Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00700 and BL02815
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence dna-align/BSNT_00700___mtlD.1.5803.seq
# -bsequence dna-align/BL02815___mtlD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00700___mtlD-BL02815___mtlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00700___mtlD-BL02815___mtlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00700___mtlD
# 2: BL02815___mtlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1228
# Identity: 770/1228 (62.7%)
# Similarity: 770/1228 (62.7%)
# Gaps: 194/1228 (15.8%)
# Score: 2235.0
#
#
#=======================================
BSNT_00700___ 1 ATGATCGCCTTACATTTCGGTGCGGGAAATATCGGGAGAGGATTTATCGG 50
|||||.||..|.||||||||||||||.||.|||||..|.|||||||||||
BL02815___mtl 1 ATGATTGCACTGCATTTCGGTGCGGGGAACATCGGCCGCGGATTTATCGG 50
BSNT_00700___ 51 CGCGCTGCTTCACCACTCCGGCTATGATGTGGTGTTTGCGGATGTGAACG 100
.||..||||...|.|.||.||.||||||||.|||||.||.|||||
BL02815___mtl 51 AGCCTTGCTCTGCAAATCGGGGTATGATGTCGTGTTCGCCGATGT----- 95
BSNT_00700___ 101 AAACGATG--GTCAGCCTCCTCAATGAAAAAAAAGA---------ATACA 139
|||.|||| ||.| ||||||||...||.|| .||.|
BL02815___mtl 96 AAATGATGCCGTGA------TCAATGAACTGAACGATAAGGGCCGCTATA 139
BSNT_00700___ 140 CAGTGGAACTGGCGGA----AGAGGGACGTTCATCGGAGATCATTGGCCC 185
|.||.|||.||||.|| .||.|||.| || |||.|..||.||.||
BL02815___mtl 140 CCGTCGAAATGGCCGATGCCGGAAGGAAG--CA--GGAAACGATCGGACC 185
BSNT_00700___ 186 GGTGAGCGCTATTAACAGCGGCAGTCAGACCGAGGAGCTGTACCGGCTGA 235
|||..|.||.||.|||||.|..|..|||...||.||..|||| |||
BL02815___mtl 186 GGTCCGGGCGATCAACAGTGCGACCCAGCTTGACGAATTGTA-----TGA 230
BSNT_00700___ 236 T--------GAATGAGGCGGCGCTCATCACAACAGCTGTCGGCCCGAATG 277
| ||| ||.||.| ||..||||.|||||.||.||||||...|
BL02815___mtl 231 TTTGATAGCGAA--AGCCGAC-CTTGTCACCACAGCGGTAGGCCCGGCGG 277
BSNT_00700___ 278 TGCTGAAGCTGATTGCCCCGTCTATCGCAGAAGGTTTAAGACGAAG---- 323
||||.||..||||.||...|.|.||.||||||||||| ||||
BL02815___mtl 278 TGCTTAAATTGATCGCAGAGCCGATTGCAGAAGGTTT-----GAAGCGTC 322
BSNT_00700___ 324 ------AAATACTGCAAACA------CACTGAATATCATTGCCTGCGAAA 361
|||| ||||| |..|.|||||.||.||.|||||.|
BL02815___mtl 323 GGATGAAAAT-----AAACAAGCAGCCTTTAAATATTATAGCTTGCGAGA 367
BSNT_00700___ 362 ATATGATTGGCGGAAGCAGCT--TCTTAAAGAAAGAGATATACAGCCATT 409
|||||||.||.||.||| ||| ||||...| |.||.||.|.|..||..|
BL02815___mtl 368 ATATGATCGGGGGCAGC-GCTCATCTTCGCG-AGGAAATTTTCGCCCGCT 415
BSNT_00700___ 410 TAACGGAAGCAGA----GCAGAAATCCGTCAGTGAAACGGTAGGTTTTCC 455
||||.|||.|.|| ||.|.|| ||||.||..|.||.||.|||||
BL02815___mtl 416 TAACTGAAACGGAGCGCGCCGCAA----TCAGCGATTCAGTCGGCTTTCC 461
BSNT_00700___ 456 GAATTCTGCCGTTGACCGGATCGTCCCGATTCAGCATCATGAAGACCCGC 505
|||.||.||.||.|||.|.|||||.|||||.|||||.|||||.||.|||.
BL02815___mtl 462 GAACTCGGCAGTCGACAGAATCGTGCCGATCCAGCACCATGATGATCCGT 511
BSNT_00700___ 506 TGAAAGTATCGGTTGAACCATTTTTCGAATGGGTCATTGATGAATCAGGC 555
||||||||.||||.||.||.|||||||||||||.|.|||||.||.| ||.
