Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03398 and BL02794
See
Amino acid alignment /
Visit
BSNT_03398 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03398___seaA.1.5803.seq
# -bsequence dna-align/BL02794___seaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03398___seaA-BL02794___seaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03398___seaA-BL02794___seaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03398___seaA
# 2: BL02794___seaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 932
# Identity: 662/932 (71.0%)
# Similarity: 662/932 (71.0%)
# Gaps: 70/932 ( 7.5%)
# Score: 2218.5
#
#
#=======================================
BSNT_03398___ 1 ATGAGTGATTACATCTATCCGATTATTGCTGGGGTCATT---GCCGGAAT 47
|||||..|.||.|..||||||||.|| ||.||| .||| ||.||.||
BL02794___sea 1 ATGAGCCAATATACTTATCCGATCAT--CTTGGG-AATTGTCGCAGGTAT 47
BSNT_03398___ 48 TG-CGACA-AGGCTTTATATGCTGAAAACGGATTACCGCCAGTATCCGAC 95
|| .|.|| || |.||||||||...|||.||.|||||||||||.||.||
BL02794___sea 48 TGTTGTCAGAG--TATATATGCTCCGAACCGACTACCGCCAGTACCCCAC 95
BSNT_03398___ 96 CTATGTTCATGGGAAAGTGATTCACATCGCACTGGGGTTGATAGCGGCTG 145
.|||.|||||||||||..|||.||.||.||.||||..|||||.||.||..
BL02794___sea 96 TTATCTTCATGGGAAAACGATACATATTGCGCTGGCTTTGATCGCTGCCA 145
BSNT_03398___ 146 GTTTAGGTGCAATTATTATGCCGGCGCTTTTGCAGGAGGAATTTACGGCC 195
|..|.||.||.||.|||||.|||.|..|.|||.|...|||.|.|||.||.
BL02794___sea 146 GCATTGGCGCGATCATTATTCCGTCAATCTTGAAATCGGATTATACAGCG 195
BSNT_03398___ 196 ATCACATTTTTAACATTGGCAGCGACGCAATTTAGAGATGTCCGAAACAT 245
||.||.||||||||..||||.||.||.|||||.||.||||||||.|||||
BL02794___sea 196 ATTACGTTTTTAACGCTGGCTGCAACCCAATTCAGGGATGTCCGGAACAT 245
BSNT_03398___ 246 GGAGCGGAACACATTGACGCAAATGGATTCG--TATGAACTTGTCTCAAG 293
|||.|||.|.|||||||||||..|.|| || ||||||||.||.|||||
BL02794___sea 246 GGAACGGGAAACATTGACGCAGCTTGA--CGGCTATGAACTCGTTTCAAG 293
BSNT_03398___ 294 GGGAAGCACATATATTGAGGGGATTGCCATTGCGTTTGAAAGCAGAAATT 343
.||.|||||.|||||.||.||.||.||.||.||.|||||||||||.||||
BL02794___sea 294 AGGCAGCACGTATATCGAAGGAATCGCGATCGCCTTTGAAAGCAGGAATT 343
BSNT_03398___ 344 ATATTGTGATCTTTACAGCGCTTTTGACAACCTCT-GCGTA---TGTGTT 389
|.|||||.||.||||||.||||..||||.||| || ||.|| |.||||
BL02794___sea 344 ACATTGTCATTTTTACATCGCTCCTGACGACC-CTCGCATACATTCTGTT 392
BSNT_03398___ 390 TTTATCCATCTGGGC------TGCTGTCATAGCGGCTGTCGTTTGTTTT- 432
||.|||..|.||||| |||| ||.|||.|..|.||||||
BL02794___sea 393 TTCATCGGTATGGGCAGGCCTTGCT------GCTGCTTTGATCTGTTTTA 436
BSNT_03398___ 433 TTACTGGCTATGAA-GTTTATGTCGGGCAG-TGTGTTGAAGGATATTGTA 480
|..|.||| .||| .||.|||||.||.|| |.|.|| ||||||||.|..
BL02794___sea 437 TCGCGGGC--AGAATCTTAATGTCCGGAAGCTTTATT-AAGGATATCGCC 483
BSNT_03398___ 481 GATATCGAGTACATAAAGCCGCGCTTTGACGGTCCGGGACTGTTTGTTGA 530
|||||.|||||.|.||||||.|..|||||.||..|.|||||.|.|||.||
BL02794___sea 484 GATATAGAGTATAAAAAGCCTCATTTTGAAGGGGCCGGACTTTATGTCGA 533
BSNT_03398___ 531 TAATATTTATATGATGAATATCGGGCTTCCAGAGAAACAGGAA-CTGATT 579
.||||||||.||.|||||||||||||||||.|| |||..|||| ||||||
BL02794___sea 534 CAATATTTACATTATGAATATCGGGCTTCCCGA-AAAGCGGAAGCTGATT 582
BSNT_03398___ 580 TTAAAGCATGGCATGGGCTTTATTTTGACGCCGAAAAACTTTAATTCAGC 629
||..|.||.||||||||.||||||||||.|||||||||.||||||||.||
BL02794___sea 583 TTGGAACACGGCATGGGGTTTATTTTGAAGCCGAAAAATTTTAATTCCGC 632
BSNT_03398___ 630 AGCGACGATAGCAAATTTAGGGCAGCGTCAGGCCATTTTATTTGATGTTT 679
||..|||||.||.|||.|.|||||..|.||.||.|||||||||||.||||
BL02794___sea 633 AGTAACGATTGCCAATCTCGGGCAAAGACAAGCGATTTTATTTGACGTTT 682
BSNT_03398___ 680 CCAATGTGCTCGGGGTTTATCGGGATTCAGGAGAACCATCTTTGACACCA 729
|.|||||||||||.||.|||||.|||||.||||||||.|||.|..|.||.
BL02794___sea 683 CAAATGTGCTCGGCGTGTATCGAGATTCTGGAGAACCCTCTCTTTCGCCG 732
BSNT_03398___ 730 ATTGCAAAACGGGATTTAAATGATGGGAGAGTGGCAGTATTTGTTCTTCC 779
.||||.|||.|||||||.|||||.|||.|.||.||.||.|||||.|||||
BL02794___sea 733 CTTGCGAAAAGGGATTTGAATGACGGGCGGGTCGCGGTTTTTGTCCTTCC 782
BSNT_03398___ 780 G-----------CAAATTCACCATCCCGAAACGGCTGTTCA-AATTATTA 817
| |||| ||.||||| |.||| ..|.||..
BL02794___sea 783 GGTCATCAAGGACAAA-----------GAGACGGC-GATCAGGGTCATCG 820
BSNT_03398___ 818 GCAATGTTCCAACCCTGGAAAATGCGATTAGAATGCCGACTGAATTTA-T 866
||.|||||||.||.||||||||.||.||..|..|.||||..|||||.| |
BL02794___sea 821 GCGATGTTCCGACGCTGGAAAACGCCATCCGCGTACCGATGGAATTCATT 870
BSNT_03398___ 867 CAAGAA----TCAGGATAAGGTGATAGGATGA 894
.||||| .||| .|||||||||..||||
BL02794___sea 871 AAAGAAAAGCACAG--CAAGGTGATAAAATGA 900
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.