Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00716 and BL02810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence dna-align/BSNT_00716___kipA.1.5803.seq
# -bsequence dna-align/BL02810___kipA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00716___kipA-BL02810___kipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00716___kipA-BL02810___kipA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00716___kipA
# 2: BL02810___kipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1069
# Identity: 710/1069 (66.4%)
# Similarity: 710/1069 (66.4%)
# Gaps: 110/1069 (10.3%)
# Score: 2207.5
#
#
#=======================================
BSNT_00716___ 1 TTGAGCATGAAAGTATTAAAGCCCGGACTGCTCACAACGGTTCAGGATAT 50
||||||||..||||.||||||||.||.|||.|.|||||||||||.||..|
BL02810___kip 1 TTGAGCATAGAAGTGTTAAAGCCGGGTCTGATGACAACGGTTCAAGACTT 50
BSNT_00716___ 51 AGGCAGAACGGGTTACCAAAAATACGGCGTTCTGGCCAGCGGCGCTATGG 100
.|||.|.||.||||..||||||||||||||.||.|.||||||.||.||||
BL02810___kip 51 GGGCCGCACAGGTTTTCAAAAATACGGCGTGCTTGTCAGCGGTGCCATGG 100
BSNT_00716___ 101 ACACGGTATCACTGCGCATTGCCAATTTGTTGATAGGAAACGGTGAAAAT 150
|..|.|..||..||||.|||||||||.||.|....||.|||.|..|.||.
BL02810___kip 101 ATGCCGATTCTTTGCGGATTGCCAATCTGCTCGCGGGGAACAGCCAGAAC 150
BSNT_00716___ 151 GAAGCAGGTCTCGAAATAACGATGATGGGGCCCGGTCCGTCGTTTCATTT 200
|||||.|..||.|||.|.|||.||||||||||.||.||||| |.||...|
BL02810___kip 151 GAAGCTGCGCTTGAAGTGACGCTGATGGGGCCGGGGCCGTC-TCTCCGCT 199
BSNT_00716___ 201 TTCAAAA--CAGACACTGATTGCTGTGACAGGGGCGGAC--TTCAC-GCT 245
||||||| |.| |.||.||.||.|||||.||.||.||| ||||| |.|
BL02810___kip 200 TTCAAAAACCTG-CTCTTATAGCGGTGACGGGCGCTGACTTTTCACTGAT 248
BSNT_00716___ 246 GCGTATTAATGACGAGGAAGCGCCTTTATGGAAGCCTGTGCTCATTAAGG 295
| ||| ||||||||.||||..||..|.|||...||.||..||||.||.|
BL02810___kip 249 G-GTA--AATGACGAAGAAGTCCCGCTTTGGCGCCCGGTTTTCATCAAAG 295
BSNT_00716___ 296 AAAACAGC------ACAGTCAGCTTTGGCCCCTGCAAACTCGGCAGCCGT 339
|...|||| ||| ||.|||...|||||.|.|||.||||||
BL02810___kip 296 AGGGCAGCGTGTTGACA------TTCGGCATGTGCAAGCGCGGAAGCCGT 339
BSNT_00716___ 340 GCTTATTTGGCGGCAGCCGGCGGCATCGAGGTGCCTGCC-GTCATGGATA 388
||.|||.||||.|..|||||.||.||.||.||||| ||| ||.|||||.|
BL02810___kip 340 GCATATATGGCAGTGGCCGGGGGAATTGATGTGCC-GCCTGTAATGGAAA 388
BSNT_00716___ 389 GTAAAAGCACATACGTCAGAGGAAGCATCGGCGGACTTCATGGCAGAGCG 438
|.|||||||||||.|||||||.|.|..|||||||..||||.||.||.|||
BL02810___kip 389 GCAAAAGCACATATGTCAGAGCAGGACTCGGCGGCTTTCAAGGAAGGGCG 438
BSNT_00716___ 439 CTTCAAAAAGAAGATGAACTGAACATTGGAGAGATGTCAGCTCTTTCGCA 488
|||||||| .|||||..||| |.||||.
BL02810___kip 439 CTTCAAAA------------------GGGAGACGTGT------TATCGCT 464
BSNT_00716___ 489 AACCATCC---------TTTC----CCGCT------TAAGTTCGCTG-CT 518
|..||.|| |.|| .|||| .|||.||||.| |.