BL02815___mtl 512 TGAAAGTAACGGTGGAGCCTTTTTTCGAATGGGCCGTTGATCAAAC-GGA 560
BSNT_00700___ 556 TTTAAAGGGAAAA-CACCAGTCATAAACGGCGCACTG---TTTGTTGATG 601
.||....|||||| ..||.|..||..|.||.| || |.|||.|..|
BL02815___mtl 561 ATTCGCCGGAAAAGTGCCGGATATTGAAGGTG---TGACATATGTAGCGG 607
BSNT_00700___ 602 ATTTAACGCCGTACATCGAACGGAAGCTGTTTACGGTCAATACCGGACAC 651
||.|..||||.|.|||||||.|.|||||||||||||||||||||||||||
BL02815___mtl 608 ATCTTGCGCCATTCATCGAAAGAAAGCTGTTTACGGTCAATACCGGACAC 657
BSNT_00700___ 652 GCGGTGACAGCGTATGTCGGCTATCAGCGCGGACTCAAGACGGTCAAAGA 701
||..||.|.|||||||.|||||||.||...||..|.||||||.|.|||||
BL02815___mtl 658 GCCATGGCGGCGTATGCCGGCTATAAGAAAGGTTTGAAGACGATAAAAGA 707
BSNT_00700___ 702 AGCAATCGATCATCCGGAAATCCGCC-----GTGTCGTTCATTCGGCGCT 746
.||.||..||||||||||..|||||| |||.| .|||||
BL02815___mtl 708 CGCCATTCATCATCCGGAGGTCCGCCAAACGGTGGC-------AGGCGC- 749
BSNT_00700___ 747 GCT---TGAAACTGGTGACTATCTCGTCAAATCGTATGGCTTTA---AGC 790
||| .|||||.||....||.||.|||.||.|.||.|..|||| ||.
BL02815___mtl 750 GCTAGAAGAAACAGGCCGGTACCTTGTCCAAACATACGATTTTACACAGG 799
BSNT_00700___ 791 AAACTGAACA-CGAACAATATATCAAAAAAATCATCGGTCGCTTTGAAAA 839
|| ||.|| ||..| ||||||.|.||||||.|||||.||||||||.||
BL02815___mtl 800 AA---GAGCACCGGGC-ATATATGACAAAAATTATCGGCCGCTTTGAGAA 845
BSNT_00700___ 840 T-----CCTTTCATTTCGGACGATGTGACCCGCGTAGCGAGGTCACCTCT 884
| |||.||| ||||||||.|||||.||.||.|||||.||.||
BL02815___mtl 846 TGAATGCCTGTCA-----GACGATGTCACCCGTGTGGCCAGGTCGCCGCT 890
BSNT_00700___ 885 CAGAAAACT-----GGGAGAAAATGATAGGCTTGTAGGCCCGGCAAAGAA 929
..|.||.|| ||| ||||..|.|||||.||||||||...|||
BL02815___mtl 891 TCGCAAGCTTGGCAGGG-----ATGACCGTCTTGTCGGCCCGGCCCGGAA 935
BSNT_00700___ 930 AATAAAA----------------GAACC-GAATGCACTGGCGGAAGGAAT 962
..| ||||| |...|| ||.||.|||||.||
BL02815___mtl 936 GCT----TTGCGATCTCGGCTTTGAACCTGTCCGC-CTTGCAGAAGGCAT 980
BSNT_00700___ 963 TGCCGCAGCACTGCGCTTCGATTTCACCGGTGACCCTGAAGCGGTTGAAC 1012
||||...||.||||..||.||||...|||.|||.||.|||||.|||.|.|
BL02815___mtl 981 TGCCCTGGCGCTGCAGTTTGATTGTGCCGATGATCCGGAAGCCGTTCAGC 1030
BSNT_00700___ 1013 TGC-AAGCGCTGATCGAAGAAAAAGGATACAGCGGCGTACTTCAAGAGGA 1061
|.| |||| .||||||..||||||||.||...||||||.||||..||.|.
BL02815___mtl 1031 TTCAAAGC-ATGATCGCTGAAAAAGGCTATGCCGGCGTGCTTCGCGACGT 1079
BSNT_00700___ 1062 GTGCGGCATTCAGTCCCATGAACCGTTGCACGCCATCAT--TTTAAAGAA 1109
.||||| |.|| |||..| .||||| ||||...||
BL02815___mtl 1080 ATGCGG-----ACTC----GAAGAG--------GATCATTCTTTATTCAA 1112
BSNT_00700___ 1110 ACT--TAATCA---AT---AA------- 1122
||| |||||| || ||
BL02815___mtl 1113 ACTGGTAATCAGCCATTTGAAAGCATAG 1140
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