGACAGAGACGAAG-GGTGAAACA 1422
BSNT_00741___ 1420 AAGCCGCCTGCCCGCTTTAATGAAGGGACCTTGCTATCAGCGATGGAAAA 1469
||.|||||.||.||.|||||||||||.||.|||||.||.||||||||.||
BL02823___top 1423 AAACCGCCGGCGCGGTTTAATGAAGGAACATTGCTGTCTGCGATGGAGAA 1472
BSNT_00741___ 1470 CCCAAGCGCGTTTATGCAGGGAGAAGAAAAAGGCCTCGTCAAAACGCTTG 1519
.|||..|||.|||||||||||||||||||||..|||.||.|||||.||.|
BL02823___top 1473 TCCAGCCGCATTTATGCAGGGAGAAGAAAAAAACCTTGTGAAAACCCTCG 1522
BSNT_00741___ 1520 GAGAAACAGGCGGCCTCGGCACGGTGGCAACGCGTGCCGACATTATTGAA 1569
||||.||.|||||.||.||.|||||.||.||.||.|||||.|||||.|||
BL02823___top 1523 GAGAGACGGGCGGACTTGGGACGGTCGCGACACGCGCCGATATTATCGAA 1572
BSNT_00741___ 1570 AAACTGTTCAACAGCTTTTTAATCGAGAAAAAAGGCCAAGATATTTTTAT 1619
||.||||||||||..||..|.||.|||||||||||..|||||||||..||
BL02823___top 1573 AAGCTGTTCAACACGTTCCTGATTGAGAAAAAAGGAAAAGATATTTACAT 1622
BSNT_00741___ 1620 CACATCTAAAGGAAAACAGCTCCTGCAGCTTGTTCCGGAGGATCTGAAAT 1669
.||.||.|||||||||||||||||..|||||||||||...|||.|.||||
BL02823___top 1623 TACTTCAAAAGGAAAACAGCTCCTTGAGCTTGTTCCGTCAGATTTAAAAT 1672
BSNT_00741___ 1670 CACCGGCCTTAACAGCAGAATGGGAGCAAAAGCTGTCTGCAATCGCTGCC 1719
|.||||||.|.||.||.|||||||||||.||||||||.|..||.||....
BL02823___top 1673 CTCCGGCCCTCACCGCCGAATGGGAGCAGAAGCTGTCAGGCATTGCGAAA 1722
BSNT_00741___ 1720 GGCAAATTGAAATCGGCTGTTTTTATTAAAGATATGAAGGCTTACGCTCA 1769
||.||..|||||||..|.|..||.||||||||.|||||||..|||||..|
BL02823___top 1723 GGAAAGCTGAAATCTTCAGCCTTCATTAAAGAAATGAAGGAGTACGCAAA 1772
BSNT_00741___ 1770 CCAAACGGTAAAAGAAATCAAAAACAGCAGCCAAACCTTCCGACATGACA 1819
.||.|||.|.|.|||||||||||.|||||..||||..||....||.||||
BL02823___top 1773 GCAGACGATCAGAGAAATCAAAAGCAGCAATCAAAAGTTTAAGCACGACA 1822
BSNT_00741___ 1820 ACATTACGGGAACGGCA-TGTCCGGAATGCGGCAAAATGATGCTGAAAGT 1868
|.||.||.||||| .|| ||.||.||.|||||.|||.|||||||||||||
BL02823___top 1823 ATATCACAGGAAC-ACATTGCCCTGACTGCGGAAAACTGATGCTGAAAGT 1871
BSNT_00741___ 1869 AAACGGCAAACGCGGTACGATGCTCGTGTGCCAAGATCGTGAATGCGGAA 1918
|||||||||||||||.||.||||||||.|||||.||..|.||.|||||
BL02823___top 1872 AAACGGCAAACGCGGCACAATGCTCGTCTGCCAGGACAGGGAGTGCGG-- 1919
BSNT_00741___ 1919 GCA--GAAAAACGATTGCCCGAAAAACA----AACGCACGCTGCCCGAAC 1962
.|| |.||||||.|.||| ||||| |||||.|||||||||...
BL02823___top 1920 CCATCGGAAAACGGTCGCC----AAACAGACGAACGCCCGCTGCCCGGTT 1965
BSNT_00741___ 1963 TGCCATAAACGAATGGAGCTTCGCGGCCAAGGCGAGGGCCAAACCTTTGC 2012
||||||||.||.||||||||.||||||||.||.||.||||||||||||||
BL02823___top 1966 TGCCATAAGCGCATGGAGCTGCGCGGCCACGGGGAAGGCCAAACCTTTGC 2015
BSNT_00741___ 2013 GTGTGTGTGCGGTCACCGTGAAAAGCTCTCTGTATTTGAAAAACGAAAAA 2062
.|||||.|||||.|||||.|||||||||||.||.||.|||||.||.|.|.
BL02823___top 2016 CTGTGTCTGCGGCCACCGCGAAAAGCTCTCCGTTTTCGAAAAGCGCAGAG 2065
BSNT_00741___ 2063 ACAAAGACA-------AAGCGCGTGCTACCAAACGGGACGTATCCTCTTA 2105
.|||||||| ||..|||| |.|||||.||.|||..||||||
BL02823___top 2066 CCAAAGACAAAAATTCAAAAGCGT----CAAAACGCGATGTACACTCTTA 2111
BSNT_00741___ 2106 TATGAAAAAACAAAATAAAGATGAGCCGATTAACAACGCGCTGGCAGAAC 2155
.||||||||.|||||.||.|||||||||||.|||||.|||||.||.||||
BL02823___top 2112 CATGAAAAAGCAAAACAAGGATGAGCCGATCAACAATGCGCTCGCCGAAC 2161
BSNT_00741___ 2156 AGCTGAAAAAACT--CGGTTTGGATAAATAA 2184
|||||||.||.|| .|.|| |||.|||||
BL02823___top 2162 AGCTGAAGAAGCTGAAGCTT--GATCAATAA 2190
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