Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03388 and BL02787

See Amino acid alignment / Visit BSNT_03388 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:19
# Commandline: needle
#    -asequence dna-align/BSNT_03388___hbs.1.5803.seq
#    -bsequence dna-align/BL02787___hbs.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03388___hbs-BL02787___hbs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03388___hbs-BL02787___hbs.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03388___hbs
# 2: BL02787___hbs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     255/279 (91.4%)
# Similarity:   255/279 (91.4%)
# Gaps:           0/279 ( 0.0%)
# Score: 1179.0
# 
#
#=======================================

BSNT_03388___      1 ATGAACAAAACAGAACTTATCAATGCGGTTGCTGAAGCAAGCGAATTGTC     50
                     ||||||||.||||||||.||||||||||||||.||||||||||||.|.||
BL02787___hbs      1 ATGAACAAGACAGAACTAATCAATGCGGTTGCAGAAGCAAGCGAACTATC     50

BSNT_03388___     51 TAAAAAAGACGCTACAAAAGCAGTTGACTCTGTTTTTGATACGATCTTAG    100
                     |||||||||||||||.|||||||||||.||||||||||||||.||.||||
BL02787___hbs     51 TAAAAAAGACGCTACTAAAGCAGTTGATTCTGTTTTTGATACAATTTTAG    100

BSNT_03388___    101 ATGCACTTAAAAACGGTGATAAAATCCAACTGATCGGTTTTGGTAACTTC    150
                     |||||||||||||||||||.|||||.|||.|||||||||||||||||||.
BL02787___hbs    101 ATGCACTTAAAAACGGTGAAAAAATTCAATTGATCGGTTTTGGTAACTTT    150

BSNT_03388___    151 GAGGTGCGTGAACGTTCTGCACGTAAAGGACGCAACCCTCAAACAGGTGA    200
                     |||||.|||||.||.||.||.||||||||||||||.||||||||||||||
BL02787___hbs    151 GAGGTTCGTGAGCGCTCAGCTCGTAAAGGACGCAATCCTCAAACAGGTGA    200

BSNT_03388___    201 AGAAATCGAAATTCCAGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250
                     ||||||||||||.||.||||||||||||||||||||||||||||||||||
BL02787___hbs    201 AGAAATCGAAATCCCTGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250

BSNT_03388___    251 CGCTTAAAGACGCAGTTGCCGGAAAATAA    279
                     |||||||||||||.||.||.|||||||||
BL02787___hbs    251 CGCTTAAAGACGCTGTAGCAGGAAAATAA    279


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