Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00712 and BL02807
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:20
# Commandline: needle
# -asequence dna-align/BSNT_00712___ycsG.1.5803.seq
# -bsequence dna-align/BL02807___ycsG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00712___ycsG-BL02807___ycsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00712___ycsG-BL02807___ycsG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00712___ycsG
# 2: BL02807___ycsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1240
# Identity: 902/1240 (72.7%)
# Similarity: 902/1240 (72.7%)
# Gaps: 53/1240 ( 4.3%)
# Score: 3182.0
#
#
#=======================================
BSNT_00712___ 1 ATGGAGCAGCAGAAAAAGACAGCAGGAAAAAAAGCG------GGAAGCTG 44
.||.|.||..|.||||| ||.||||||| ||.|.|||
BL02807___ycs 1 TTGAAACAAAATAAAAA---------AACAAAAGCGCCGGCAGGCAACTG 41
BSNT_00712___ 45 GTCATTGCTGATGGGCGCCGCCTTTTTAATGGCGACATCAGCAATCGGAC 94
|.|.|||||..||||||||||.|||||||||||.|||||.||||||||.|
BL02807___ycs 42 GACGTTGCTTTTGGGCGCCGCTTTTTTAATGGCCACATCTGCAATCGGGC 91
BSNT_00712___ 95 CGGGTTTCCTCACCCAAACCGCAACATTCACAAACACACTC----GCAGC 140
||||.||..|.||.||||||.||..||| .|||||.|| ||.||
BL02807___ycs 92 CGGGATTTTTAACACAAACCACAGTATT----TACACAATCTTTGGCCGC 137
BSNT_00712___ 141 AAGCTTCGGTTTTGTCATCTTAATCTCTATTATTTTAGATATTTTCGCCC 190
|||||||||.|||||||||.|..|.||.||.|||||||||||||||||||
BL02807___ycs 138 AAGCTTCGGCTTTGTCATCCTCGTTTCCATCATTTTAGATATTTTCGCCC 187
BSNT_00712___ 191 AAACCAATGTGTGGCGCATCATCGCAGTTTCTGGAAAACGAGGTCAGGAA 240
||||||||||||||.|.||.||.||.|||||||.||||.||||.||||||
BL02807___ycs 188 AAACCAATGTGTGGAGAATTATTGCGGTTTCTGAAAAAAGAGGGCAGGAA 237
BSNT_00712___ 241 ATTGCGAATATGGTGCTT-CCCGGACTGGGATATTTCATCGCCATTCTCG 289
||.||.||..|.|| ||| ||.|||||.||.|||||.||||||.||||.|
BL02807___ycs 238 ATCGCCAACCTCGT-CTTACCGGGACTCGGCTATTTTATCGCCTTTCTTG 286
BSNT_00712___ 290 TCGTGCTTGGCGGACTAGCTTTTAATATTGGGAATATCGGAGGGGCCGGG 339
||||.||.|||||.||.||.||.||.||.||.|||||||||||.|||||.
BL02807___ycs 287 TCGTTCTGGGCGGGCTTGCCTTCAACATCGGCAATATCGGAGGCGCCGGT 336
BSNT_00712___ 340 CTGGGACTTCAGGTGCTGTTCGGCATTACACCTGAAACAGGCGCTTTAAT 389
||.||..|.|||||..|.|||||||||.|.||..|.|..||.||..|.||
BL02807___ycs 337 CTCGGCATGCAGGTTTTATTCGGCATTTCGCCGCAGATGGGAGCCATCAT 386
BSNT_00712___ 390 CAGTGCCGTTATCGCCATTTTGATTTTTGTCATCAAGGAAGCAGGAAAAG 439
|||.|||||.|||||.||||||||.||||||||.||.|||||.|||||||
BL02807___ycs 387 CAGCGCCGTCATCGCGATTTTGATCTTTGTCATTAAAGAAGCGGGAAAAG 436
BSNT_00712___ 440 CGATGGACCGTTTTACGCAAATCGCGGGGTTCGTGATGATTATTTTAACG 489
||||||||||.|||||||..|||||.||.||.||.||||||.|..|.|||
BL02807___ycs 437 CGATGGACCGGTTTACGCTGATCGCAGGCTTTGTCATGATTTTACTGACG 486
BSNT_00712___ 490 GTCTACGTTGCGGCGACGACAGCTCCTCCGGTCGGACAGGCAGTCG---- 535
||.|||||.||.|..||.||.|..||||||||.|| ||.|| ||
BL02807___ycs 487 GTGTACGTCGCTGTCACCACCGGACCTCCGGTAGG---GGAAG-CGATAA 532
