Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03381 and BL02782

See Amino acid alignment / Visit BSNT_03381 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:19
# Commandline: needle
#    -asequence dna-align/BSNT_03381___hepT.1.5803.seq
#    -bsequence dna-align/BL02782___hepT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03381___hepT-BL02782___hepT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03381___hepT-BL02782___hepT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03381___hepT
# 2: BL02782___hepT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 986
# Identity:     717/986 (72.7%)
# Similarity:   717/986 (72.7%)
# Gaps:          46/986 ( 4.7%)
# Score: 2527.5
# 
#
#=======================================

BSNT_03381___      1 ATGAAATTTAAAATGGCCTACTCTTTTTTAAATGACGATATTGATGTAAT     50
                     ||||||||.|.||.|...||.||||||||.||||||||||||||..||||
BL02782___hep      1 ATGAAATTGACAACGTTTTATTCTTTTTTGAATGACGATATTGAATTAAT     50

BSNT_03381___     51 CGAAAGAGAACTTGAACAAACCGTACGTTCCGATTACCC---GCT--TTT     95
                     .||||.|||.||||||.|.|||||.|..|||||.||.||   |||  .|.
BL02782___hep     51 AGAAAAAGAGCTTGAAAAGACCGTGCACTCCGACTATCCATTGCTCAGTG    100

BSNT_03381___     96 AAGCGAGGCAGGTCTTCACCTGCTGCAGGCCGGAGGGAAACGTATTCGTC    145
                     ||||||     |.||.||..||||||||||||||||.||..|.|||||||
BL02782___hep    101 AAGCGA-----GCCTGCATTTGCTGCAGGCCGGAGGCAAGAGGATTCGTC    145

BSNT_03381___    146 CTGTTTTCGTGCTGCTTTCTGGCATGTTTGGCGATTACGATATTAATAAG    195
                     |.||.||.||.||||||||.||||||||.|||||.|||||.||.|..||.
BL02782___hep    146 CCGTGTTTGTCCTGCTTTCCGGCATGTTCGGCGAATACGACATCAGCAAA    195

BSNT_03381___    196 ATTAAATATGTCGCCGTCACTCTGGAAATGATTCACATGGCATCTTTGGT    245
                     ||||||.||||.|||||..|..|||||.||||.||.|||||.||..|.||
BL02782___hep    196 ATTAAAAATGTTGCCGTTTCGTTGGAATTGATACATATGGCTTCGCTCGT    245

BSNT_03381___    246 TCATGATGATGTCATTGATGATGCAGAGCTTCGCCGAGGAAAACCGACAA    295
                     .||.||.||||||||.||||||||.|||||..|..|||||.|.|||||||
BL02782___hep    246 ACACGACGATGTCATCGATGATGCGGAGCTGAGAAGAGGACAGCCGACAA    295

BSNT_03381___    296 TCAAAGCAAAGTGGGACAATCGTATTGCGATGTACACAGGCGATTATATG    345
                     |||||||.||||||||.||.||.|||||.|||||.|||||.||||||.||
BL02782___hep    296 TCAAAGCGAAGTGGGATAACCGGATTGCAATGTATACAGGTGATTATTTG    345

BSNT_03381___    346 CTTGCGGGATCTCTTGAAATGATGACGAGAATTAACGAACCGAAAGCCCA    395
                     .|.||..|.||.||||||..||||||.|.|||.|||||||||||||||||
BL02782___hep    346 TTCGCTCGCTCACTTGAAGCGATGACAAAAATAAACGAACCGAAAGCCCA    395

BSNT_03381___    396 TAGGATTTTGTCACAGACGATCGTTGAAGTTTGTCTAGGGGAAATTGAGC    445
                     |...||.|||||..||.||||.||.|||||.|||||.||.||||||||.|
BL02782___hep    396 TGAAATCTTGTCCAAGGCGATTGTCGAAGTCTGTCTTGGAGAAATTGAAC    445

