Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00796 and BL02805

See Amino acid alignment / Visit BSNT_00796 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_00796___ydcD.1.5803.seq
#    -bsequence dna-align/BL02805___endoAI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00796___ydcD-BL02805___endoAI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00796___ydcD-BL02805___endoAI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00796___ydcD
# 2: BL02805___endoAI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     217/288 (75.3%)
# Similarity:   217/288 (75.3%)
# Gaps:          12/288 ( 4.2%)
# Score: 824.0
# 
#
#=======================================

BSNT_00796___      1 TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAA     50
                     |||||||||||||||||||.|||.|||||....||..|||||||.|||..
BL02805___end      1 TTGTCTGAATCCAGCGCAACAACTGAAATATTGATTCGCTTGCCAGAAGC     50

BSNT_00796___     51 CCTAGTAGCTGAATTGGATGGTGTAGCGATGCGGGAGAAACGAAGCAGAA    100
                     ..|||||.|.|||.||||||||||.|..||||..||.||..|.|||||||
BL02805___end     51 TTTAGTATCAGAACTGGATGGTGTCGTCATGCAAGATAACGGGAGCAGAA    100

BSNT_00796___    101 ACGAACTGATATCACAAGC------AGTGAGAGCATATGTCAGCGAACGA    144
                     |.||||||||.|..|||||      |.||      |||.|..|||||||.
BL02805___end    101 ATGAACTGATTTACCAAGCCACAAAAATG------TATTTACGCGAACGC    144

BSNT_00796___    145 ACAACTCGTCACAACCGTGATTTGATGAGACGCGGCTATATGGAAATGGC    194
                     |.||.|||.||.|..||.||.|.||||||||||||.||||||||.|||||
BL02805___end    145 AAAAATCGACAAATTCGGGAATCGATGAGACGCGGTTATATGGAGATGGC    194

BSNT_00796___    195 GAAAATCAACCTGAATATTTCTTCTGAGGCTCACTTTGCGGAGTGCGAGG    244
                     .||.|||||..||||.||.||||||||||||||.|||||.||||..||||
BL02805___end    195 CAAGATCAATTTGAACATCTCTTCTGAGGCTCAATTTGCAGAGTATGAGG    244

BSNT_00796___    245 CTGAAACGACAGTTGAGCGCTTAGTCAGCGGAGGATAA    282
                     ||||||..|||||.|||||||||||.||||||||||||
BL02805___end    245 CTGAAAACACAGTAGAGCGCTTAGTAAGCGGAGGATAA    282


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