Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03395 and BL02792
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03395___engA.1.5803.seq
# -bsequence dna-align/BL02792___engA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03395___engA-BL02792___engA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03395___engA-BL02792___engA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03395___engA
# 2: BL02792___engA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1317
# Identity: 1049/1317 (79.7%)
# Similarity: 1049/1317 (79.7%)
# Gaps: 12/1317 ( 0.9%)
# Score: 4139.0
#
#
#=======================================
BSNT_03395___ 1 ATGGGTAAACCTGTCGTAGCCATTGTCGGGAGACCAAATGTAGGAAAATC 50
|||||.|||||||||||||||||.||.||.|||||.|||||.||.||.||
BL02792___eng 1 ATGGGAAAACCTGTCGTAGCCATAGTTGGAAGACCCAATGTGGGGAAGTC 50
BSNT_03395___ 51 CACAATCTTTAACCGGATTGCGGGAGAAAGAATTTCAATAGTAGAAGATA 100
|||.|||||||||.||||.|||||.|||||||||||.||.||.|||||||
BL02792___eng 51 CACGATCTTTAACAGGATCGCGGGCGAAAGAATTTCGATTGTGGAAGATA 100
BSNT_03395___ 101 CCCCTGGCGTGACAAGGGATCGGATATACAGCTCGGCTGAATGGCTGAAT 150
|.|||||||||||..|||||||||||||||||||.||.||.|||||||||
BL02792___eng 101 CACCTGGCGTGACGCGGGATCGGATATACAGCTCTGCCGAGTGGCTGAAT 150
BSNT_03395___ 151 TATGATTTTAATTTGATTGATACGGGCGGTATTGATATCGGTGATGAGCC 200
.|.||.||.||..||||||||||.|||||.||.||..||||.||||||||
BL02792___eng 151 CACGACTTCAACCTGATTGATACAGGCGGAATCGAAGTCGGCGATGAGCC 200
BSNT_03395___ 201 GTTCTTAGCGCAGATTCGCCAGCAGGCTGAAATCGCCATGGATGAAGCGG 250
|||.||.||||||||||||||.|||||.||.|||||||||||.|||||.|
BL02792___eng 201 GTTTTTGGCGCAGATTCGCCATCAGGCCGAGATCGCCATGGAAGAAGCAG 250
BSNT_03395___ 251 ACGTGATTATTTTTATGGTGAACGGCCGTGAAGGTGTGACAGCTGCTGAT 300
|.|||||||||||.|||..|||||||||.|||||.||.|||||.||||||
BL02792___eng 251 ATGTGATTATTTTCATGACGAACGGCCGCGAAGGCGTCACAGCCGCTGAT 300
BSNT_03395___ 301 GAAGAAGTGGCGAAAATTTTGTACCGCACAAAAAAGCCTGTTGTTTTAGC 350
|||||||||||.||||||||.|||||.||||||||.||.||.|||.|.||
BL02792___eng 301 GAAGAAGTGGCAAAAATTTTATACCGTACAAAAAAACCCGTCGTTCTGGC 350
BSNT_03395___ 351 GGTTAATAAACTGGATAACACAGAAATGAGAGCGAATATTTATGATTTTT 400
||||||||||.|||||||..|.|||||||||||.||.|||||.|||||||
BL02792___eng 351 GGTTAATAAAGTGGATAATCCTGAAATGAGAGCAAACATTTACGATTTTT 400
BSNT_03395___ 401 ATTCGCTAGGCTTTGGCGAGCCGTATCCAATTTCGGGAACACACGGACTC 450
||.|.||.||||||||||||||||..||.|||||.||.||.||.||.||.
BL02792___eng 401 ATGCCCTCGGCTTTGGCGAGCCGTTCCCGATTTCAGGGACGCATGGCCTT 450
BSNT_03395___ 451 GGACTGGGTGATTTACTGGATGCCGTTGCA--GAGCATTTTAAAAACATT 498
||.||.||.|||.|.||.||.||.|| || ||.||||||||||||||.
BL02792___eng 451 GGTCTCGGCGATCTGCTTGACGCGGT--CAGCGAACATTTTAAAAACATA 498
BSNT_03395___ 499 CCAGAAACGAAATACAATGAGGAAGTTGTTCAATTCTGTCTGATCGGACG 548
||.||.|||||.||..|.||.|||||.||||||||.||.||.|||||.||
BL02792___eng 499 CCCGAGACGAAGTATGAGGATGAAGTCGTTCAATTTTGCCTCATCGGCCG 548
BSNT_03395___ 549 TCCGAATGTCGGAAAGTCTTCACTTGTGAATGCGATGCTCGGCGAAGAAC 598
.|||||.||||||||.||.||.|||||.||.||.|||.|.||.|||||.|
BL02792___eng 549 GCCGAACGTCGGAAAATCCTCCCTTGTAAACGCCATGATTGGAGAAGAGC 598
BSNT_03395___ 599 GCGTTATTGTCAGCAACGTGGCTGGAACGACAAGAGATGCTGTTGATACG 648
|||||||.||||||||..|.||.||||||||..|.||.||..||||.|||
BL02792___eng 599 GCGTTATCGTCAGCAATATTGCGGGAACGACGCGCGACGCCATTGACACG 648
BSNT_03395___ 649 TCATTTACTTACAACCAGCAGGAG--TTTGTCATTGTCGATACTGCAGGT 696
...|||||.|||||.|| |.||| ||||||||.||.|||||.||.||.