BL02810___kip 465 AGGCAGCCCGACGCCGTTGTCGGAAGCGCTGCACAGAAAGCTCGCAGACG 514
BSNT_00716___ 519 TGG----AAAACAGGGATTTGCAGCACCGAAGTGGTCAGTCAGCCGCGGC 564
.|| |.|||.|||.|||||.||.|||||||||.|.|||..|| ||
BL02810___kip 515 AGGGCAAAGAACGGGGCTTTGCGGCTCCGAAGTGGGCTGTCGACC---GC 561
BSNT_00716___ 565 AGA---TTTCTGCCATTGAAGAAGAATCCCGTTATTCGGGTGCTGGAAGG 611
|.| |||||.||..|.||.|||||.||.||.|||||.||..|..||||
BL02810___kip 562 AAATATTTTCTCCCGCTAAAAAAGAACCCGGTCATTCGTGTCATCAAAGG 611
BSNT_00716___ 612 AAAGCAATTTGCCTTTTTCACAGAAGAATCAAAAACGCGTTTTTATGAAG 661
..|.||.|||||.|..||.||...|..||||.||..|||.||||..|..|
BL02810___kip 612 CGATCAGTTTGCTTGCTTTACCTCATCATCACAAGAGCGCTTTTTCGCGG 661
BSNT_00716___ 662 AAGCATTTCGTGTCACGCCGCAGTCCGACCGTATGGGCTACAGGCTCAAA 711
...||||.||.||.|||.|..|.||||||||.|||||.|||.|.||..||
BL02810___kip 662 GTCCATTCCGGGTGACGGCTAAATCCGACCGGATGGGGTACCGTCTTCAA 711
BSNT_00716___ 712 GGAGAACCGCTCGAACTGA---AGGCCCCGCTTGAGATGGTGTCGGAAGC 758
|||||..||||||||||.| || ||.||.||.|||.|.||.|||||
BL02810___kip 712 GGAGAGGCGCTCGAACTCACTCAG---CCTCTGGAAATGATCTCTGAAGC 758
BSNT_00716___ 759 GGTTTCATTCGGAACAGTTCAGGTGCCGCCTGACGGCAACCCGATTATCC 808
|||.|||||||||||..||||.||||||||.||||||||.|||||..|.|
BL02810___kip 759 GGTATCATTCGGAACGATTCAAGTGCCGCCCGACGGCAATCCGATCGTTC 808
BSNT_00716___ 809 TGCTTGCAGACCGGCAGACGACTGGCGGCTATCCGAGGATCGCGCACATC 858
|.||.||||||.|||||||..|.|||||.||.|||||.|||||.||.|||
BL02810___kip 809 TTCTCGCAGACAGGCAGACAGCGGGCGGATACCCGAGAATCGCCCATATC 858
BSNT_00716___ 859 ATATCCGCTGATCTTCCGATTGTTTCCCAAATCATGCCGGGCGAGCACGT 908
..|||.||||||.||.|....||..|.||.||.||||||||||||||.||
BL02810___kip 859 GCATCAGCTGATTTTTCTCAGGTCACGCAGATGATGCCGGGCGAGCAGGT 908
BSNT_00716___ 909 TCAGTTTGAGCCTGTGTCCCTCCAGGAGGCAGAAGCGC--TTGCGGTAGA 956
.||||||.|||.|||...|||.|||||.|||| ||||| ||.| .|.||
BL02810___kip 909 GCAGTTTCAGCTTGTCAGCCTTCAGGAAGCAG-AGCGCGTTTAC-ATCGA 956
BSNT_00716___ 957 ACGGGA-ACAGCATATAAAAGAA----CTGAAAACGAGAATGAAGATGGA 1001
|||||| || |.|.||.|..||| ||| |..||.|||||.|.||
BL02810___kip 957 ACGGGAGAC-GAAAATCAGCGAACTTTCTG----CCCGATTGAAGCTTGA 1001
BSNT_00716___ 1002 ATGGCTGACATAG------ 1014
|| |||| |
BL02810___kip 1002 AT-----ACAT-GTTATGA 1014
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