Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00740 and BL02822
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence dna-align/BSNT_00740.1.5803.seq
# -bsequence dna-align/BL02822___lrpC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00740-BL02822___lrpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00740-BL02822___lrpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00740
# 2: BL02822___lrpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 327/549 (59.6%)
# Similarity: 327/549 (59.6%)
# Gaps: 126/549 (23.0%)
# Score: 1179.5
#
#
#=======================================
BSNT_00740 1 ATGTTCGGAAAACATTCATTTTTACATGCCTTTTCTAGGGAACTGTACTT 50
BL02822___lrp 0 -------------------------------------------------- 0
BSNT_00740 51 GTCATTTACAAAAATACCCGAGATAATGTGTACAAAATCAAAAAAGAAGG 100
BL02822___lrp 0 -------------------------------------------------- 0
BSNT_00740 101 ATGTTGAAATGAAACTTGACCAGATTGATCTGAATATCATTGAGGAGCTG 150
||||||.||||..|..|.|||.|.||.|||||.|..||..|.
BL02822___lrp 1 --------ATGAAAATTGATGATCTCGATTTTAAAATCATAGCCGAATTA 42
BSNT_00740 151 AAGAAGGACAGCCGTTTGTCGATGAGGGAATTAGGCAGAAAAATTAAGCT 200
|||||.|||||||||||.||||||.||||..|.|||||.||.||.|..||
BL02822___lrp 43 AAGAAAGACAGCCGTTTATCGATGCGGGAGCTGGGCAGGAAGATCAGCCT 92
BSNT_00740 201 GTCGCCTCCATCTGTGACAGAACGGGTAAGACAGCTTGAATCGTTTGGCA 250
.|||.|.||.||||||||.|||.|.||.||.|.|||.||||||||.|||.
BL02822___lrp 93 TTCGGCACCGTCTGTGACCGAAAGAGTCAGGCGGCTCGAATCGTTCGGCG 142
BSNT_00740 251 TCATTAAGCAATACACGCTGGAGGTCGACCAGAAAAAACTGGGGCTTCCC 300
||||.||..||||.||||||||..||||..|..||||..|.||.||||||
BL02822___lrp 143 TCATAAAAAAATATACGCTGGACATCGATTACCAAAAGGTCGGTCTTCCC 192
BSNT_00740 301 GTTTCCTGCATTGTGGAAGCAACCGTTAAAAACGCGGATTACGAGCGGTT 350
|||||||||||..|.||||||||.||.|||||||.|||.||||||.||||
BL02822___lrp 193 GTTTCCTGCATCATTGAAGCAACGGTGAAAAACGGGGAATACGAGAGGTT 242
BSNT_00740 351 CAAAAGC-TATATTCAAAC-ATTGCCGAATATTGAATTTTGCTACCGGAT 398
.||||| |||| ||.||| ..|.|||||.||||||||.|||||||||||
BL02822___lrp 243 -TAAAGCGTATA-TCGAACGCCTCCCGAACATTGAATTCTGCTACCGGAT 290
BSNT_00740 399 TGCGGGTGCAGCCTGCTATATGCTGAAAATCAATGCCGAAAGCCT--CGA 446
.|||||.||.||||||||||||||||||||||||||.||.||||| |||
BL02822___lrp 291 CGCGGGAGCTGCCTGCTATATGCTGAAAATCAATGCAGAGAGCCTGGCGA 340
BSNT_00740 447 AGCGGTAGAAGATTTCATTAACAAAACATCGCCCTACGCGCAAACCGTCA 496
| |.|.||||..||.||.||..||||.||.||.||.||.||||||||.|
BL02822___lrp 341 A--GATCGAAGCGTTTATCAATGAAACGTCTCCATATGCCCAAACCGTGA 388
BSNT_00740 497 CTCACGTCATTTTCTCAGAAATTGACACGAA--AAACGGGCGCGGTTAG 543
|.|||||.|||||.||.||||||||.||.|| ||.||.|.
BL02822___lrp 389 CACACGTGATTTTTTCGGAAATTGAAACAAAGGAATCGTGA-------- 429
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