BSNT_03381___    446 AGATCAAAGACAAATATAACATGGAACAAAATCTCAGAACGTATCTCCGC    495
                     |.||.|||||.||||||||.|||||.||||||||||||||.|||.|..|.
BL02782___hep    446 AAATTAAAGATAAATATAATATGGAGCAAAATCTCAGAACCTATTTGAGA    495

BSNT_03381___    496 CGTATCAAAAGAAAAACAGCTCTCTTGATCGCGGTC-AGCTGCCAGCTTG    544
                     .|.||||...|.||.|||||.||..|.||||| ||| |||||||||||||
BL02782___hep    496 AGAATCAGGCGCAAGACAGCACTTCTAATCGC-GTCGAGCTGCCAGCTTG    544

BSNT_03381___    545 GTGCCATTGCGTCTGGAGCTGATGAGAAGATTCATAAGGCATTGTACTGG    594
                     |.||||||||..||||.||.|.|||.||.||||||||..|.|||||||||
BL02782___hep    545 GAGCCATTGCTGCTGGTGCGGGTGAAAACATTCATAAAACGTTGTACTGG    594

BSNT_03381___    595 TTTGGGTATTACGTCGGCATGTCTTATCAGATTATTGATGATATTCTTGA    644
                     |||||.|||||.|||||||||||.|||||.|||||||||||.||.||.||
BL02782___hep    595 TTTGGCTATTATGTCGGCATGTCCTATCAAATTATTGATGACATCCTCGA    644

BSNT_03381___    645 TTTTACTTCAACTGAAGAAGAGCTGGGTAAACCCGTTGGAGGAGATTTGC    694
                     |||.||.||||..|||.|||||||.||.||.||.||.||..|.|||.|||
BL02782___hep    645 TTTCACCTCAAGCGAAAAAGAGCTTGGCAAGCCTGTGGGCAGCGATCTGC    694

BSNT_03381___    695 TTCAAGGAAACGTCACATTGCCAGTGCTGTATGCCCTGAAAAATCCTGCA    744
                     ||||.||.||.|||||..|.||.||..|.|||||.|.||||...||||..
BL02782___hep    695 TTCAGGGGAATGTCACGCTTCCCGTATTATATGCACGGAAATCGCCTGAG    744

BSNT_03381___    745 TTAAAAAACCAGCTTAAATTGATTAACAGTGAGACAACGCAGGAGCAGCT    794
                     .|||||...|..||.|...||.|.||||||||.||.||.|..||.|||.|
BL02782___hep    745 CTAAAAGCGCGCCTGATGCTGGTCAACAGTGAAACCACTCCAGAACAGAT    794

BSNT_03381___    795 TGAACCAATCATTGAAGAAATCAAAAAAACAGATGCAATTGAAGCATCTA    844
                     ..|.|||.|.||.|||||..|.||.|||||.|||||.||||||..|||..
BL02782___hep    795 CAAGCCAGTGATCGAAGAGCTGAAGAAAACGGATGCCATTGAACAATCGT    844

BSNT_03381___    845 TGGCA--GTAAGCGAAATGTATCTGCAGAAAGCTTTTCAGAA---ATTAA    889
                     |  ||  ||.||.|||||||||.|..|.||.|||||  .|||   .||.|
BL02782___hep    845 T--CAGGGTCAGTGAAATGTATTTAAACAAGGCTTT--CGAACTGCTTGA    890

BSNT_03381___    890 ACACGCTTCCACGA------GGGCGCGCACGCTCGTCTCTTGCA----GC    929
                     | |||||  |.|||      |||||||.|||          |||    ||
BL02782___hep    891 A-ACGCT--CCCGAAAAACCGGGCGCGGACG----------GCACTGGGC    927

BSNT_03381___    930 C--ATCGCAAAATATATCGGTAAAAGAAAATTTTAA    963
                     |  ||.||.|||||.|||||.||..||||.||.|||
BL02782___hep    928 CAAATTGCGAAATACATCGGCAAGCGAAAGTTCTAA    963


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03381 and BL02782

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
