Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00735 and BL02818
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence dna-align/BSNT_00735___ydaE.1.5803.seq
# -bsequence dna-align/BL02818___ydaE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00735___ydaE-BL02818___ydaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00735___ydaE-BL02818___ydaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00735___ydaE
# 2: BL02818___ydaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity: 362/519 (69.7%)
# Similarity: 362/519 (69.7%)
# Gaps: 30/519 ( 5.8%)
# Score: 1174.5
#
#
#=======================================
BSNT_00735___ 1 ---ATGGGCATCACGAAAGAAG----AAGTGAACAGCTACTATCAAAAAG 43
|.|| |.||.||.|||| ||.|||| |||||..|.||||
BL02818___yda 1 GTGAAGG---TGACAAAGGAAGATGTAATTGAA----TACTACGAGAAAG 43
BSNT_00735___ 44 CAGGGATTGT-ATTAACGGACGAGGAAGTAGACCAAATCCAGCTGATGGA 92
|.||.||||| .|.||| |||||.||...|||..|.|||||..|.|||||
BL02818___yda 44 CGGGCATTGTGCTGAAC-GACGATGATAAAGAAAACATCCAAATCATGGA 92
BSNT_00735___ 93 TTACGGCTTAGGAA-AAGAAAGAAAAG-TCGGGCTCCAGCTCTTCGTCTA 140
.|||||.||| || |||...||.||| |.|||||.|||||.||||||||
BL02818___yda 93 CTACGGATTA--AATAAGCTGGATAAGCTGGGGCTTCAGCTGTTCGTCTA 140
BSNT_00735___ 141 CGTCAATACAGACCGTTATTGTTCAAAGGAATTGGTGCTGTTTCCGGGAC 190
.|||||.||||||||.||.||..|.||.||..|.||..|.||.||.|.||
BL02818___yda 141 TGTCAACACAGACCGCTACTGCGCCAAAGAGCTCGTATTATTCCCTGAAC 190
BSNT_00735___ 191 AGACTTGCCCGGAACACCGCCATCCGCCGGTCGACGGCCAGGAAGGCAAG 240
|.||.|||||.||||||||.|||||.||.||.|||...|||.||||.|||
BL02818___yda 191 AAACATGCCCCGAACACCGGCATCCTCCTGTAGACAAGCAGAAAGGGAAG 240
BSNT_00735___ 241 CAGGAGACCTTCCGCTGCCGCTACGGAAAAGTGTATCTTTACGTAGAAGG 290
.|.|||||.|||.|.|||.|.|||||||||||||||.|.||.||||||||
BL02818___yda 241 GAAGAGACATTCAGGTGCAGATACGGAAAAGTGTATTTGTATGTAGAAGG 290
BSNT_00735___ 291 AGAAAAAAC----GCCGCTTCCAAAAGTTCTCCCTCCTCAGGAAGACAGA 336
||||||||| |||.|..|| |||.|.||.||..|.||.||.|..
BL02818___yda 291 AGAAAAAACGGAAGCCCCGGCC----GTTATGCCGCCGGACGAGGATATT 336
BSNT_00735___ 337 GAACACTATACGGTCTGGCACGAAATTGAGCTAGAACCGGGCGGGCAATA 386
|||||.|..||.||.||||||||||||.||||....||.||||..||.|.
BL02818___yda 337 GAACATTTCACCGTTTGGCACGAAATTCAGCTCACGCCCGGCGAACAGTT 386
BSNT_00735___ 387 TACAATCCCCCCGAATACAAAGCATTGGTTCCAGGCCGGGGA-AGAAGGT 435
|||.||.||.|||.|.||.||||||||||||.|.| |||||| .||||||
BL02818___yda 387 TACGATTCCGCCGGACACGAAGCATTGGTTCAAAG-CGGGGAGTGAAGGT 435
BSNT_00735___ 436 GCCGTCGTGACGGAAATGTCATCGACGAGCACGGATAAACATGATATCTT 485
||.||.||.|||||..|.||.||.||.|||||.|||.|.||.|||.|.||
BL02818___yda 436 GCGGTGGTCACGGAGTTTTCTTCAACAAGCACCGATGATCACGATGTGTT 485
BSNT_00735___ 486 TACCGATCCAAGAATATAA 504
.||.|||||.|||||.||.
BL02818___yda 486 CACAGATCCGAGAATTTAG 504
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