Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00712 and BL02807

See Amino acid alignment / Visit BSNT_00712 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_00712___ycsG.1.5803.seq
#    -bsequence dna-align/BL02807___ycsG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00712___ycsG-BL02807___ycsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00712___ycsG-BL02807___ycsG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00712___ycsG
# 2: BL02807___ycsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1240
# Identity:     902/1240 (72.7%)
# Similarity:   902/1240 (72.7%)
# Gaps:          53/1240 ( 4.3%)
# Score: 3182.0
# 
#
#=======================================

BSNT_00712___      1 ATGGAGCAGCAGAAAAAGACAGCAGGAAAAAAAGCG------GGAAGCTG     44
                     .||.|.||..|.|||||         ||.|||||||      ||.|.|||
BL02807___ycs      1 TTGAAACAAAATAAAAA---------AACAAAAGCGCCGGCAGGCAACTG     41

BSNT_00712___     45 GTCATTGCTGATGGGCGCCGCCTTTTTAATGGCGACATCAGCAATCGGAC     94
                     |.|.|||||..||||||||||.|||||||||||.|||||.||||||||.|
BL02807___ycs     42 GACGTTGCTTTTGGGCGCCGCTTTTTTAATGGCCACATCTGCAATCGGGC     91

BSNT_00712___     95 CGGGTTTCCTCACCCAAACCGCAACATTCACAAACACACTC----GCAGC    140
                     ||||.||..|.||.||||||.||..|||    .|||||.||    ||.||
BL02807___ycs     92 CGGGATTTTTAACACAAACCACAGTATT----TACACAATCTTTGGCCGC    137

BSNT_00712___    141 AAGCTTCGGTTTTGTCATCTTAATCTCTATTATTTTAGATATTTTCGCCC    190
                     |||||||||.|||||||||.|..|.||.||.|||||||||||||||||||
BL02807___ycs    138 AAGCTTCGGCTTTGTCATCCTCGTTTCCATCATTTTAGATATTTTCGCCC    187

BSNT_00712___    191 AAACCAATGTGTGGCGCATCATCGCAGTTTCTGGAAAACGAGGTCAGGAA    240
                     ||||||||||||||.|.||.||.||.|||||||.||||.||||.||||||
BL02807___ycs    188 AAACCAATGTGTGGAGAATTATTGCGGTTTCTGAAAAAAGAGGGCAGGAA    237

BSNT_00712___    241 ATTGCGAATATGGTGCTT-CCCGGACTGGGATATTTCATCGCCATTCTCG    289
                     ||.||.||..|.|| ||| ||.|||||.||.|||||.||||||.||||.|
BL02807___ycs    238 ATCGCCAACCTCGT-CTTACCGGGACTCGGCTATTTTATCGCCTTTCTTG    286

BSNT_00712___    290 TCGTGCTTGGCGGACTAGCTTTTAATATTGGGAATATCGGAGGGGCCGGG    339
                     ||||.||.|||||.||.||.||.||.||.||.|||||||||||.|||||.
BL02807___ycs    287 TCGTTCTGGGCGGGCTTGCCTTCAACATCGGCAATATCGGAGGCGCCGGT    336

BSNT_00712___    340 CTGGGACTTCAGGTGCTGTTCGGCATTACACCTGAAACAGGCGCTTTAAT    389
                     ||.||..|.|||||..|.|||||||||.|.||..|.|..||.||..|.||
BL02807___ycs    337 CTCGGCATGCAGGTTTTATTCGGCATTTCGCCGCAGATGGGAGCCATCAT    386

BSNT_00712___    390 CAGTGCCGTTATCGCCATTTTGATTTTTGTCATCAAGGAAGCAGGAAAAG    439
                     |||.|||||.|||||.||||||||.||||||||.||.|||||.|||||||
BL02807___ycs    387 CAGCGCCGTCATCGCGATTTTGATCTTTGTCATTAAAGAAGCGGGAAAAG    436

BSNT_00712___    440 CGATGGACCGTTTTACGCAAATCGCGGGGTTCGTGATGATTATTTTAACG    489
                     ||||||||||.|||||||..|||||.||.||.||.||||||.|..|.|||
BL02807___ycs    437 CGATGGACCGGTTTACGCTGATCGCAGGCTTTGTCATGATTTTACTGACG    486

BSNT_00712___    490 GTCTACGTTGCGGCGACGACAGCTCCTCCGGTCGGACAGGCAGTCG----    535
                     ||.|||||.||.|..||.||.|..||||||||.||   ||.|| ||    
BL02807___ycs    487 GTGTACGTCGCTGTCACCACCGGACCTCCGGTAGG---GGAAG-CGATAA    532

BSNT_00712___    536 CAAATACATTCGTCCCGGAACACATCAGCATAT-TTGCCATTGTCACCCT    584
                     |.||.||..||.|.||.||..|||| .|..||| ||||.|||.|.||.||
BL02807___ycs    533 CGAAGACGGTCATGCCTGATAACAT-TGATTATCTTGCGATTATAACGCT    581