BL02792___eng 649 AGGTTTACATACAATCA--AAGAGACTTTGTCATCGTGGATACAGCCGGG 696
BSNT_03395___ 697 ATGCGAAAAAAAGGGAAAGTCTATGAAACGACTGAGAAGTATAGTGTACT 746
|||.|||||||.||||||||.|||||..|.|||||.||.||.||.||.||
BL02792___eng 697 ATGAGAAAAAAGGGGAAAGTGTATGAGGCAACTGAAAAATACAGCGTCCT 746
BSNT_03395___ 747 GCGGGCGCTAAAAGCGATTGACCGCTCAGAAGTCGT-GGCGGTTGTGCTG 795
.||.||..||||.|||||.|||||.||||||||||| .|| ||.||..||
BL02792___eng 747 CCGAGCTTTAAAGGCGATCGACCGTTCAGAAGTCGTCTGC-GTCGTCTTG 795
BSNT_03395___ 796 GATGGCGAAGAAGGCATTATTGAACAGGACAAGCGTATCGCCGGTTATGC 845
||.||||||||||||||||||||.|||||||||||.||.|||||.|||||
BL02792___eng 796 GACGGCGAAGAAGGCATTATTGAGCAGGACAAGCGGATTGCCGGCTATGC 845
BSNT_03395___ 846 ACACGAAGCGGGCAAGGCCGTCGTCATCGTCGTAAACAAATGGGATGCTG 895
.||.|||||.||.||.||.||.||||||||||||||||||||||||||.|
BL02792___eng 846 GCATGAAGCAGGAAAAGCTGTTGTCATCGTCGTAAACAAATGGGATGCAG 895
BSNT_03395___ 896 TTGACAAAGATGAGAGCACAATGAAAGAATTTGAAGAAAATATTCGCGAT 945
|.||.|||||.|||.|.||.||||||||||||||||||||..||.|.||.
BL02792___eng 896 TCGAAAAAGACGAGCGGACGATGAAAGAATTTGAAGAAAAGGTTAGAGAC 945
BSNT_03395___ 946 CATTTTCAATTTCTGGATTATGCGCCAATCCTATTTATGTCTGCCTTAAC 995
||.|||||||||.||||.||.|||||..|..|.||||||||.||.||.||
BL02792___eng 946 CACTTTCAATTTTTGGACTACGCGCCTGTTTTGTTTATGTCCGCTTTGAC 995
BSNT_03395___ 996 GAAAAAACGGATCCATACGCTGATGCCTGCGATTATTAAAGCAAGTGAAA 1045
.|||||.||.|||||||||||||||||||||.|.||.|..||.||.||||
BL02792___eng 996 TAAAAAGCGCATCCATACGCTGATGCCTGCGGTCATGACGGCGAGCGAAA 1045
BSNT_03395___ 1046 ATCATTCACTTCGAGTTCAGACGAA-CGTCTTAAATGATGTCATCATGGA 1094
|.|||||..|..|.||.|||||.|| ..|||| ||||||.||||.|||||
BL02792___eng 1046 ACCATTCGATGAGGGTGCAGACCAATATTCTT-AATGATATCATTATGGA 1094
BSNT_03395___ 1095 TGCTGTGGCAATGAACCCGACACCGACTCATAACGGTTCTCGTTTGAAAA 1144
|||.|||||.|||||||||||.|||||.|||||.||....||.||.||||
BL02792___eng 1095 TGCGGTGGCTATGAACCCGACGCCGACGCATAATGGAAACCGGTTAAAAA 1144
BSNT_03395___ 1145 TTTACTATGCGACTCAAGTGTCGGTAAAGCCGCCAAGCTTCGTTGTGTTT 1194
||||.||||||||.||||||.|.||.||||||||.|..||.||.||.|||
BL02792___eng 1145 TTTATTATGCGACACAAGTGGCTGTGAAGCCGCCGACATTTGTCGTATTT 1194
BSNT_03395___ 1195 GTAAACGATCCGGAATTGATGCATTTTTCATACGAACGGTTTTTAGAAAA 1244
||.||.||.||.||..|||||||||||||.||||||||.|||||.|||||
BL02792___eng 1195 GTCAATGACCCTGAGCTGATGCATTTTTCTTACGAACGCTTTTTGGAAAA 1244
BSNT_03395___ 1245 CCGAATCAGAGACGCGTTCGGTTTTGAGGGGACACCAATCAAAATATTTG 1294
|||.||..|.|||||.|||||.|||||.||.||||||||||..||.||.|
BL02792___eng 1245 CCGGATACGCGACGCCTTCGGATTTGAAGGAACACCAATCAGGATTTTCG 1294
BSNT_03395___ 1295 CAAGAGCTAGAAAATAA 1311
|||||||.|||||||||
BL02792___eng 1295 CAAGAGCAAGAAAATAA 1311
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