Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00715 and BL02809

See Amino acid alignment / Visit BSNT_00715 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence dna-align/BSNT_00715___kipI.1.5803.seq
#    -bsequence dna-align/BL02809___kipI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00715___kipI-BL02809___kipI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00715___kipI-BL02809___kipI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00715___kipI
# 2: BL02809___kipI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity:     502/795 (63.1%)
# Similarity:   502/795 (63.1%)
# Gaps:         132/795 (16.6%)
# Score: 1445.5
# 
#
#=======================================

BSNT_00715___      1 ATGACTGTACGATATCAAA------TCGAA-------------CAGCTCG     31
                                  .|.|||      |||||             |.|||||
BL02809___kip      1 -------------TTGAAAAATCTTTCGAATGCGACAATGTCTCCGCTCG     37

BSNT_00715___     32 GTGATTCTGCAATGATGATCC-GATTCGGAGAAGAAATCAATGAACAGGT     80
                     |.||.||.||..|.||.|||| |.|| |||||.|..||.|..||||||  
BL02809___kip     38 GCGACTCCGCGGTTATCATCCAGCTT-GGAGAGGGGATAAGCGAACAG--     84

BSNT_00715___     81 CAACGGCA--TTGTC--CACGCCGCGGCCGCTTA-------TATAGAAGA    119
                       || |||  .||||  ||    |||  ||||.|       .||.||| |
BL02809___kip     85 --AC-GCACCGTGTCGTCA----GCG--CGCTGACAAAGCGGATTGAA-A    124

BSNT_00715___    120 AC-AGCCATTTCCGGGATTCATTGAATGTATCCCGGCTTTTACAAGTCTA    168
                     || |.||.|||||.||.||.|||||.|||.|.||||||||.||.|||.|.
BL02809___kip    125 ACGATCCGTTTCCCGGTTTTATTGAGTGTGTGCCGGCTTTCACGAGTGTG    174

BSNT_00715___    169 ACTGTATTTTATGATATGTATGAAGTGTA---CAAGCAT---TTGCCTCA    212
                     ||.||.||.|||.|....|.||||||.||   |||| ||   ..||..||
BL02809___kip    175 ACCGTTTTCTATCAGCCATTTGAAGTATACCGCAAG-ATGGAGAGCGGCA    223

BSNT_00715___    213 AGGC-----ATAAGCTCACCTTTTGAGAAGGTCAAGTGC-----------    246
                     ||||     ||    ||.||.|.|||.||||| ||..||           
BL02809___kip    224 AGGCTGTTGAT----TCTCCGTATGAAAAGGT-AAAAGCCCTCCTCGACC    268

BSNT_00715___    247 --GATGTCGAAGAGCGC---CTGGCAGAAATAGCCGAAGACTATGAGGTC    291
                       .||.||.||||||.|   .|||.||||       .||||    ||.||
BL02809___kip    269 ATCATCTCCAAGAGCTCACAATGGAAGAA-------GAGAC----AGATC    307

BSNT_00715___    292 AACCGC-CGTATTGTAGAAATTCCTGTCTGCTATGGCGGTGAATTTGGTC    340
                      |.||| ||    ||.||||||||.||.||.||.|||||....||.||.|
BL02809___kip    308 -AGCGCACG----GTGGAAATTCCGGTTTGTTACGGCGGCCGTTTCGGCC    352

BSNT_00715___    341 CGGATTTAGAAGAGGTGGCGAAGATCAATCAG-----CTGTCACCGGAGG    385
                     |.|||||.||.||.|||||..|.||||| |.|     ||| |||   |||
BL02809___kip    353 CTGATTTGGAGGAAGTGGCCGACATCAA-CGGCCTGACTG-CAC---AGG    397

BSNT_00715___    386 AAGTAATCGACATTCATACAAACGGTGAATATGTGGTGTATATGCTTGGC    435
                     ||||.|||||.|||||.||....|||||.||..|.||.||||||.|.|||
BL02809___kip    398 AAGTCATCGATATTCACACCTCGGGTGAGTACCTCGTTTATATGATCGGC    447

BSNT_00715___    436 TTCGCGCCCGGTTTTCCTTTTCTAGGCGGGATGTC--AAAACGCATTGCA    483
                     ||.|||||.||.||.||||..||||||||.|||||  ||||  .||.||.
BL02809___kip    448 TTTGCGCCGGGCTTCCCTTACCTAGGCGGAATGTCTGAAAA--GATAGCC    495

BSNT_00715___    484 GCTCCGAGAAAATCATCGCCAAGACCGTCGATTCCCGCAGGTTCGGTCGG    533
                     ||.|||.|....|||||.||..|..|.|||||||||||.|||||.|||||
BL02809___kip    496 GCACCGCGGCGGTCATCTCCTCGGACTTCGATTCCCGCCGGTTCAGTCGG    545

BSNT_00715___    534 TATTGCGGGATTGCAGACAGGCGTTTACCCGATTTCAACGCCGGGCGGCT    583
                     .||.||.||..||||.||||||||.||.||..||||||||||||||||||
BL02809___kip    546 AATAGCCGGCATGCAAACAGGCGTCTATCCCCTTTCAACGCCGGGCGGCT    595

BSNT_00715___    584 GGCAGCTGATCGGCAAAACGCCGCTGGCTCTTTTCCGGCCGCAGGAAAAC    633
                     ||||||||||||||||.||||||||.|...|.|||..|||..|.|||.|.
BL02809___kip    596 GGCAGCTGATCGGCAATACGCCGCTTGAATTATTCAAGCCTTATGAACAG    645

BSNT_00715___    634 CCGCCGA-CATTGCTGCGGGCGGGAGATACTGTGAAATTCGTTCGCATCT    682
                     ||.|||| |.|| |||.|.||.||.||||..||||||||.||..||.|..
BL02809___kip    646 CCTCCGAGCCTT-CTGAGAGCAGGGGATATCGTGAAATTTGTCAGCGTGA    694

BSNT_00715___    683 CAGAAAAAGACTATCACGC-CTATAAGGAGGAGTCCAA---TTGA    723
                     |||||.|.||.|||||||| || .|||||||.|   ||   ||||
BL02809___kip    695 CAGAAGAGGAGTATCACGCGCT-GAAGGAGGGG---AAATCTTGA    735


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00715 and BL02809

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
