Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00205 and BL02801

See Amino acid alignment / Visit BSNT_00205 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence dna-align/BSNT_00205___rplJ.1.5803.seq
#    -bsequence dna-align/BL02801___rplJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00205___rplJ-BL02801___rplJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00205___rplJ-BL02801___rplJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00205___rplJ
# 2: BL02801___rplJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity:     470/501 (93.8%)
# Similarity:   470/501 (93.8%)
# Gaps:           0/501 ( 0.0%)
# Score: 2226.0
# 
#
#=======================================

BSNT_00205___      1 ATGAGCAGCGCAATTGAAACAAAAAAAGTTGTTGTTGAAGAAATTGCTTC     50
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BL02801___rpl      1 ATGAGCAGCGCAATTGAAACAAAAAAAGTTGTTGTTGAAGAAATTACTTC     50

BSNT_00205___     51 TAAACTGAAAGAAAGTAAATCAACGATCATCGTTGACTATCGCGGACTTA    100
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BL02801___rpl     51 TAAACTGAAAGAAAGTAAATCAACGATCATCGTTGACTATCGCGGCCTTA    100

BSNT_00205___    101 ACGTTTCTGAAGTAACTGAACTTCGTAAACAGCTTCGCGAAGCTAACGTT    150
                     ||||..||||||||||.|||||||||||||||||||||||||||||||||
BL02801___rpl    101 ACGTAGCTGAAGTAACAGAACTTCGTAAACAGCTTCGCGAAGCTAACGTT    150

BSNT_00205___    151 GAGTTCAAAGTTTACAAAAATACGATGACTCGCCGTGCGGTTGAACAAGC    200
                     |||||||||||.||||||||.|||||||||||||||||||||||||||||
BL02801___rpl    151 GAGTTCAAAGTGTACAAAAACACGATGACTCGCCGTGCGGTTGAACAAGC    200

BSNT_00205___    201 TGAGCTTAATGGTTTGAATGATTTCTTAACTGGACCGAACGCGATCGCAT    250
                     |||.|||.||||||||||.|||||||||||.||||||||.|||||.||||
BL02801___rpl    201 TGAACTTGATGGTTTGAACGATTTCTTAACAGGACCGAATGCGATTGCAT    250

BSNT_00205___    251 TCAGCACTGAAGATGTTGTCGCTCCGGCTAAAGTTCTTAATGACTTCGCT    300
                     |||||||||||||||||||||||||.||||||||||||||.||.||.|||
BL02801___rpl    251 TCAGCACTGAAGATGTTGTCGCTCCAGCTAAAGTTCTTAACGAGTTTGCT    300

BSNT_00205___    301 AAAAATCACGAAGCTCTTGAAATCAAAGCTGGCGTTATCGAAGGTAAAGT    350
                     |||||.|||||||||||||||||||||||.|||||.||||||||.|||||
BL02801___rpl    301 AAAAAGCACGAAGCTCTTGAAATCAAAGCGGGCGTAATCGAAGGCAAAGT    350

BSNT_00205___    351 TTCTACTGTTGAAGAAGTGAAAGCTCTTGCTGAACTTCCATCACGCGAAG    400
                     .||.||.|||||||||||||||||||||||||||||||||||.|||||||
BL02801___rpl    351 GTCCACAGTTGAAGAAGTGAAAGCTCTTGCTGAACTTCCATCTCGCGAAG    400

BSNT_00205___    401 GCTTGCTTTCTATGTTGCTTAGCGTACTTCAAGCTCCAGTTCGCAACCTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BL02801___rpl    401 GCTTGCTTTCTATGTTGCTTAGCGTACTTCAAGCTCCAGTTCGCAATCTT    450

BSNT_00205___    451 GCTTTTGCTGCAAAAGCTGTGGCAGAACAAAAGGAAGAACAAGGCGCTTA    500
                     |||.||||..|.||||||||.|||||||||||||||||||||||||||||
BL02801___rpl    451 GCTCTTGCAACTAAAGCTGTTGCAGAACAAAAGGAAGAACAAGGCGCTTA    500

BSNT_00205___    501 A    501
                     |
BL02801___rpl    501 A    501


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