BSNT_00712___ 536 CAAATACATTCGTCCCGGAACACATCAGCATAT-TTGCCATTGTCACCCT 584
|.||.||..||.|.||.||..|||| .|..||| ||||.|||.|.||.||
BL02807___ycs 533 CGAAGACGGTCATGCCTGATAACAT-TGATTATCTTGCGATTATAACGCT 581
BSNT_00712___ 585 AGTGGGCGGAACCGTCGGCGGTTATATCACATTTGCCGGAGGACACCGTT 634
.||.|||||.||.||||||||.||.||.|||||||||||.||||||||.|
BL02807___ycs 582 TGTCGGCGGTACGGTCGGCGGATACATTACATTTGCCGGCGGACACCGAT 631
BSNT_00712___ 635 TGCTTGATGCCGGAATTAAAGGGAAGGAATCCATTCCGCAGGTGACAAAA 684
||||||||||.||..|||||||||||||..|.||.||..|.||.||.|||
BL02807___ycs 632 TGCTTGATGCGGGTGTTAAAGGGAAGGATGCGATCCCTGAAGTAACGAAA 681
BSNT_00712___ 685 AGCTCGGTTGTCGGCATTTTAATTACATCTGTCATGCGTATCGCTCTTTT 734
|||||.|||..|||||||||.||.||.|||||||||.|.||.||.|||||
BL02807___ycs 682 AGCTCTGTTTCCGGCATTTTGATCACGTCTGTCATGAGGATTGCGCTTTT 731
BSNT_00712___ 735 TCTTGCGGTTCTAGGCGTTGTATCGAAAGGCCTGCACATCGATGAAAGC- 783
.|||||.||.||.|||||.|||||.|||||..|||| |||.||..|
BL02807___ycs 732 CCTTGCCGTACTTGGCGTCGTATCAAAAGGTATGCA----GATTAATCCG 777
BSNT_00712___ 784 ---AACCCGGCGGCTTCTGTCTTCAAGCTGGCTGCTGGAAATGTCGGTTA 830
||.|||.||||.||.||.|||.|||..||.||.|||||||||||.||
BL02807___ycs 778 GATAATCCGCCGGCATCAGTATTCCAGCATGCCGCAGGAAATGTCGGATA 827
BSNT_00712___ 831 TAAAATTTTCGGATTGATCATGTGGTCTGCGGCGATTACGTCTGTTATTG 880
.|||||.|||||..|..||||||||...||.||.|||||.||.||.||.|
BL02807___ycs 828 CAAAATCTTCGGCCTCGTCATGTGGAGCGCTGCTATTACATCCGTGATCG 877
BSNT_00712___ 881 GAGCAGCCTATACATCTGTTTCATTTTTCAAGACCTTTTCTCCAAAAATT 930
|.||.||.|||||.||.||.|||||.||.||.||.||||||||.|||||.
BL02807___ycs 878 GTGCTGCTTATACGTCGGTATCATTCTTTAAAACGTTTTCTCCGAAAATC 927
BSNT_00712___ 931 GAAAAGAATTCACGCGGTATTATTATCGGATTTATTGTGGTTTCTACG-T 979
|||||||||||||||||.|||||.||.|..||||||.|.||.||.||| |
BL02807___ycs 928 GAAAAGAATTCACGCGGCATTATAATTGTCTTTATTATTGTATCAACGCT 977
BSNT_00712___ 980 TAGCTTTTGTCACAATCGGCCAGCCTGCGAAGATCCTCGTCCTTGTCGGT 1029
|.|| |||||.|||||.||..||||.|..||..|.|||||.||||.|||.
BL02807___ycs 978 TTGC-TTTGTAACAATTGGAAAGCCGGTCAACCTTCTCGTTCTTGCCGGC 1026
BSNT_00712___ 1030 TCACTGAACGGCTTAATTCTGCCGATTGCGCTCGGAACGCTGCTTGTT-- 1077
.||.|.|||||||||||..|||||||.||.|| |.|||.|.|.||
BL02807___ycs 1027 GCATTAAACGGCTTAATCTTGCCGATCGCACT----AGGCTCCCTTTTAA 1072
BSNT_00712___ 1078 --GCCGCCTACAAGAAAAACATTGTCGGTGATTATAAGCATCCGCTTTGG 1125
|.|||..|.|||||.||..|..||||.||.||.|.|||||||.|.|||
BL02807___ycs 1073 TCGGCGCACATAAGAAGAATGTCATCGGCGACTACAGGCATCCGATCTGG 1122
BSNT_00712___ 1126 CTGACAAGCACAGGCGCGCTTGTAGTGATTGTAATGGCAGTTATGGGAAT 1175
||.||||...|.|||...||.||.||.|||||.|||||..|.||||||..
BL02807___ycs 1123 CTTACAATTCCGGGCATTCTGGTCGTTATTGTCATGGCCATCATGGGAGG 1172
BSNT_00712___ 1176 CTACACGTTAATTACACAACTTCCTCAATTGTGGAGCTGA 1215
|||.||||||||.|...||.|||||.|.||.|||.|.|||
BL02807___ycs 1173 CTATACGTTAATCAATGAAATTCCTAAGTTATGGGGATGA 1212
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