BSNT_00712___    585 AGTGGGCGGAACCGTCGGCGGTTATATCACATTTGCCGGAGGACACCGTT    634
                     .||.|||||.||.||||||||.||.||.|||||||||||.||||||||.|
BL02807___ycs    582 TGTCGGCGGTACGGTCGGCGGATACATTACATTTGCCGGCGGACACCGAT    631

BSNT_00712___    635 TGCTTGATGCCGGAATTAAAGGGAAGGAATCCATTCCGCAGGTGACAAAA    684
                     ||||||||||.||..|||||||||||||..|.||.||..|.||.||.|||
BL02807___ycs    632 TGCTTGATGCGGGTGTTAAAGGGAAGGATGCGATCCCTGAAGTAACGAAA    681

BSNT_00712___    685 AGCTCGGTTGTCGGCATTTTAATTACATCTGTCATGCGTATCGCTCTTTT    734
                     |||||.|||..|||||||||.||.||.|||||||||.|.||.||.|||||
BL02807___ycs    682 AGCTCTGTTTCCGGCATTTTGATCACGTCTGTCATGAGGATTGCGCTTTT    731

BSNT_00712___    735 TCTTGCGGTTCTAGGCGTTGTATCGAAAGGCCTGCACATCGATGAAAGC-    783
                     .|||||.||.||.|||||.|||||.|||||..||||    |||.||..| 
BL02807___ycs    732 CCTTGCCGTACTTGGCGTCGTATCAAAAGGTATGCA----GATTAATCCG    777

BSNT_00712___    784 ---AACCCGGCGGCTTCTGTCTTCAAGCTGGCTGCTGGAAATGTCGGTTA    830
                        ||.|||.||||.||.||.|||.|||..||.||.|||||||||||.||
BL02807___ycs    778 GATAATCCGCCGGCATCAGTATTCCAGCATGCCGCAGGAAATGTCGGATA    827

BSNT_00712___    831 TAAAATTTTCGGATTGATCATGTGGTCTGCGGCGATTACGTCTGTTATTG    880
                     .|||||.|||||..|..||||||||...||.||.|||||.||.||.||.|
BL02807___ycs    828 CAAAATCTTCGGCCTCGTCATGTGGAGCGCTGCTATTACATCCGTGATCG    877

BSNT_00712___    881 GAGCAGCCTATACATCTGTTTCATTTTTCAAGACCTTTTCTCCAAAAATT    930
                     |.||.||.|||||.||.||.|||||.||.||.||.||||||||.|||||.
BL02807___ycs    878 GTGCTGCTTATACGTCGGTATCATTCTTTAAAACGTTTTCTCCGAAAATC    927

BSNT_00712___    931 GAAAAGAATTCACGCGGTATTATTATCGGATTTATTGTGGTTTCTACG-T    979
                     |||||||||||||||||.|||||.||.|..||||||.|.||.||.||| |
BL02807___ycs    928 GAAAAGAATTCACGCGGCATTATAATTGTCTTTATTATTGTATCAACGCT    977

BSNT_00712___    980 TAGCTTTTGTCACAATCGGCCAGCCTGCGAAGATCCTCGTCCTTGTCGGT   1029
                     |.|| |||||.|||||.||..||||.|..||..|.|||||.||||.|||.
BL02807___ycs    978 TTGC-TTTGTAACAATTGGAAAGCCGGTCAACCTTCTCGTTCTTGCCGGC   1026

BSNT_00712___   1030 TCACTGAACGGCTTAATTCTGCCGATTGCGCTCGGAACGCTGCTTGTT--   1077
                     .||.|.|||||||||||..|||||||.||.||    |.|||.|.|.||  
BL02807___ycs   1027 GCATTAAACGGCTTAATCTTGCCGATCGCACT----AGGCTCCCTTTTAA   1072

BSNT_00712___   1078 --GCCGCCTACAAGAAAAACATTGTCGGTGATTATAAGCATCCGCTTTGG   1125
                       |.|||..|.|||||.||..|..||||.||.||.|.|||||||.|.|||
BL02807___ycs   1073 TCGGCGCACATAAGAAGAATGTCATCGGCGACTACAGGCATCCGATCTGG   1122

BSNT_00712___   1126 CTGACAAGCACAGGCGCGCTTGTAGTGATTGTAATGGCAGTTATGGGAAT   1175
                     ||.||||...|.|||...||.||.||.|||||.|||||..|.||||||..
BL02807___ycs   1123 CTTACAATTCCGGGCATTCTGGTCGTTATTGTCATGGCCATCATGGGAGG   1172

BSNT_00712___   1176 CTACACGTTAATTACACAACTTCCTCAATTGTGGAGCTGA   1215
                     |||.||||||||.|...||.|||||.|.||.|||.|.|||
BL02807___ycs   1173 CTATACGTTAATCAATGAAATTCCTAAGTTATGGGGATGA   1212


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.