Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03393 and BL02790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence dna-align/BSNT_03393___yphE.1.5803.seq
# -bsequence dna-align/BL02790.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03393___yphE-BL02790.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03393___yphE-BL02790.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03393___yphE
# 2: BL02790
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 151/211 (71.6%)
# Similarity: 151/211 (71.6%)
# Gaps: 14/211 ( 6.6%)
# Score: 497.5
#
#
#=======================================
BSNT_03393___ 1 TTGAATCTGGCATTGATGAAAATGTGGTTTGCACTAGGG-TCCATGGGTC 49
.|||||.|.|...||.|.|||||||||||||| ||.||| ||.|||||.|
BL02790 1 GTGAATGTCGGTCTGTTAAAAATGTGGTTTGC-CTTGGGATCAATGGGCC 49
BSNT_03393___ 50 TGATGTTTCTGGCTGTAGCTT-CCATCTATTTAAGCCGCTTTAAGTGCCA 98
|||||||..|.||.|| |.|| ||||.||..|||||.|.|.|||.|...|
BL02790 50 TGATGTTCTTAGCGGT-GATTGCCATATACATAAGCAGATATAAATTTAA 98
BSNT_03393___ 99 AAACCGTTTTTTGAAGATTACGATTTCA--TCAT---TCGCATACATGTG 143
||||||||||||.||.|||| ||| ||.| ||||.||||..||
BL02790 99 AAACCGTTTTTTAAAAATTA-----TCACGTCGTTTGTCGCCTACACATG 143
BSNT_03393___ 144 TATGCTCATATCTGGAATTATTGTGTTTGTCGTGGTTTTTAGCGGCCCTG 193
|||||||||.||.||..|.||.||.|||.|.||.||.||.||||||||.|
BL02790 144 TATGCTCATCTCCGGCGTGATCGTCTTTTTTGTCGTCTTCAGCGGCCCCG 193
BSNT_03393___ 194 TCAATGAATAA 204
||||.||||||
BL02790 194 TCAACGAATAA 204
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